Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                            <-------TEIL                                                          ---                   --------->ARR14(2)                                                             <--                   <---------ARR14(2)                                                             <--                  <---------GLK1(1)                                                             -----           <---------ARR14(2)                                                                 -------           --------->ARR14(2)--------->TOE2(3)                                             --------->MYB52(1)      --------->ZAT14  <---------ALFIN1  <-----------GT1      ------>ZmHOX2a(1)         --------->ANAC46   ataacaacttcactatctgcaaatcccacatccataaacatttttacacatactgacactgttcctaaaacacactaatctcaagaacccaaacaacgca  1037200     <---------AtMYB61 <---------ANAC58 <---------ANAC58 <---------ANAC46 -------TEIL                                                                    --------->YAB1 ------>ARR14(2)                                                           --------->At4g35610 -------ARR14(2)                                                           <---------At4g35610 -------GLK1(2)                            <----------DOF2              <---------ZAT14 ------>ARR10                          <---------TOE2(3)             <---------At5g28300          <-- >GAMYB      ---------->DOF2           <---------TOE1(3)            <-----------GT1    ---------->DOF2   gattcgtgtggttttcaaagcgagactcaaaaacttcccttaaggctttctcatcagttaaacaacctatttactgcagctatagtaatcaaagaggtta  1037300                                                                       ----------->RAV1(1)                                                                      ----------->HVH21                                   ---------->DOF2                   --------->At4g35610        <---------GLK1(2)    ---------->DOF2                      --------->At4g35610   ------->GAMYB         <---------WOX13(1)                       <---------ZAT2<------ZmHOX2a(1)  --------->MYB46(3)   --------->ATHB12   --------->MYB46(3)      <---------At4g35610 -------MYB59         <---------YAB1   <----------ID1      <------NtERF2<-----------------------TaNAC69(2)   tctaaccacagattagttcttaatatgattgaaaagagaaaggaacaaacttgagaatggccgaaggaagcagcgacatggaggagagagcgaccatctt  1037400                                                                            --------------------->WRI1                                                                            <----------DOF2                                                                       --------->At4g35610                                      <---------ICU4                   <---------At4g35610         --                                   <---------At4g35610             --------->ARR14(2)              <-                        --------->At4g35610                      <---------ALFIN1 --------->MYB46(3)                        <---------At4g35610               ------->TEIL --------->LBD16      <--------   cgtttctgaaattgagagatttagagagctgttcttcagataatgacatgaacaacgatgaatctccccattccgctgctttgaacaactcttcgtctct  1037500                                                                                       --------->ZAT18                                                                                       <---------ZAT18                                                                                       <---------ZAT14                                                                                       --------->ZAT14                                         --------->HSFC1(2)                           ----------->GT1               <---------MYB46(3)        <---------HSFC1(2)                          <---------------AtSPL8            --------->ARR14(2)        ---------->DOF2                             ---------->DOF2  --    <----------DOF2             <---------WOX13(1)                            --------->LBD16    <--- ------->At4g35610            --------->ATHB12          ---------->DOF2   <---------ARR14(2)    <---- --------At4g35610           <---------YAB1       <<<<<<<<<TBF1           --------->GLK1(2)     ----- -CCA1(2)<----------DOF2     --------->ICU4    <<<<<<<<<TBF1              --------->ARR14(2)---------   catctgctttgctgtatcggttgcaatttccatgattgatcaaagcttcttcttcttccaaagttcgaattcagaaaatccagagaaagtgtacaaaaga  1037600                             *TSS                                                                   -                             ------------>CBF         ---------->DOF2                               - -------->DOF2           --------->AHL20(2)     --------->At4g35610                    <---------ARR14(2) ---ZmHOX2a(2)       <---------YAB1        --------->YAB1   <---------AHL20(2)         <---------GLK1(2) -----ARR11(3)      --------->AHL20(2)  --------------->AGL15            --------->ANAC58      <----- ---->ARR11(3)      <---------AHL20(2)  <---------------AGL15            --------->ANAC58      <----- ->DOF2            --------->AHL20(2)   ------>ZmHOX2a(1)   --------->AHL20(2)         --------->ARR14(2)   tcaaagacaagagaccctaaattaaaattaaaacaatttctcctaaaataagcagaaaaagattaatttcccaacaagaaaacaaaatggattcgcatat  1037700                                               <-----------GT1                                          <------MYB46(1)                                          <------MYB83                                          ----------->GT1                                         <---------AtMYB61                                        <---------MYB55(1)                                       <---------MYB52(1)                                 <---------ANAC58  <---------ARR14(2)                                 <---------ANAC58  --------->ARR14(2) -------->PCF5       ------------>CBF<---------ANAC58 -------->PCF2      <-----------GT1  <---------ANAC46 ----ARR14(2)       --------->ANAC46 <---------ANAC58    <----------DOF2 -------CBF    <----------DOF2 <------ZmHOX2a(1)<<<<<<<<<GATA-1   tgggcccgtttatgggccttttacacaatctcaggacttgcgtttggtttatctatccgctttcagttcgtattcattcggttttcagtttatttttcta  1037800                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                            <--------                                                                                   <---------MYB52(1)                                                                                  <-------GAMYB    <-                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                               <---------------AGL15       <---------ANAC58                                                     <----------DOF2             ----------->GT1   --                                       --------->MYB52(1)      --------------->AGL15       <---------ANAC58   aaatttagtattcattcgcttattttgaaattttgtttcgctatcggttttggttcttttggtttcaaaatttagtattcattcggttattttgctttga  1037900               <---------MYB52(1)              <-------GAMYB             ----------->GT1         --------->KAN4(2)         <---------ARR14(2)         --------->ARR14(2)        <---------HSFB2a(1)        --------->KAN4(1)        --------->HSFB2a(1)        <----------TaMYB80        <---------KAN4(1)                                                                         ---        <---------GLK1(1)                                                                         <--        --------->GLK1(1)                                                                      ------       <---------ARR14(2)                                                                     -------       ---------->TaMYB80                                                                     <------   <---------LBD16                                                                            <------ --------AHL20(2)                                                                             ------- --------ARR11(3)                                                                            -------- ------->AHL20(1)                                                                         --------->AHL20(2) ------->AHL20(2)              <---------LBD16                          <<<<<<<<<GATA-1   <---------AHL20(2) --DOF2--------->ARR14(2) <---------CCA1(1)     <---------YAB1      <----------DOF2 <---------RVE1(1) --------AHL20(1)         <---------RVE1(1)  <---------MYB52(1)     <---------DAG2 <---------MYB52(1) ------->ARR11(3) <---------YAB1            <-------GAMYB     <-----------GT1    <---------TOE1(3)<--   atatattcggatattcggttatttttggatattttcggacattttcggttatttttgagtatttttactactttatctattttcaggtatttttaattat  1038000                                                                     --------->LBD16                                                              <---------ZAT14                                                              --------->ZAT14                                                 <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------AHL20(2)                                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxx>smallRNA(s) --------->AHL20(1)                                                 xxxxxxxxxxxxxxxx>smallRNA(i) --------->AHL20(2)                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                               <---------GLK1(2)     xxxxxxxxxxxxxxxx>smallRNA(i)                      <---------AHL20(1)       <---------ARR11(3)  <---------LBD16                      --------->AHL20(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      --------->AHL20(2)      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      <---------AHL20(2)      <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->AHL20(2)                    <---------TOE2(3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  --------->AHL20(2)     <---------YAB1       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               <---------ICU4            <-----------GT1 --------->LBD16      <---------AHL20(1) ------>AHL20(2)  <---------AHL20(2)   --------->YAB1    <---------LBD16      <---------AHL20(2) -------AHL20(1) <---------YAB1       <---------YAB1    xxxxxxxxxxxxxxxx>smallRNA(s) --->AHL20(1) --------->AHL20(2)    --------->YAB1 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -->AHL20(2)  <---------AHL20(2)   --------->AHL20(2)   xxxxxxxxxxxxxxxx>smallRNA(i) ---ICU4      --------->ICU4       <---------YAB1xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---AHL20(2)  <---------ATHB51     <---------AHL20(2)   --------->ANAC46------>NtERF2        -------- -->ATHB51  --------->YAB1        <---------AHL20(1)   ------->GAMYB<---------ANAC46    <---------TOE1(3) ->ICU4------>ZmHOX2a(2)          --------->AHL20(1)   <---------LBD16<------NtERF2     <---------TOE2(3) -------AHL20(2) --------->ICU4   --------->AHL20(2)<-----------GT1--------->LBD16     ---------->DOF2   tttatttgatccaaaaataattaatattttagaaaatataattatactagattttaacccgcggtataccgcggggacaatttattttttaaagttagta  1038100  Previous    Next  AGI:  At2g03430.1    Description:  ankyrin repeat family protein. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G19150.1); similar to putative ankyrin [Oryza sativa (japonica cultivar-group)] (GB:AAK16185.2); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 1036005    to: 1037629    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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