Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                =====                                                                                             <-------                                                                                             <-------                                                                                             ------>NtERF2                                                                                             --------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                           <------NtERF2                                                                                           --------->At4g35610                                                                                           --------->RAP2.3(1)                                                                                           --------->ATERF1(1)                                                                                          <---------ATERF1(1)                                                                                          <---------RAP2.3(1)                                                                                          <---------DEAR4(2)                                          <-----------HVH21                              <---------DEAR3(1)                                          ----------->RAV1(1)                           --------->At4g35610                                          =======================RAV                    <---------At4g35610                                 ------>NtERF2                                       <---------ZAT14                                --------->DREB2C(2)                                  <---------ZAT2                                --------->ANAC46--------->ZAT2                       <---------At4g35610                                --------->RAP2.6(2)                                  --------->At4g35610                       <---------ALFIN1  --------->At1g77200                         --------->ZAT14                       --------->DEAR3(1)--------->DEAR4(1)                          --------->ZAT2                    <---------ALFIN1<-----------HVH21<-----------RAV1(2)           --------->ANAC46 <                    --------->AtMYB61    --------->DREB2C(2)    <---------YAB1   ------->GAMYB<------NtERF2              <---------ICU4    ------->GAMYB   --------->At4g35610              --------->AtMYB61 --           <---------WRKY12     --------->DEAR3(1)----------->HVH21              <---------ALFIN1----           <---------WRKY38(1) --------->MYB46(3) --------->ZAT18               --------->MYB46(3)---          --------->WRKY18(1)<---------ALFIN1   <---------At4g35610   --------->At4g35610--------->DEAR3(1)     <---------LBD16--------->DEAR3(1)   ----------->HVH21      --------->ICU4 -------->P<---------RAP2.3(2) ---->At4g35610    --------->MYB46(3)    --------->DEAR3(1)   <---------At4g35610----------->RAV1(1)-   cttaaacctcgggtcaacatcaccaccgcttccaccgccatcaccgacagagctcacaggtgtctgatgatgagcagtagcaaccacagcagcggcggca  1016700          --------->ATERF1(1)          <------NtERF2          <---------LBD16         <---------ATERF1(1)         ------>NtERF2        --------->ATERF1(2)        <---------ATERF1(2)       --------->ERF1       --------->ATERF1(1)       --------->RAP2.3(1)      ------>NtERF2      <---------ATERF1(1)      --------->At4g35610    --------->ATERF1(1)   <---------At4g35610   --------->At4g35610   --------->ZAT2   ----------->RAV1(2)   <---------ZAT2 ------>RAV1(1) ==============RAV --ATERF1(1) --RAP2.3(1) ->RAP2.6(2)   ---------->DOF2 >ATERF1(2)  <------NtERF2                                                           <---------TGA1a -ANAC46--------->DEAR3(1)                                                 <---------AHL20(1) -ATERF1(2)--------->DEAR3(1)                                              --------->AHL20(1) -DEAR3(1)--------->RAP2.3(1)                ==================================================bZIP_DOF ---------At4g35610                          ---------->DOF2               --------->AHL20(2) ----->GAMYB--------->LBD16   <---------At4g35610                          <---------AHL20(2)       < ----->At4g35610 --------->ANAC58    --------->At4g35610                  --------->AHL20(2)--------- ------>MYB46(3) --------->ANAC58 ---------->DOF2                 <------ZmHOX2a(2)  <---------O2   - -------->At4g35610           --------->At4g35610               <------ZmHOX2a(1)    ================   acagcagctgccgccggagaagccatagctccagctaaaagctgagagaaagacttgaactcatcaggatcagagaataaatttgagacgagagtcattg  1016800                                                <---------HSFB2a(2)                                              <XXXXXXXXXXXXXXXXXXXXMIR858                                             <-----------HVH21                  --------->DEAR3(1)     ------>MYB83                  <---------ALFIN1       ------>MYB46(1)                ------->GAMYB            --------->MYB52(1)                          <---------MYB46(3)               --------->ANAC58         --------->MYB55(1)         --------->WRKY38(1)               --------->ANAC46        <---------MYB55(2)          --------->WRKY12<---------MYB52(1)   <------ZmHOX2a(1)--------->MYB46(3) --------->MYB46(3)         <---------MYB52(1)--------->ALFIN1 ---------HSFB2a(2) <------NtERF2      <---------MYB46(2)       --------->ATHB12  --------->LBD16 >ATHB12       --------->ANAC58        --------->AtMYB61  <---------ZAT6        <---------LBD16 -------->HSFB2a(2)------>NtERF2      --------->ANAC46  ----------->GT1 --------->At5g28300 =======================MYC_MYB     <-----------GT1<------ZmHOX2a(1)   <---------ANAC46        <-----   gtccaggactaaatccaacgccaccgctaaaaaacatttcaccaaacggtcgaggaggtagtgaaatcgttggccgtgaaactccggtggatgattttaa  1016900                                                                            ------>MYB83                                                                            ------>MYB46(1)                                                                --------->TOE1(3)                                                                --------->TOE2(3)    ----------->GT1         <----------DOF2                                        <----------DOF2------->GAMYB    <---------HSFC1(2)          <---------GLK1(2)       <------ZmHOX2a(1) <---------MYB59    --------->HSFB2a(1)    --------->DEAR3(1)           ----------->GT1  --------->ANAC58    --------->HSFC1(2)   ------>NtERF2                 ----------->GT1   --------->ANAC58           <    <---------MYB46(3)   --------->LBD16               <----------ID1    --------->ANAC46           -   <---------TOE1(2)    --------->ANAC46             --------->DAG2  <---------MYB52(2)             < ------GT1             <---------LBD16              ---------->DOF2  --------->MYB46(3)   ---------->DOF2   cttcgatggttctttttcttccttctccgccatcgattcttgattttgagaacaaaaaggataaaactttaacaaacccaactcacacagaaaaaagaag  1017000                                                                                                <----                --------->ZAT6                          <---------ANAC46                        -----         <----------DOF2                                <---------bZIP60(2)                     <----    <-----------GT1                     --------->AHL20(2)                                      ----- <---------RVE1(1)                      --------->YAB1  <---------ANAC58            --------->AHL20(1) <---------CCA1(1)                --------->TOE2(3)     <---------ANAC58            <---------AHL20(1) ---------ARR14(2)        <---------ANAC46         <---------ANAC58              --------->AHL20(2) -------->ARR11(3) <---------DAG2 --------->YAB1  <-------TEIL              ----------->GT1<--------- ---------ARR11(3) <----------DOF2--------->TOE1(3)<---------ANAC58 <----------DOF2 <---------AHL20(2)   aagatatttctctttctaacacttttttttgtgtaatcttaattatacaaaattcgtgtcgtgtttctctctttcattttgtataaaatatttctttgtg  1017100                                                            ----------->GT1                                                           --------->HSFB2a(2)                                                           <---------HSFB2a(2)                                                          ------>ZmHOX2a(2)                                                         --------->GLK1(1)                                                        <---------AGP1                                                        <---------ARR11(3)                   <---------AHL20(2)                   --------->ARR14(2)  <----------DOF2<---------RVE1(1)                      --------->ARR11(3)  --------------->AGL15                                 <---------ARR14(2)                          < -----ZAT18      <---------CCA1(1)                      <---------ARR14(3)             --------->ZAT6 ---->ZAT14     <---------ARR11(3)           *TSS       --------->ARR14(3) <---------AHL20(2)       - -----ZAT14     --------->ARR11(3)         ---------->ID1<------ZmHOX2a(2)--------->AHL20(2)        < ---->ZAT18     <---------GLK1(2)<---------ANAC58      <---------CCA1(2)  <---------AHL20(2) -------- -DOF2         <---------RVE1(1) <---------ANAC58---------->DOF2     <---------YAB1  <-----------GT1<   cagtcttttaatgggagagattttttttgtgattttcttgtgtttgtctcttcaagcagatctcgaaaaatatgaataaaattttgtttacagtataaag  1017200            <---------YAB1          --------->CCA1(2)         <---------ARR14(2)       ----------->ARR10     <---------ZAT14     --------->ZAT14    --------->ALFIN1                                               <---------AHL20(2)  <---------ANAC46                                        <<<<<<<<<<GT-3b <---------DEAR3(1)                                  <---------AHL20(2) ---------LBD16   <---------ZAT6                     <---------AHL20(1) -------->At4g35610                           <-----------GT1     --------->AHL20(2) ---------ZAT14   ----------->GT1           <---------AHL20(2)<---------YAB1 -->DOF2 --------->ARR14(2)        <----------DOF2   --------->AHL20(2) ---------At4g35610               <------------------------ANAC81 <---------AHL20(2) --------->AHL20(2)   tctgcggtgcagatatgatagagtaaaaactctctgtctttttcattttatccattttatttttcttattaatttttgattttcaaaaaaaatgacacat  1017300                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC46                                                     <--------P                                                    <---------ANAC58             ---------->DOF2                        <---------ANAC58        <----------ID1                             <---------MYB46(3)                 --------->YAB1     ------->TEIL     ---------->DOF2  <---------AHL20(2)                        --------->AHL20(2)  <---------YAB1   ----------->GT1     --------->AHL20(2)             --------->AHL20(2)  --------->ICU4 ---------->DOF2    ------->TEIL  <---------AtMYB61   <---------AHL20(2)           <-   cgtaatgaatgctacaaaagaaagtaaagtatttcatgaatttaaatttgcattggttgcttacataagaaattaaacaaaaaaaaaatcataaaacatt  1017400                   <---------AHL20(2)                   --------->AHL20(2)                  <---------AHL20(2)                   --------->AHL20(1)                  --------->YAB1                       <---------AHL20(1)           ----------->GT1              <---------YAB1                           --------->AHL20(2)      <---------AHL20(2)             --------->ARR11(3)    <----------DOF2     <---------AHL20(2)  --------->YAB1             <---------ARR11(3)<---------GLK1(1) --------->ANAC55(2)    <---------bZIP60(1)  <---------AHL20(2)           --------->GLK1(1) ----------->GT1        --------->bZIP60(1) --------TOE2(3)  --------->AHL20(2)             <---------ANAC55(2)   <---------ARR11(3)   taagttaatttggaagataattaaaatatagagatttctttgcaaaataacatgtaataaaatacaataacatgatatcatattatttgtaaaatatgca  1017500                                         --------->AHL20(2)                                         <       --------->AHL20(2)          <---------ARR14(1)                                             xxx       --------->ATHB51        <---------At5g28300                                               <---       -------->ATHB1         <-----------GT1                                              <xxxxxxxxx      <---------ATHB12    --------->AHL20(2)          --------->TOE2(3)                    --------->ANAC58      <---------ATHB51    <---------AHL20(2)   --------->ANAC46                            --------->ANAC58      --------->ICU4--------->YAB1 <---------CCA1(2)  <----------DOF2                     xxxxxxxxxxx    --------->WOX13(1)<---------YAB1<---------ARR11(1)--------->TOE1(3)               <----------ID1<   caaaatcaattattcattttagttataattttttaccgtatcattttatacacaaactttaaaatttcaaaacttcgatagattaatagagacaagtatg  1017600  Previous    Next  AGI:  At2g03340.1    Description:  WRKY3 (WRKY DNA-binding protein 3); transcription factor. Identical to Probable WRKY transcription factor 3 (WRKY3) [Arabidopsis Thaliana] (GB:Q9ZQ70); similar to WRKY4 (WRKY DNA-binding protein 4), transcription factor [Arabidopsis thaliana] (TAIR:AT1G13960.1); similar to DNA binding protein WRKY2 [Vitis vinifera] (GB:AAT46067.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 1014347    to: 1017145    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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