Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ---------->DOF2                                                                         --------->TOE2(3)                                                                         ----------->RAV1(1)                                                                         ------->GAMYB                                                                         ============================                                                                        <---------MYB55(2)                                                                       ------>MYB83        --------->YAB1                                                 -------->P        -------->HAHB4                                                 ------>MYB46(1)        <---------ICU4                                                --------->MYB55(1)     <---------ICU4                                                  <---------MYB111(2)     --------->YAB1                                                  <---------MYB46(2)    --------->AHL20(2)                                               <---------MYB55(2)    <---------AHL20(2)                                               --------->DEAR3(1)    --------->ICU4                                                   --------->MYB46(3)    <---------ATHB51                                                 <---------MYB111(1)  --------->YAB1                                                     --------->AtMYB61 -------->AHL20(2)                                               <---------ZAT14 ---->ANAC46                                    ------>MYB46(1)  --------->ZAT18 ---->ANAC58                                    ------>MYB83     <---------ZAT18                  --- ---->ANAC58                                  <---------MYB59 <---------ANAC58                <------ >MYB46(1)                                    <---------MYB46(2) --------->ZAT14             -------- >MYB83--------->ICU4                      <-----------GT1    <---------ANAC58          <------ZmHOX2a(1) ->TOE1(2)      --------->MYB52(1)     --------->AHL20(2)     <---------ANAC46  <------ZmHOX2a(1) --- ->TOE2(2)<---------YAB1               <---------AHL20(2)   ------->TEIL--------->MYB46(3) <---------   gaaaaaataattatgaattaactgatacaaatagaaagtttttaattaccaaacttcgaatgtatcgtgcaccaaccacaaaggactagaggaccaggtc  1063800 ==RAV    <---------TOE2(2) ------>At4g35610 -----HVH21                                                                     --------->ZAT6      < ->bZIP60(2)                --------------->AGL15                         <---------At4g35610       < ------>ICU4    --------->AtLEC2                             --------------->AtSPL8      --------->ARR11(3) --RAV1(2)<---------TOE1(2) <---------------AGL15<----------DOF2          --------->At4g35610 -------   agcattaactcataggttatgcaaaaatttctataatttgtcaattcccaactttcattttccttcgtacattatcagatgaacactaaaacatattgat  1063900                                                                                                 ----                                                                                               <-----                                                                                            <--------                                                                                         <-----------                                                                                      --------->AHL20(2)                                                                                      --------->AHL20(1)                                                                                      <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                               <----------DOF2    --------->ATHB51                      <---------ICU4                     <---------ARR14(2)       <--------HAHB4 ----            --------->ZAT18                              --------->ARR14(2)       <---------ICU4 ----   <---------YAB1    <---------YAB1                  <---------WOX13(1)           --------->YAB1----- <----------DOF2     --------->ICU4                <---------AHL20(2)            --------->AHL20(2) ---------ANAC58   --------->YAB1                  --------->ATHB12              --------->ICU4<----- ---------ANAC58  <---------YAB1                  <---------AHL20(2)           --------->YAB1  ------ -->ATHB12  <---------ZAT14                       --------->AHL20(2)         <---------TOE2(3) <-----   ttgcttttattgagtctactaccattatggtctcacgatgaaatcacgactattaattggttctgcttttattttgactaagaataattaaattgtacca  1064000                  <---------------AGL15            --------->YAB1           <---------AHL20(2) ----->MYB52(1)   --------------->AGL15 ----MYB46(2)    <-----------------AGL3 ---GT1--------->AHL20(2) ----AtSPL8<---------ATHB51               ----------->GT1 -->MYB83  --------->AHL20(2)           ---------->DOF2 -->MYB46(1)<---------ICU4  ----------->RAV1(1) <----------ID1 ---->MYB55(1)   <---------YAB1     <----------ID1                                            ------- ----MYB59 --------->ICU4  <----------ID1 <----------ID1                                      <------ --->MYB46(3)  <-----------GT1     ------------------------>ANAC81                            <------ ----MYB111(1) --------->YAB1     ---------->DOF2                    <-------TEIL           ---------   aacgataaatgaaataattacaatttttagcaacaaaaaagaaaaagaaaaaaacaaatgttgagaccatatacatttttggagtttggacactgagatt  1064100     <---------ANAC58      <---------ARR14(2)     <---------ANAC58      --------->ARR14(2)   --------->GLK1(2)    --------->ANAC46  <---------GLK1(2)     --------->TOE1(1)                                       <---------ARR11(3)  <---------ARR14(2)   <---------LBD16                          <---------AHL20(2)  --------->ARR14(2)  --------->TOE2(2)                         --------->AHL20(2)              ----- -->ARR11(3)          --------->TOE1(2)                <-----------GT1          --------->ARR11(3) ---ARR11(3)   <-------GAMYB                           --------->ZAT6--------->YAB1             <---- ---GLK1(2)   <---------MYB46(3)                  <----------DOF2  <---------YAB1         --------->At4g35610 -->ARR10     ----------->GT1                <---------AtMYB61<----------DOF2  <---------CCA1(2)<----   ttcagattcttgtctgtggttaaacctcggaaccagagagagatggtatggtctttatcactctcttttattaataaactcatatctctctcatctaaaa  1064200                                  <<<<<<<<<TBF1                            <<<<<<<<<TBF1                         <<<<<<<<<TBF1                      <<<<<<<<<TBF1                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <-     <------------------------ANAC81    <<<<<<<<<TBF1                                             <--  <---------CCA1(2)<<<<<<<<<TBF1 *TSS<<<<<<<<<TBF1                                    ----------->GT1 ---->ARR11(3)  <<<<<<<<<TBF1  <<<<<<<<<TBF1    ------>ZmHOX2a(1)                    ----------->GT1 -------ARR10<<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                     <------ZmHOX2a(1) -----ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <----------DOF2        <---------ANAC46     <--   tctcatctcttcttcttcttcttcttcttcttcttcttcttcttcttctcctctgtctttgaagctatcttcttggattgtgtttaggagttaaaaactt  1064300                                                             --------->ANAC58                                                        ------>MYB83                                                        ------>MYB46(1)         --------->YAB1                               --------->AtMYB61         <---------ICU4                               <---------MYB46(2)        <---------ATHB12                              <---------MYB111(1)      --------->WOX13(1)                              <---------MYB111(2) <---------AtMYB61                                 ------->GAMYB                 <---------YAB1 ---------DOF2                                    --------->MYB46(3)<---------DAG2-------->HAHB4 <--- -------ANAC58     <---------ANAC58             <-----------GT1     <----------DOF2<---------GLK1(2) -------ANAC58     <---------ANAC58          <----------DOF2 --------->ANAC58    --------->ICU4  <---   gctttggtccatcatgagattgcttcttagtctcttgtttctcttggctttaaccacctactcaagtaagctttttgttcaaaatgattctctgttcttg  1064400                                                                                     <------ZmHOX2a(2)                                                                                    --------->ARR14(2)                                                                                    <---------ARR11(3)                                                                                    --------->AGP1                                                                                    --------->ARR14(3)                                                                                    <---------ARR14(2)                                                                                    --------->ARR11(3)                                                                                  ----------->ARR10               ------>MYB83<----------DOF2                            --------->ALFIN1------>ZmHOX2a(2)             --------->AtMYB61         --------->HSFB2a(2)            <-----------RAV1(1) ------TOE2(3) ------>MYB46(1)         <---------HSFB2a(2)         <---------AtMYB61<---------ARR14(3) ------TOE1(3) -------->P  <---------DAG2   <-------TEIL    --------->REM1(2)   ---------->DOF2   aggtttcaaacaaaaccaactctctctcactttctctgtttctaggtgcaacttattgtctatgtagagatggtgttggagagaaagatcttcaaacatc  1064500                                                                    --------->MYB46(3)                                                                   ------>MYB46(1)                                                                   ------>MYB83                  ----                                                                 ------->GAMYB                   <---            --------->ALFIN1                                     <---------MYB59                <----           ------->MYC2                                          --------->AtMYB61              <----           <-------MYC3                                         --------->MYB46(3)              -----           <-------MYC2                                        -------->P                      <-----           ------->MYC3                              <---------ANAC58                     <---------WOX13(1)         ------->TEIL                         ---------->DOF2 --------->WOX13(1)        --------->ATHB12      <---------YAB1                    --------->YAB1------>ZmHOX2a(1)                <---------YAB1  <---------GLK1(2)                 ------>ZmHOX2a(1)<---------ANAC58               --------->ICU4   gatagattatgcatgtggagttttaaaagattgtaatcctattcatgagaaaggtccttgttatcaaccaaacaccatcaagagtcattgtgattgggcg  1064600                                <---------HSFB2a(2)                                --------->HSFB2a(2)                               <---------LBD16                          <---------CCA1(2)                        <---------WRKY38(1)                       <<<<<<<<<<WRKY43                                  --------->ARR14(3)                     ----------->GT1                                     --------->ARR14(2)                     <------MYB46(1)                                     <---------ARR11(3)      <---------ICU4 <------MYB83                                        --------->ARR11(3)    --------->ANAC55(2)<<<<<<<<<<WRKY38              --------->ARR14(2)  <-----------ARR10    <---------ANAC55(2)<<<<<<<<<<WRKY26              <---------ARR14(2)  --------->GLK1(2)        ---   <---------ICU4   --------->MYB59                 <------ZmHOX2a(1)    <---------ARR14(3)      <--- ----->At5g28300  --------->ARR14(1)              <---------TOE1(2)------>MYB83                  ---- ----GAMYB        --------->CCA1(2)              <---------LBD16   ------>MYB46(1)               ---- -----MYB46(3)   --------->ARR11(3)     --------->At5g28300       --------->ANAC46              <---- -----DEAR3(2)   --------->ARR11(1)    ----------->GT1            --------->ANAC58  --------->ANAC58 ------>GT1      --------->ARR14(2)  <---------At4g35610          --------->ANAC58  ----------->GT1 ----DEAR3(1)    <---------ARR14(2)  --------->At4g35610         --------->MYB46(3) --------->ANAC58   gttaatacttatttccaaagatttggtcaaatctctggaagctgtaatttctcaggaactgctactaccagccaaaatcttccttcaagtaaaaaccaaa  1064700  Previous    Next  AGI:  At2g03505.1    Description:  glycosyl hydrolase family protein 17. similar to beta-1,3-glucanase-related [Arabidopsis thaliana] (TAIR:AT1G13830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73948.1); contains InterPro domain X8 (InterPro:IPR012946) Range:  from: 1064233    to: 1065369    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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