Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         <---------LBD16                                 <---------GLK1(2)                        xxxxxxxxxxxxxxxx>smallRNA(i)            xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    --------->ARR14(2)                       xxxxxxxxxxxxxxxx>smallRNA(i)                    <---------GLK1(2)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    <---------ARR14(2)                     <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)               --------->ANAC46                           xxxxxxxxxxxxxxxx>smallRNA(i)               --------->ANAC58                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <---               --------->ANAC58                       <---------ANAC58   --------->ARR14(2)      ----               --------->AtLEC2                    xxxxxxxxxxxxxxxx>smallRNA(i)                  ----            --------->MYB46(3)<----------DOF2xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                ------            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <-----      <---------TOE2(3) <---------LBD16<---------LBD16<---------ANAC58   <---------ARR14(2)    <-----   tcaatattgtggtaaccacgcaaattctcgggctttgtgatttcggaatcagtgtttcttatcgcaacttagccatattcgctcaaaattgattcaaaat  993400                                      <----------DOF2                                  --------->ZAT18                                  <---------ZAT18 ------AHL20(1)                  <---------ANAC46 ----->ARR11(3)                  <---------ANAC58  <---------HSFB2a(2)  --------->AHL20(2) ----->AHL20(1)                  <---------ANAC58  --------->HSFB2a(2)  <---------AHL20(2) --->AHL20(1)                   --------------->AtSPL8                 --------->AHL20(2)    <------- ----ARR11(3)                   --------------->AtSPL3          <<<<<<<<<WRKY18    <---------AHL20(2) ----AHL20(1)       <---------AHL20(2)--------->TOE2(3)       <-----------HVH21   --------->AHL20(2)   attttgagtagcaatgttgtttttatttttctgtagcgtactttaatcagtttctagtaatctctgtcaaaaattaaaatgatataaaattccaactttt  993500                  --------->AtLEC2                <---------ANAC46           <---------AHL20(2)                <---------ANAC58          --------->AHL20(2)      ---------->DOF2                     <---------AHL20(2)                                    ----- --------->MYB59<---------ANAC58  <---------At4g35610          ------>ZmHOX2a(2)  ----------->GT1---- ---DOF2      --------->ARR11(3)  --------->At4g35610--------->AtMYB61----------->HVH21         <----   attttggtaaaagaaatgtcttgcacaagtttattttgctgaaattaaatggacaccaaaactgatccaaaactgacatatatgaagaaaaaaaacattt  993600                                                                --------->AHL20(2)                                                           ------------>CBF<---------ARR11(3)                                                      ---------->DOF2      <-----------ARR10                                                      <---------DOF5.7(2)  --------->ARR11(3)                                                    --------->DOF5.7(2) --------->AHL20(2)     ------                                                   --------->TOE2(3) ----------->GT1        ---------                                             --------->ANAC46   <---------AHL20(2)          <--------    <----------ID1                           --------->ANAC58   --------->YAB1             <---------TOE2(3) ---->AHL20(2)                <---------AHL20(2)   --------->TOE1(3) --------->YAB1       <---------- ----->AHL20(2)               --------->AHL20(2)  ----------->GT1   <---------YAB1     --------->YAB1 -----AHL20(2)  ----------->GT1              --------->ANAC58  <---------ATHB12        <---------ICU4   aaaatagggacatatatgaagaaaaaaaacatttaaaatgggcctaaacgaaacgttaaagcccaattatatgataaaatctaagcccattataacgtaa  993700                         <---------ANAC46                         <---------ANAC58                         <---------ANAC55(1)           <<<<<<<<<TBF1 --->MYB52(1)            <---------ANAC55(2)         *TSS                  --------->MYB46(3) >ANAC55(2)              <---------ANAC58          <---------ARR11(3)    --------->ANAC46 -ANAC55(2)             <-----------------------TaNAC69(2)   <---------At4g35610 -GT1           <----------ID1      <-----------GT1--------->ARR11(3)    --------->HSFB2a(2)       --   cgcttgagaagagtttgagagacaaatgcgtgtgctcgttaccatcttcttgagttcttcttcatcttccaatttccacaaccatttctcacttcgtctt  993800                                                                                --------->YAB1                                                                                <--------HAHB4                                                                       --------->MYB111(1)                                                                      <--------P-------->ATHB1                                                                     <---------MYB52(1)                                                                   --------->HSFB2a(2)  --------->bZIP60(1)         --------->GLK1(1)                                   --------------->AGL15   --------->ANAC46    <---------DEAR3(2)                                       <---------------AGL15 <---------ICU4   <---------DEAR3(1)                                    <---------ARR14(2)     --------->ATHB12   <---------At1g77200                       ------->GAMYB   ------>ZmHOX2a(1)  <---------ICU4 <-----------HVH21                     --------->TOE2(3) --------->ARR14(2)    --------->ICU4   <---- ---->ZmHOX2a(1)                <----------DOF2    <----------ID1  <---------HSFB2a(2)  <---------bZIP60(1)   cctcgtcggtgatttctagggttttgttcttcatctttcaatctcaaccgagaagaacaaatccttcttctggtaagtagaatcattacgacatcattta  993900                                                                --------->TOE2(3)                                                              --------->GLK1(2)                                                             <---------GLK1(2)                               <---------At4g35610 <---------ANAC46                               ------>ZmHOX2a(1)   <---------ANAC58                           --------->GLK1(1)       ----------->GT1    ------>NtERF2          <---------GLK1(1)       <---------ANAC58    --------->LBD16       --------->ARR14(2)       --------->ANAC55(2)  <---------LBD16         <---------GLK1(2)        <---------ANAC55(2)           <---------ANAC46   < -------GT1               <---------ARR14(2)    <---------MYB52(1)       <---------MYB46(3)         -   tctctccggctagattaatatcaattcggattcctctgagtttcgcttcggtttcgtaatttagaatctcaatagttgttgttttgtatagtatcgctca  994000            <---------ICU4               <-----------HVH21       --------->ZAT14                  <----------DOF2  --------->ZAT14                    <-----------GT1                        --------->ARR11(3)  <---------ZAT18                  <-----------GT1                  <---------ANAC46  --------->ZAT18            --------->ANAC55(2)                    <---------ANAC58  <---------ZAT14<---------YAB1 ------->TEIL          <---------TOE2(3)     <---------ARR11(3) ---------------AtSPL8       <---------ANAC55(2)     <-----------GT1<---------ANAC58               << -------------->AtSPL8    <---------ATHB12           --------->MYB52(1) <------ZmHOX2a(1) <----------DOF2   aatgtgtactaaactcattacaattgaaatcatgtattttcactttcagagaaattaacgcttgcaaatggcgaggaagatgtctcttgaagcttttgtg  994100                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)            --------->ANAC46                                       <---------ARR11(3)            --------->ANAC58                                       --------->ARR11(3)      <---------MYB46(3)                                      --------->GLK1(1)      <---------MYB52(1)                                 --------->At4g35610        --------->LBD16                                 --------->ZAT2           <---------LBD16          <---------ALFIN1       <---------At4g35610   --------->MYB46(3)                    --------         ----------------->AGL3 --------->GLK1(2) <----------DOF2    --------->ANAC58    --------->At4g35610 <<<<<<<<<<<<<<<LFY        ---------->DOF2     <---------ARR11(3)<----------DOF2    --------->At4g35610   tcaacaatggctccacttatagacatggagaaagaagctgagatctcaatgtctttaacctccggtgcttcaaggaacattgaaactgctcagaagaaag  994200                                                                             ---------->DOF2     <---------GLK1(2)                                                      --------->MYB46(3) <----- --------->MYB52(1)                                                       ----------->RAV1(1)  ------ -->DOF2              --------->ALFIN1         ----------->GT1       --------->WOX13(1)       ------>ZmHOX2a(1)   gcacaacgattctcaatttgaaatgtgttgatgttcaaacaggtctaatgggtaaatctcttattgagtttcaatccaacaaaggagatgtgcttcctgc  994300  Previous    Next  AGI:  At2g03270.1    Description:  DNA-binding protein, putative. similar to DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT5G35970.1); similar to hypothetical protein OsI_012038 [Oryza sativa (indica cultivar-group)] (GB:EAY90805.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80641.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23550.1); contains InterPro domain DNA helicase, putative; (InterPro:IPR004483); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:IPR014001) Range:  from: 993753    to: 996125    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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