Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                    <                                                                                                  ---                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                        <----------DOF2                                                                            ------>NtERF2   <--------                                                                          <---------At4g35610 <------    ---------->DOF2          <---------AHL20(2)                           --------->At4g35610 ------- -->ZmHOX2a(2)               --------->AHL20(2)                     <---------AHL20(2)<-------------- --YAB1                   ------->TEIL                      <-----------HVH21      <----------DOF2---   ccacttaaaagtatagttgattttcatgtattttaatcaaatggaccaagaccagtggaaagagtcacatataatcggctcccttcttttctttccgttt  937000       --------->HSFB2a(2)       <---------HSFB2a(2)  ------->TEIL -------->ZAT14 ---------ZAT18 ---------ZAT14 ------------>AtSPL3                                     ----------->GT1 --->ZAT14                                             <---------ANAC58 --->WRKY12                              <---------AHL20(2) ----ZAT14                               --------->ARR11(3) -ANAC46                                 --------->AHL20(1) ---MYB52(1)                             <---------AHL20(1)                       --------->AHL20(2) -->DOF5.7(2)                         --------->YAB1   <---------ANAC58     ----------->GT1 ----------ANAC81                 --------->ZAT6       <---------ANAC46     <----------ID1 ------------>AtSPL8          <-----------HVH21---------->ID1           ---------->DOF2   actgtacttccataagtcaaattttgtttagatgtcacactaatattttgtttttttgtgtgtaaaaacttactaaaagagaaaaaaaatactaaaaact  937100                                 --------->ARR11(3)                                 <---------ARR11(3)                                <------MYB83                                <------MYB46(1)                               --------->MYB59                           <---------AHL20(2)           <----------DOF2 --------->ATHB12                          ----------------->AGL1         -      --------->YAB1      --------->AHL20(2)                       <-----------GT1                  -     <---------YAB1 --------->YAB1                          <---------AHL20(2)                      -    --------->AHL20(2)    <---------AHL20(2)                --------->AHL20(2)                 ------    --------->AHL20(1) --------->AHL20(2)                 <---------WOX13(1)               <------ZmHOX2a(1)    <---------AHL20(1)<---------YAB1<----------DOF2     --------->ATHB12              --------->WRKY12   atacaatataatacttttacattgattatttattaggtctttagcgaatttttgacattgatttatatgtttccagttttgttatccgttgaaggagaaa  937200                                                        --------->ALFIN1                                                      <---------ANAC46              <---------AHL20(2)                                                      <---------bZIP60(2)           --------->AHL20(2)                                                   ----------->HVH21               --------->AHL20(2)                                                <-------MYC2                       --------->YAB1                                         --------->GLK1(1)                        <---------ATHB12                                         --------->CCA1(2)                      --------->WOX13(1)                                        --------->ARR14(2)                    --------->MYB46(3)                                        --------->ARR11(1)                   -------->P        <---------YAB1       ---------->DOF2    ------->MYC2            <---------ICU4   <---------MYB46(3)    --------->TOE2(3)      <-------MYC3            --------->YAB1              < ----------->MYB.PH3(1)  --------->TOE1(3)      ------->MYC3           --------->ICU4         ------- ----------->AtMYB77     --------->YAB1 <---------ARR14(2)             <---------ATHB12      ------->TEIL -------->MYB52(1)      <-----------------AGL3------->TEIL       ------->TEIL======================== ---->DOF2             -------->P       --------->ARR11(3)    <---------YAB1--------->WOX13(1)-------   agtatcggttaccattgtattgactaaccataaaagaaaacagatatgcatgtgtgatgtggtgatgaatgcaataatcaaccaattaaaatgcgaacgt  937300                     <---------YAB1                     ------------>CBF                  --------->DOF5.7(2)           ------->MYC3           ------->MYC2                           <-----------HVH21           <-------MYC2                          <------MYB83           <-------MYC3                          <------MYB46(1)     <---------ANAC58          --------->bZIP60(2)                   --------->MYB59      <---------ANAC46          <---------TGA1a                --------->ANAC46            <---------ANAC58          --------->TGA1a                --------->ANAC55(1)      <----------DOF2              <-----          <---------O2                   <---------ANAC55(2)  <---------MYB52(1)            <--------          --------->O2   <---------ATHB12<---------bZIP60(1)  <---------CCA1(2)      --------->YAB1          --------->ANAC58               --------->ANAC55(2) --------->LBD16         --------->TOE2(3)          <---------ANAC55(2)            --------->O2       --------->ANAC55(2)    <---------ARR14(2)          --------->ANAC55(2)            --------->ANAC58   --------->ANAC46       <---------ARR11(3)          --------->ANAC46               --------->ANAC58   <---------ANAC55(2)    <-----------ARR10        <------------OsbHLH66            --------->bZIP60(1)--------->ANAC58       --------->ARR11(3) -----------HVH21<-------GAMYB           ----------->GT1    ----------->GT1        --------->GLK1(2)- -->ANAC58===============MYC_MYB        <-----------------------TaNAC69(2)         --------->ARR14(2) ===================MYC_MYB          <-----------HVH21     <---------LBD16        <---------CCA1(2)-- -->ANAC58--------->ANAC58--------->AHL20(2)  --------->ICU4--------->ANAC58   --------->HSFB2a(2) --   aatgtcatagacacgtgagcgttaccaatgaaataagtctgtcacgtaattaggtcacagtcccgtaactttcgtggtcttcgagtatcttaattttctt  937400                                                                                         ------>ZmHOX2a(2)                                                                                        <---------GLK1(1)                                                                                        --------->GLK1(1)                                                                                       <---------ARR14(2)                                                      ------>ZmHOX2a(2)                --------->ARR14(2)                                                     <------ZmHOX2a(2)                 <---------ARR11(3)                                                     --------->CCA1(2)           --------->AtMYB61                                                    --------->ARR14(2)           <---------ALFIN1                                                    <---------ARR14(2)          --------->MYB46(3)    --------->ZAT6                                  --------->ARR11(3)        --------->AtMYB61 -----DOF2  <----------DOF2                         <---------AGP1           --------->MYB46(3) ---GT1    <------------------------ANAC81          <---------ARR11(3)     <-----------GT1 ----->ZmHOX2a(1)           <<<<<<<<<TBF1      <-----------GT1     <-----------GT1     --------->ARR11(3) ------->TOE1(3)      <<<<<<<<<TBF1 <----------DOF2 --------->AGP1<---------AHL20(2)   <---------AGP1 ------->TOE2(3)   *TSS  <<<<<<<<<TBF1        <-----------GT1    --------->AHL20(2)   <---------CCA1(2)   tccttaactcttctctttctcttcttcttcttcttcatctttttttttttaacagatctggtggaaattttatcttttgaccaccactggatctctctat  937500                                                <---------YAB1                                              <---------ICU4                                              --------->YAB1                                           --------->WOX13(1)                    <---------ZAT6      --------->ANAC58                                          <--        --------->At4g35610 --------->ANAC46 <---------ATHB51                                <-------        ----------->RAV1(2) --------->ANAC58 <---------ATHB12    --------->CCA1(2)         <---------        <---------At4g35610 --------->ANAC58 --------->ICU4     <---------ARR14(2)   <---------TOE2(2)     <-------TEIL   ----------->GT1     --------->ANAC58        --------->ARR14(2)   <---------TOE1(2)   atacacattcatctgagtaatagagtaaaaacgaaacacaagaagcaattatgaagaattgtgagagatttgctaatctcgctctcgcaggtttttctct  937600                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                    <---------WOX13(1)                            ----------->GT1                      <---------YAB1                  <---------YAB1                               <---------ANAC55(2)                <-----------GT1                                --------->ANAC55(2) --------DOF2<---------ICU4 --------->O2                    <------ZmHOX2a(2)                     <-- ----GT1     ----------->GT1<---------ANAC46               --------->ARR11(3)<----------DOF2<-------- --GT1   <---------YAB1     <---------O2               <-----------GT1    <---------ANAC58<---------At4g35610   ctttcactcttacaattgttacaattcgtctcgtgaatttcaattttcgatcgatttttacgatcatgtgattgtttcgcgttatgggtttcttctgatt  937700                                                                       <---------AHL20(2)                                                                    <XXXXXXXXXXXXXXXXXXXXMIR837-3P                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                               --------->AHL20(2)                                                              --------->ARR11(3)                                   <---------TOE2(3)          <---------AHL20(1)               <-----                               <----------DOF2                <---------ARR11(3)               <-----    <---------TOE2(3)  <---------DAG2                   <---------HSFB2a(2)                   ------- -------YAB1           <----------DOF2  <---------MYB46(3)    --------->AHL20(1)            <-------- -YAB1              <-----------GT1<---------TOE1(3)    --------->HSFB2a(2)             <------ZmHOX2a(2)   gtgatttaggcttcgaatttgttaactttttcggttttaggtttgttcttagaatttgctggaaaatatttatttttttgttcgttttagatcagtttgg  937800                            <---------WOX13(1)                          --------->ATHB12                         <---------YAB1                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58                    <---------MYB46(3) -MYB46(1)       --------->ATHB12         <---------YAB1 <-------TEIL -MYB83         ----------->HVH21      <---------YAB1   --------->CCA1(2) -->MYB59     <---------ANAC58  <---------WOX13(1)   --------->ICU4                               --- -MYB52(1)    <---------ANAC58--------->ATHB12  <---------ANAC46     <---------MYB46(3)<---------MYB46(3)   tttctctagggtttaggcttgatgggtgtgattgattgtttttgattatggtgtaaagattcaaaactgagtggtttttgtttttgttttggttacaggt  937900  Previous    Next  AGI:  At2g03120.1    Description:  signal peptide peptidase family protein. similar to peptidase [Arabidopsis thaliana] (TAIR:AT1G01650.2); similar to peptidase [Arabidopsis thaliana] (TAIR:AT1G01650.1); similar to unknown [Populus trichocarpa] (GB:ABK95465.1); contains InterPro domain Peptidase A22, presenilin signal peptide; (InterPro:IPR006639); contains InterPro domain Peptidase A22B, signal peptide peptidase; (InterPro:IPR007369) Range:  from: 937419    to: 940336    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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