Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ANAC46                                 --------->ANAC58                                 --------->ANAC58                               <---------ALFIN1                              --------->ZAT14                <---------ZAT18                           --------->At4g35610              <------ZmHOX2a(1)                         --------->MYB46(3)                --------->ANAC46                    ------                        ------->TEIL               ----------------->AGL1                    <-------                       --------->ARR14(2)        --------->RAP2.6(2)                         <-------                       <---------ARR14(2)        ------->GAMYB                   <---------ANAC55(1)                     --------->ANAC58            --------->DEAR3(1)              <---------ANAC58                     --------->ANAC46            --------->ANAC46                <---------ANAC46              ----------->GT1 <---------ZAT14   --------->MYB46(3)            <---------MYB52(1) <---------At4g35610 --------->ANAC58           --------->DEAR3(2)----------->GT1<---------ANAC58   ttcagcaaatgagagagagttacacgaaccgctgcacgcatttgattcaaaccgccattacaggacactagtaaaattccattacttgtgtaattccctg  997900                                                                       ----------->RAV1(1)     --------->AHL20(2)                                               <----------ID1              <-- --->AtLEC2                                                  <---------ATHB12                  <----- --ANAC58                                                --------------->AGL15           <------ZmHOX2a(1) --ANAC58       <----------DOF2   <---------GLK1(2)      <---------------AGL15<---------MYB52(2)-----   caaaaaaaaaaattcaaactttccttcaatctctcaaattctcaataaccaaaacaaaacccaatgaagaaaacaacaaaactaacttggaggaagagga  998000                                               <---------MYB46(3)                                               <------MYB46(1)                                               <------MYB83                                             <---------WOX13(1)                    <---------LBD16        --------->ATHB12                   <---------LBD16        <---------YAB1        --------->CCA1(2)           ----------->HVH21      --------->HSFB2a(2)          --------->ARR14(2)         <---------At4g35610      <---------HSFB2a(2)          <---------ARR11(3)         --------->At4g35610   --------->ARR14(2)              --------->ARR11(1)   --------->MYB52(1)--------->LBD16   <-----------------------TaNAC69(2)    ---------->DOF2 ----ZmHOX2a(1)   ------->TEIL <---------ARR14(2)              --------->ARR11(3) -ZmHOX2a(1)    <---------ZAT14--------->GLK1(2)             ----------->ARR10    --------->At4g35610 ---->ALFIN1--------->MYB52(1)<---------GLK1(2)----------->GT1 <---------ARR14(2) <---------At4g35610   ggaggtaatggaactgactgaaccgggagagagaatctagaaatgtgattggttaaaccagtgaagatttgggaatgccaaaagagctgaatcaaacaag  998100                                                                                                    <                                                                                                    -                                                                        <------ZmHOX2a(1)         <--                                  ------>MYB83                 <---------WRKY18(1)                <--                                  ------>MYB46(1)           <---------ANAC58              --------->LBD16                                <---------MYB59             <---------ANAC58<----------DOF2       ---       ---------->DOF2   ---------->DOF2         <----------DOF2  <---------LBD16       <---------LBD16   tccaaaccaaaatgcaagaacaaactctaaagaaccaaacttgtaatcgagctttgggaatagcttgactcggaggagctttatagtcactccgcatcag  998200                                                                     >>>>>>>>>MYB98                              ---------->CDC5                       ------>MYB83                            --------->ANAC58    ----------->GT1     --------->MYB52(1)                        ------>NtERF2         --------->At4g35610 <---------MYB59                       --------->ANAC46  --------->REM1(1)  --------->YAB1                       --------->bZIP60(1)  --------->ATHB12<---------AHL20(2)                       <---------bZIP60(1) <---------YAB1<---------ICU4         <------ZmHOX2a(2)  --------->ANAC58<---------ICU4  --------->AHL20(2) ---------ZAT14      ------>NtERF2   ------>NtERF2      <---------ATHB51 -------->ZAT14     --------->DEAR3(1) <----------DOF2  --------->ICU4   ---------->DOF2   ---------- -------ZAT14     ------>NtERF2  --------->DEAR3(1)     <---------AHL20(2)      <----------DOF2 -------ZAT18    --------->DEAR3(1)  --------->At4g35610--------->AHL20(2)--------->ARR14(2) ------>ZAT14    ----------->HVH21  --------->DEAR3(1)--------->YAB1------>MYB46(1)     *TSS   agtactctccgatctatctccgacgacgacactcatcgccgcttcatcatcggaaaaaataattaaaacctaacaaaaaccgcttaatttgccaaaagtt  998300                                                                                 <---------TOE1(1)                                                                                --------->SPL7                                                                               --------->SPL1(1)                                                                              --------->TOE1(2)                                                                              <---------SPL7                                                                              <---------SPL1(2)                                                                            --------------->AtSPL3                                                       --------->ZAT18  <-------TEIL                              <---------YAB1         <---------LBD16   --------->ARR14(1)                           --------->ICU4            --------->ZAT18   --------->CCA1(2)                           <---------ATHB51          <---------ZAT18  <---------ARR14(2)   <----------DOF2     --------->LBD16              --------->ALFIN1  --------->ARR14(2)         <--- >DOF2<---------ANAC46--------->ANAC46 ----------->HVH21------>NtERF2 --------->ARR11(1)   ----------   tgaaacttttgtggatttttttctccgaaattatgaaattagtgaccgaaacaagtgcggacaaaaaatacagatacgaccgtacgaagttttgtttttt  998400                                                                          --------->KAN4(2)                                                                         <---------KAN4(1)                                                                     <---------TOE2(3)                                                               --------->AHL20(2)                                                            <----------DOF2                       --------->LBD16                    ------>MYB83  <---------YAB1                     <---------LBD16                      ------>MYB46(1)--------->KAN4(1) --------GT1    <----------DOF2                         <---------MYB111(2)                        -- >ID1     <---------YAB1                                <---------MYB111(1)            --------->YAB1   ttctatatgtttatgtttcttttcccgtgagaaaattgaatttttcttaagaaatacacctacttttatataagattattcgaaaacaatcgaaattttt  998500                                                                                       <---------ICU4                                                                                    <---------ICU4                                                                                    --------->YAB1                                                                                 <---------ICU4                                                                                 --------->YAB1                                                         <----------DOF2        <---------YAB1                                                        <---------ICU4        --------->YAB1                                                 <---------ARR11(3)           <---------ICU4                                              <---------WOX13(1)             <---------YAB1       <--     ----------->GT1                    --------->MYB52(1)                 --------->YAB1         <-- --------->ICU4                         ----------->RAV1(1)        <----------DOF2 <---------YAB1 <-- -------->DOF2                    <---------GLK1(1)------>ZmHOX2a(2)      <------ZmHOX2a(2)      <---   gcaaagatggtatttttcaaaattagaaaaacttgaaaatcccaacagattgatctcatctttatctctcttttggatcatcatcatcatcatctctgta  998600                                                                           <---------MYB59                                                                        <---------ARR14(2)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             --------->ARR14(2)            --------->AHL20(2)                                    --------->ARR14(2)           <---------AHL20(1)                                     <---------ARR14(2)           --------->AHL20(1)       --------->LBD16             --------->LBD16          --------->AHL20(2)    --------->ARR14(2)            <---------LBD16------>MYB83        --------->AHL20(2)    <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------ARR14(2)      <---------AHL20(2)      <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->ARR14(2)     --------->ARR14(2)      --------->AHL20(2)     --------->AHL20(2)             --------->GLK1(2)------>MYB46(1) -------ANAC46       <---------ANAC58               <------ZmHOX2a(2) --------->LBD16 -------ANAC58       <---------ANAC58 --------->GLK1(1)    --------->RVE1(1) --------->MYB52(1) -------ANAC58<---------AHL20(2)<---------ARR14(2) <---------ARR14(2)--------->HSFB2a(2) ------At4g35610    xxxxxxxxxxxxxxxx>smallRNA(i)   --------->ARR14(2)<---------HSFB2a(2)           --   gcttataaaaaaatatatatatggctgggcataaaatccgaaatctaaaaaccgatccaaaaaatccggttccgaaaccgaaccgaatagtcacaaaacc  998700                                                                                                   --                                                                                                -----                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                    --------->AHL20(2)                                                                                    --------->AHL20(1)                               --------->LBD16                      <---------ARR14(2)        <------                              <---------HSFB2a(2)                   --------->ARR14(2)       <-------                              --------->LBD16                       <---------ARR11(3)   <---------AHL20(2)                              --------->HSFB2a(2)                   --------->ARR11(3)   --------->AHL20(2)                             <---------LBD16                       --------->GLK1(1)<---------AHL20(1)        <---------YAB1   --------->ARR14(2)                        <---------GLK1(1)<---------AHL20(2) ------->MYB52(1)   --------->ANAC46                   ---------->DOF2         --------->LBD16-------   caaacagatgatgaattcttctacccaaattccccgaactgaattcaatccgaaccgaaaaccgaatggatatctgtaatccgaaataaaattatatatc  998800  Previous    Next  AGI:  At2g03280.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G14020.1); similar to hypothetical protein OsJ_000519 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10694.1); similar to hypothetical protein OsI_000541 [Oryza sativa (indica cultivar-group)] (GB:EAY72694.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 996085    to: 998288    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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