Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------AHL20(2)                                                      --------->ARR14(2)                                                      <---------ARR14(2)                                                    --------->LBD16                                                   <---------ANAC58                                                   --------------->AGL15                                                   <---------------AGL15                                                   <---------ANAC55(2)               --------->YAB1                                                   <---------ANAC46  <---------AHL20(2)                                                   <---------ANAC55(1)               --------->AHL20(2)            --------->ANAC55(1)                    <---------ANAC58  --------->AHL20(2)            --------->ANAC58                      ----------------->AGL3          --------->YAB1            --------->ANAC46              <---------AHL20(2)     --------->AHL20(2) <---------YAB1<--            --------->ANAC58             --------->AHL20(2)  --------->CCA1(2)   <---------AHL20(2) ---------->DOF2                <---------GLK1(2) <-----------------AGL2  <-----------GT1--------->DAG2 ------->ANAC58             ---------->DOF2   <---------ICU4<---------ARR11(3)   --------->AHL20(2)<- ------->ANAC46    <---------AHL20(2) <---------AHL20(2)    --------->ARR11(3) --------->TOE2(3)  --- ------->ANAC58    <-----------GT1----------->GT1 ----------------->AGL2 <-----------GT1---------->DOF2   caagaaagtttcacacgaaatttacttacaaaaagattgtttatttaatacttccgtatatagatatataaatatttaacacattaattataaagttcaa  873100                                    <---------YAB1                                  -------->ATHB1                                  <---------ICU4                                  --------->YAB1                                            <--------        <-----------GT1          <---------ATHB51                                           ---------   <---------AHL20(2)            <---------AHL20(2)                                         ---------  <---------WOX13(1)             --------->ICU4                 ---------->DOF2            --------->ICU4 -------ARR11(3)          <---------At4g35610                  <------ZmHOX2a(1)           <---------YAB1 --------YAB1  <----------DOF2   --------->AHL20(2)          <---------TOE2(3)          <---------AHL20(2) ------>ARR11(3)          --------->At4g35610           --------->ICU4           ----------->GT1   gataattgattatctatctttttttgtcatctgaaattattatcgctcaaacgaagtaattctgaggaaagttgtttacaaactagttatttcattattg  873200                               <---------ANAC58                                                 <----                               <---------ANAC58                                                 -----                          --------->ATHB51                                                      >>>>>                          --------->ATHB12                                                      -----                          <---------ICU4                                                        >>>>>                          -------->ATHB1                                                        -----                         --------->AHL20(1)                                                     <----                         <---------ATHB51                                                       -----                         --------->ICU4                           --------->TOE2(3)             >>>>>                      --------->AHL20(2)                    --------->TOE2(3)                   <----                      --------->AHL20(1)                   --------->ATHB12                    <-----       <---------YAB1 <---------AHL20(2)                   --------->YAB1                      ------       <---------AHL20(2)<---------AHL20(2)                <---------ICU4               --------->ARR11(3) -ICU4--------->AHL20(2) <---------YAB1                   --------->ICU4                <---------ARR11(3) >ATHB12             --------->AHL20(2)                   <---------ATHB12            --------->MYB59 >ATHB51        --------->AHL20(2)                    --------->AHL20(2)    --------->AHL20(2) <-----   tctacttatataatagaattaaaaaaaattattgcttaatgcaatttagttttagataaaatcattaaacttaatagattatataagttagatatcaata  873300                                            <---------ANAC58       <---------ANAC58                     <---------ANAC55(2)       <---------ANAC46                     <---------ANAC46       <---------ANAC58                     --------->ANAC55(2)   <---------ANAC58                         <---------ANAC58   <---------ANAC58                      <---------MYB52(1) -----ICU4                              <---------RAP2.6(3) ---->ATHB12                            <-----------HVH21 >>>>>AGL24                             <-------GAMYB ---->ATHB51                   --------->ATHB12 >>>>>AGL20                    --------->ATHB51 ---->YAB1                    <---------YAB1<---------ANAC55(1)      --------->MYB46(3) ----ATHB1                    <---------AHL20(2)             <---------HSFB2a(1) --->ATHB1                 <---------AHL20(2)                <---------HSFC1(2) >>>>>AGL22                --------->AHL20(1)                --------->HSFC1(2) --------ATHB5             <---------AHL20(1)          --------->MYB52(1) ----ATHB12                --------->AHL20(2)  <-------TEIL ------->TEIL          <---------TOE1(3) --->ICU4               --------->AHL20(2) --------->MYB52(2)--------->HSFB2a(1)  ------->TEIL      < ----ATHB51     --------->TOE2(3)      <---------MYB46(3)<---------MYB52(2)      <---------DOF5.7(2)-   attgggcttgcttaaaaacataaatataaaatattattgggccgttacgtgcatacaaaacgaaccttctaacaaacaagtgtgaacgttacgacttcaa  873400                             --------->ANAC58                             --------->ANAC46                             --------->ANAC55(1)                             <---------ANAC55(2)                             --------->ANAC55(2)               --------->MYB46(3)        <---------YAB1                                          ----          --------->ANAC46   --------->ANAC58     --------->GLK1(2)              <---------ANAC55(2) ---------AHL20(2)         <---------ALFIN1      <---------GLK1(2)  --------->AHL20(2)        <------ -------->AHL20(2)        <---------REM1(2)     <---------At4g35610 <---------AHL20(2)    <-------TEIL   aattaaaaaaaaacacaacaactatgtccacacgtaatctcatatgattcagattccaaggagaacaaaattaaaaacaaatctcgtaaacatacataca  873500                         <-----------GT1               --------->ARR14(2)                       <----------TaMYB80              <---------ARR14(2)                      ---------->TaMYB80               ------->TEIL   <---------ICU4          -------                   ----------->GT1         --------->GLK1(2)          --------->ATHB51        <------                 <-------TEIL             <---------GLK1(2)           <--------HAHB4         <-------     *TSS    --------->DAG2    ---------->DOF2     <---------TOE2(3) --------->ICU4          -------- ----->ANAC46<---------------AtSPL8    --------->LBD16<---------CCA1(2) <---------YAB1       <------- -TEIL     ---------->DOF2  --------->TOE2(3) <----------DOF2        <---------YAB1  <------ZmHOX2a(1)   cttcacataaaacaaaaggtacagtatataccataaatctccgagattcttttgatgtatctgtccatttcattattacacaaactaggaaactgatatc  873600                                                    ------->GAMYB                                         <-----------GT1     <-----------GT1                --------->AHL20(1) -->ARR11(3)                        <---------ARR11(3) ---ARR11(3)                        --------->ARR11(3)                        <-----------GT1 --CCA1(2)                   <----------DOF2       --------->MYB46(3)------->GAMYB ->GLK1(1)   <---------At4g35610   <---------AHL20(2)        --------->TOE2(3)--------->YAB1 --GLK1(1)   ------>ZmHOX2a(1) --------->AHL20(2)<-----------GT1  <-----------GT1   tctctattcacattcctctgattctatttctctttatatatattcacccattaaccatctcaatcttataaccctcaaaatcacaatcttctcttacaaa  873700                            --------->ATHB12                            <---------ICU4                                                    <------                         --------->YAB1                                                       -------                      --------->HSFB2a(2)                                                     -------                --------->GLK1(2)                                                             <------               <---------ARR14(2)                                                      <---------At4g35610               <---------GLK1(2)                                 <------------------------ANAC81  <--               --------->ARR11(3)                       <---------ICU4                 --------->At4g35610               --------->ARR14(2)                 --------->ANAC55(2)                  ------>ZmHOX2a(1)               <---------ARR11(3)<---------YAB1  <---------HSFB2a(2)             <<<<<<<<<TBF1<------             <---------YAB1<---------YAB1        --------->HSFB2a(2)       <---------At4g35610<------   aaactttgaaagatgaagattcttctagcatcattgtgtttgatcagtcttctcgtaatcttgccttctgtcttctctgcttcttcttcctctgaagatt  873800                                 <---------ICU4                                <---------ATHB12                            <---------AHL20(2)                            --------->AHL20(2) ---ARR14(3)          --------->ANAC58 -->ARR14(3)          --------->ANAC58 -->ARR11(3)          --------->ANAC46                          --------->YAB1                 <----- ---ARR11(3)          ----------->GT1   <---------TOE2(3)      <---------YAB1                  ------ -------YAB1          --------->ANAC55(1)                    --------->YAB1             <---------AHL20(2) ---GLK1(2)           --------->ANAC55(2)            <---------YAB1--------->YAB1      <----------DOF2 ---ARR14(2)          <---------ANAC55(2)          <---------At4g35610            <---------ANAC46   ttgatttcttctacttcgtccaacaagtaataaaatcattctaagaatgtttctgatgattttttataatcatctaatattgttttgtgttttattgtat  873900                                                                <---------------AGL15                                                                --------------->AGL15                                                               <-----------------AGL1                                                               <-----------------AGL3                                                               <-----------------AGL2                                                              --------->At4g35610                                                              <---------At4g35610                                                           <---------ZAT2                                                           --------->ZAT2                                                           <---------At4g35610         --------->YAB1                                    --------->At4g35610        <------ZmHOX2a(2)                             --------->ANAC58       <---------ARR11(3)                             --------->ANAC58                            ---       --------->ARR11(3)                         --------->ANAC46                  <----------DOF2      <------ZmHOX2a(1)         --------->ALFIN1  --------->ANAC58               <---------ARR11(3) ----ZAT14             --------->ANAC46           --------->ANAC58           --------->YAB1  xxxxxxxx --->ZAT14      ----------->HVH21                 --------->AtLEC2          <-------TEIL  <---------MYB59   agtggccaggatcatactgtgacacacagaagaagtgttgttatccaaattcaggcaaaccagctgctgattttggcattcatggtctttggcctaacta  874000  Previous    Next  AGI:  At2g02990.1    Description:  RNS1 (RIBONUCLEASE 1); endoribonuclease. Identical to Ribonuclease 1 precursor (RNS1) [Arabidopsis Thaliana] (GB:P42813;GB:A0MEM0;GB:Q1PF62;GB:Q42188;GB:Q6LAC8;GB:Q8LC78); similar to ribonuclease T2 family protein [Arabidopsis thaliana] (TAIR:AT1G14220.1); similar to ribonuclease T2 [Cicer arietinum] (GB:CAA10130.1); contains InterPro domain Ribonuclease T2; (InterPro:IPR001568) Range:  from: 873505    to: 874810    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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