Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <-----------GT1                                                                             <---------GLK1(2)                                                                             --------->ARR14(2)                                                    --------->LBD16      --------->SPL7                                                    ------>NtERF2      ----------->HVH21      <------                                                   <---------LBD16     <---------SPL7        <-------                                         <---------MYB52(1)    --------->HSFC1(2)          <---------MYB46(3)                          --------->MYB52(1)      <---------LBD16    <---------LBD16  <------ZmHOX2a(2)                 ---------->DOF2        --------->At4g35610    <---------HSFC1(2)<---------At5g28300            ----------->RAV1(1)         <-------GAMYB          --------->HSFB2a(1)    <---------ATHB12        ---------->DOF2---------->DOF2 <---------MYB46(3)  ----------->HVH21 <---------ARR14(2)   tcaaattccaaaaaccacagaaagaaaaagacggagagaggccgttgcattttccggcgagacgacgcttcttcggacggattcaccgatcatcggttgt  934900                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC58                                                                                       <---------ANAC46                                                                                       <---------ANAC55(2)                                                                                   <-------GAMYB                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                  <------MYB46(1)                                                                                  <---------MYB46(3)                                                                                  --------->MYB55(2)                                                                                  --------->MYB52(2)                                                                                  <---------DEAR3(2)                                                                                  <------MYB83                                                                                 <---------AtMYB61                                                                                 <---------MYB46(3)                                                                                 --------->MYB55(2)                                                 --------->ICU4                 <--------P                                            --------->ANAC58                    <---------MYB52(1)                                            --------->ANAC58                    <---------MYB55(1)                 <-----------GT1            --------->ANAC46       <---------ARR11(3)  <---------ANAC55(1)                --------->ZAT14      <---------MYB52(1)            --------->ARR11(3)  <---------ANAC58 ---MYB46(3)    <---------ZAT14    <---------ANAC58            --------->YAB1 <---------MYB46(3) --MYB52(1) <------------MYB.PH3(1)<---------ANAC58   <---------------AtSPL8 ------>ZmHOX2a(2)   ttcattctctggtaacagtttactgttttcgagttttccgttttctaagcaatgttcaagtactatcaagatttatcgatcggttggttgcgtgagaatt  935000                        <------MYB46(1)                        <------MYB83                 <---------MYB52(1)            ------>ZmHOX2a(2)          <---------ARR11(3) <---------ANAC58                                             ------->TEIL          --------->ARR11(3) <---------ANAC58    --------->GLK1(2)                     <---------YAB1   <---------ANAC58    <---------TOE2(3)     --------->ANAC55(2)                  <---------ZAT6   <---------ANAC46    --------->MYB59   <----------DOF2                   --------->ARR11(3)   <---------ANAC58--------->ATHB12    --------->At4g35610                <------ZmHOX2a(1)    ------   gattttcgtattgatcttcgttgattaggtttcttgatgtgagctttacataatctatctatagagaaacgaagaaggattttggtgttatgaatgtttg  935100                                                                     <----------DOF2                    ------>MYB46(1)                      <---------At4g35610      <---------ANAC58       --------->TOE2(3) <---------TOE1(2)    <---------ANAC58      <---------ANAC46       --------->TOE1(3) <---------TOE2(2)    <---------ANAC58      <---------ANAC58--------->TOE2(3)     <---------ANAC58   <---------At4g35610   <---------MYB52(1)>>>>>>>>>MYB98         <---------ANAC58   ------>ZmHOX2a(1)  <-------GAMYB     --------->MYB52(1)      <---------ANAC46   --------->At4g35610         --------->ZAT6 <-----------RAV1(1)------>MYB83         <---------MYB52(1)<---------ZAT18                 <--------- --->MYB52(2)     <---------MYB59   <-----------GT1      --------->At4g35610      --------->ARR11(3)   tttctgttgcttatttgaaacctaacttaaaccctaattttctgtttcgtatgttcttcagcgtcctctggctttgtgatttcagaacttgtttcactaa  935200                                          <------ZmHOX2a(2)                                         --------->ARR11(3)                                         <---------ARR14(3)                                         --------->ARR14(2)                                         <---------ARR14(2)                                         --------->AGP1                                         --------->ARR14(3)                                <---------YAB1                                <---------TOE2(3)                              <---------ICU4                              --------->YAB1                             --------->ICU4------>ZmHOX2a(2)                             <---------ATHB51                         <-----------------AG          --------->MYB52(2)                         <-----------------AGL1      <---------MYB52(1)                     --------->ANAC46    <---------ARR11(3)                     --------->ANAC58   --------->GLK1(1)                                       <---- --GT1               --------->ANAC58   <---------GLK1(1)    --------->YAB1                   <------   atcgttgctaaaatggctcattcaaggaacaattatggtaagagatcttgttttagttagttttcatatttgataagaggtaagagagtttttttctgat  935300                                            <---------ANAC46                                            <---------ANAC58                                            <---------ANAC55(1)         -------->HAHB4                     <---------ANAC58                         <---------MYB46(3)         <---------ICU4                    --------->MYB52(2)                       <---------AtMYB61         --------->YAB1                  <---------MYB52(1)                         --------->ALFIN1        --------->ICU4              <---------CCA1(2)                               <---------DEAR3(1)        <---------YAB1       --------->ARR14(1)                                  <---------AtMYB61        <---------ATHB51    <---------ARR11(3)                                   --------->ALFIN1      --------->YAB1        --------->ARR11(3)     <---------ANAC58    --------->ARR11(3)  ----------->GT1           --------->ARR14(2)     <---------ANAC46    <---------ARR11(3) -----YAB1 <-----------RAV1(1)     *TSS----------->GT1                <---------GLK1(1) ---At4g35610               <---------ARR14(2)     <---------ANAC58   --------->GLK1(1)      --------   gatacagataataatggtgctggattagaagatactgtgtatcgttacttgtgtcttgtgagaagagcagggagttcttgggagaggtggtgagattgca  935400                                                                             <---------ARR11(3)                    --------->ANAC58                           <---------ANAC58       <------MYB46(1)                          <---------ANAC58             <---------AHL20(1)       <------MYB83 --------->ANAC58            <---------ANAC58    ----------->GT1          <------ZmHOX2a(1)      --------->MYB59     --------->YAB1        <---------ANAC46 --------->ALFIN1        <---------ANAC46 --->GT1          ---------->DOF2  <---------WRKY12            <---------ANAC58    <---------YAB1   aaatagattaggtctgagactaaagcaaacatgagggtaaacgaggcattgcctggttgtgatgagcgtgttgtgactatatattctaatagcgaggaga  935500                                                                         <---------MYB46(3)         <                                                                         --------->MYB55(2)         -                        --------->ARR14(2)                              <--------P                ---                        --------->ARR11(3)                           <---------YAB1              <---                        <---------ARR14(2)                      <---------YAB1                   ----                       <------ZmHOX2a(1)                     <-------TEIL--------->MYB111(2)   ------                     <---------TOE2(3)             <----------DOF2 --------->CCA1(2) --------->GLK1(2)                    --------->YAB1      <----------DOF2  <---------TOE2(3)  <---------MYB46(3)-------           <---------At4g35610       ------>ZmHOX2a(1)   <---------TOE1(3)<-------GAMYB   <---------TOE2(3)   gaaatcgtattgaagatgacaatgaggattttgtctgtcctgcttttgatgctcttttcaaggttcatgatatggttgttgttgaagaatttgacgatga  935600       --------->YAB1       <---------ICU4      <---------YAB1     <---------AHL20(2)    --------->YAB1   <---------YAB1 <---------ICU4        --------->ZAT14 ---------YAB1         <---------ZAT14                    <---------ANAC58 -------->ICU4    <---------YAB1                          <---------ANAC58 ------>YAB1    --------->YAB1                            <---------ANAC46 ------YAB1     <---------ICU4                  <---------ZAT6                                     -- ----->ICU4    --------->ICU4             <---------MYB46(3)                                    ----- --->YAB1      <---------ATHB12     --------->MYB52(1)<------ZmHOX2a(1)                       ------- -->ICU4  --------->YAB1       <----------ID1 <---------At5g28300                    --------->TOE2(3)   tgatgattataatgacaatgatgagtatagtgagggacaaacagttgttactgtgaggatgcttgtgccttctgatcaaattggttatcttattggcaaa  935700                     <---------ANAC55(2)                     <---------ANAC46                                  ------->MYC3                     --------->ANAC55(2)                              --------->O2        --------->ATHB51                       <---------ZAT6         --------->TGA1a        --------->AHL20(2)                   <---------ANAC46         <---------O2        -------->ATHB1                       <---------ANAC58         <---------TGA1a       <---------ATHB51                      <---------ANAC58    -------->P  <----------DOF2       <---------ATHB12      --------->ZAT6 <-------TEIL--------->ICU4==================bZIP_DOF       --------->ICU4<---------ANAC58     <---------ARR14(2)     ===============MYC_MYB      <------- ------->ALFIN1      <---------ANAC58     <---------GLK1(2)  --------->GLK1(2)              <-------- ---->DAG2          ------>NtERF2         --------->ARR14(2) <-----------ARR10              --------- --->DOF2       --------->ANAC46        ----------->ARR10--------->YAB1<-------MYC3       --------->YAB1   ggtggaccaattattcaaacgctgcgtaatgacactaatgctcagattcgtgttagaaatgataatctacccatgtgtgctttggcattgagtcatgatg  935800  Previous    Next  AGI:  At2g03110.1    Description:  nucleic acid binding. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G14170.1); similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G14170.3); similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G14170.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15006.1); contains InterPro domain K Homology; (InterPro:IPR004087); contains InterPro domain K Homology, type 1; (InterPro:IPR004088) Range:  from: 935335    to: 936638    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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