Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------TOE1(2)                                                       <---------ANAC46                                                       <---------ANAC58                    --------->CCA1(2)                  <---------ANAC58                   <---------ARR14(2)                  --------->ANAC55(2)                   --------->ARR11(3)                <---------ANAC58               <---------ZAT14                       <---------ANAC46               --------->ZAT14                <-------TEIL                      <---------ANAC46         <---------ALFIN1                    --------->CCA1(2)                  <---------ANAC58         ----------->RAV1(1)  ------>MYB83  --------->ARR11(1)                  <---------ANAC58      --------->ANAC46        ------>MYB46(1)--------->ARR14(1)  <---------ARR14(2)--------->ARR14(2) ----->DOF2--------->ZAT6    --------->MYB52(1)      <---------ANAC58  <---------MYB52(1) ->DOF2 --------->ANAC46   --------->MYB46(3)--------->GLK1(2)   --------->ARR14(2)<---------ARR14(2)   aagagaacccccaacactacagatatagaaccaactgttaacaagagattcgatttcgcgtgtttcgaattcggttttgttagcgtataggtcgatgaag  867900                          <---------HSFB2a(2)                          --------->HSFB2a(2)                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                       --------->ARR14(2)                       ------->TEIL                  --------->MYB52(1)               <---------HSFB2a(2)               --------->HSFB2a(2)                  --------->GLK1(1)              <---------LBD16                      --------->ARR14(2)              ----------------->AGL1               <---------ARR14(2)           <---------ARR14(2)                 <---------ARR14(2)           --------->ARR14(2)                 --------->ARR14(2)         <---------DEAR3(2)               <-------TEIL<-----------GT1                           <----     --------->ABI4(2) --------->ARR11(3) ------>ZmHOX2a(2)                                    ------     <---------ZAT2    <---------AGP1   <---------ARR14(2)                                    <------ZmHOX2a(2)     --------->ZAT2    <---------ARR14(2)<------ZmHOX2a(2)                                   <------- <---------DEAR3(1)    --------->GLK1(2)--------->ARR14(2)                       <<<<<<<ZML2 --------   aagacggtgctcggttcccagaacggatctggaacttaatcggatccatatcggatttactactactactattcttcaccctagaacgggcatgagatcg  868000                                                     <---------HSFB2a(2)                                                     --------->HSFB2a(2)                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                   --------->CCA1(2)                                                  <---------ARR11(3)                                                  --------->AGP1                                                  --------->ARR14(2)                            <----                       --------->O2               <---------ARR14(2)                            <----                       <---------O2               --------->ARR14(3)                            <----                      ------>NtERF2               <---------ARR14(3)                      <---------AHL20(2)                  --------->ANAC58                --------->ARR11(3)                     <---------AHL20(1)                  --------->ANAC58                <---------AGP1                         --------->AHL20(1)                  --------->RAP2.6(2)           ----------->ARR10                      <---------AHL20(1)                  ------->GAMYB             --------->YAB1                         --------->AHL20(2) -------HVH21     --------->ANAC46     <---------MYB52(2)                          <---------AHL20(2) >ZmHOX2a(2)      --------->DEAR3(1)  --------->ANAC58                            --------->AHL20(2) --ARR11(3)      --------->MYB46(3)   --------->ANAC58                ----------->GT1  --------->AHL20(1) ->ARR11(3)    --------->ARR14(2)     --------->ANAC46        ----------------->AGL3--------->AHL20(2)   tcgcatcaacaattcaaaaaccgccacgagaacgaagaacaaggaaccataagatctggaagaattcaaatatggaaaattgaaattaatatatattttc  868100                                                                                                    <                                                                                                    -                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                   <---------DEAR3(1)                                                                                   --------->DEAR3(1)                                                                                  <------NtERF2  <---                                                                            --------->MYB46(3)   <---                                                                         --------->WRKY38(1)    <----                                                                        <---------MYB52(1)      -----                                                                        --------->DOF5.7(2)     -----                                                                       <-------GAMYB            -----                                                                     <------NtERF2<---------LBD16----                                                                     --------->RAP2.3(1)        <----                                                                    ------>NtERF2<---------RAP2.3(1)-                                                                    <---------ATERF1(1)         -----                                                                    <------NtERF2------>NtERF2  -----                                                                   --------->RAP2.6(2)         ------                                                                   --------->DEAR3(1)          ------                                                                   <---------DEAR3(1)          ------                                                                   --------->RAP2.3(2)         ------                                                                   --------->RAP2.3(3)        <------                                                                  --------->DEAR4(2)          -------                                                                  --------->ATERF1(1)        <-------                                                                  --------->ERF1--------->DEAR3(1)---    <-----------GT1              <---------YAB1                   <---------RAP2.6(2)     --------->ZAT2 -----ANAC58       <----------DOF2             <---------ZAT14    --------->RAP2.3(1)     <---------At4g35610 -----ANAC46 <-----------GT1   <----------DOF2 <---------ARR14(2)--------->ATERF1(1)   ---------->DOF2 -----ANAC58<------------------------ANAC81    --------->ARR14(2)<---------ATERF1(1)--------->LBD16--   gtgaattttcgattttttcttctttttttgaagcttttattgaaccgagaatactggagattgagagggccgccgttaaccagcgccggtgaagctcgcc  868200 ---------At4g35610 ----->NtERF2 ------>ATERF1(1) ------>RAP2.3(1) ----NtERF2 ----->ABI4(1) ------ATERF1(1) ------RAP2.3(1) -----DEAR3(1) ---->DEAR3(1) ---->RAP2.3(3) ---->ATERF1(2) -->NtERF2                                                                              *TSS -----ATERF1(2)                                                                      --------->AHL20(1) -------->At4g35610                                                                  <---------AHL20(1) ---->RAP2.3(2)                                                          --------->AHL20(1) ---->ANAC46                                                             <---------AHL20(2) --->ATERF1(1)                                     ---------->DOF2       --------->AHL20(2) --->ERF1                                         --------->AHL20(2)    --------->AHL20(2)      <---- --->RAP2.3(1)                                 --------->YAB1   ----------->GT1      --------->AHL20(2) --->DEAR4(2)                                --------->AHL20(2) --------->ANAC58     <---------AHL20(2) ---ATERF1(1)                               --------->YAB1      --------->ANAC58    --------->AHL20(2) ---------------->TaNAC69(2)             --------->YAB1        --------->DAG2       <---------AHL20(2) --DEAR3(1)             <---------HSFB2a(2)--------->AHL20(2) ---------->DOF2 ----------->GT1 <------ ------>DEAR4(2)   <---------ANAC58    --------->AHL20(2)  --------->AHL20(2)----------->GT1 -------- ------->DEAR3(1)  <---------ANAC58   --------->YAB1    ----------->GT1 <---------AHL20(2)   <-------   gccgctctcaagtctccgatgtcgttctcggtgatagaaataaaaataaaaataaaagagattaaaaagcaaaattaaattggaaaataaattggtcgtt  868300                               <---------AHL20(2)                               <---------AHL20(1)                               --------->AHL20(1)                               --------->AHL20(2)                             <---------YAB1                           --------->YAB1                           --------->ATHB51                           <--------HAHB4                           <---------ICU4                           <---------AHL20(2)                           -------->HAHB4                           -------->ATHB1                          <---------YAB1                          <---------ATHB12                          --------->ICU4                          <---------ATHB51                      <---------MYB59                        <---------AHL20(2)                      --------->TOE2(3)                   *TSS   <---------ICU4          <---------YAB1------>MYB83 <---------YAB1   ----------->GT1     <----------DOF2 --------->ANAC55(2)       --------->ETT(1) --------->ICU4                  -----    <---------DAG2 <-----------GT1  ------------>CBF<---------ANAC46 <---------AHL20(2)      <------- -----REM1(1)   <---------YAB1<---------AHL20(2)<---------DEAR3(2)  --------->AHL20(2)       -------- -GAMYB <-----------GT1 ------>MYB46(1)      <-----------HVH21  <---------YAB1          <---------ICU4 ->MYB52(2)    --------->AHL20(2)  <-----------GT1<-----------HVH21 <---------AHL20(2) <---------YAB1 --MYB46(3)    <-----------TBP--------->AHL20(2)<---------MYB46(3) <---------YAB1      --------->ICU4   gtagcgccttttacgatttttatacctaattattaaattacaattcgggtcgggtcgggttatttgattattaattttgcaatcgggtcatgatcacata  868400                                                                                              <------         <---------MYB52(1)                                                           --------->YAB1         --------->DOF5.7(2)                                                  <---------At4g35610        --------->TOE2(3)           --------->YAB1                     <---------ARR11(3)    <-------  <---------ANAC58  <---------ARR14(2)                                 --------->ARR11(3)  --------->YAB1  <---------ANAC58  <---------ARR11(3)      --------->At4g35610        --------->ARR14(2) <---------YAB1 ---->MYB52(1)      --------->ARR14(2) --------->YAB1                 <---------GLK1(1)  --------->ARR11(3) --ANAC55(2)   ------>ZmHOX2a(1)    <---------ICU4                    --------->GLK1(1)  <---------ARR11(3) ->ANAC55(2)  --------->TOE2(3)    --------->ICU4          <----------DOF2    --------->At4g35610   acaggcttatcgttatcctcaagatttgtcagtttgaataatgagaagctcaaaatcagagctttaatggcgatatcttcagcttcactaatatcatcat  868500               --------->ZAT18               <-------TEIL              --------->DOF5.7(2)             --------->TOE1(3)                                       --------->GLK1(1)    --------->ANAC46                                                 <---------GLK1(1)    --------->ANAC58                                            <---------At4g35610    --------->ANAC58                                       <---------GLK1(2)                     ----  <---------ALFIN1                                --------->ANAC46<---------YAB1              <------ ---ICU4 <---------ARR14(2)              --------->At5g28300--------->ARR14(2)                <------ --YAB1  --------->ARR14(2)             ----------->GT1    --------->ARR14(2)                 -------   tctcacacgcagaaacgttcactaagcattcgaaaatcgacactgtgaatacacaaaacccgattcttctgatttccaaatgcaattctctaagagagct  868600                                                                       --------->ZAT14                       <---------CCA1(2)                       <---------AHL20(2)               --------->ANAC46                          <---------At4g35610               <---------ANAC55(2)                ---------->ID1       --------->ZAT18 ----->At4g35610    <------ZmHOX2a(2)   <---------HSFC1(2)     --------->AHL20(2) ---ZAT2       --------->ANAC58         --------->HSFC1(2) ----------->GT1                         <- ---At4g35610  --------->ANAC55(2)    --------->ARR11(3) --------->At4g35610        --------->MYB52(1) -->At4g35610  --------->ANAC58       <---------ARR11(3) <---------ZAT2<---------ZAT14 ------->GAMYB   gatgcaaattcaagcttacgcgatcaaatctcatattgaagatgtttccttcgtcgctaagctgataaatttctgcactgagtctccaacggagtcttca  868700                                                                                                 <---                                                                         <---------ARR14(2) ------>ZmHOX2a(1)                                                                     <---------TOE1(2)      =========                                                                   <-------PIF5         <---------ARR14(2)            <---------ALFIN1                                       ------->PIF5         ------->TEIL         --------->ANAC58                            <---------AHL20(2)  --------->ARR14(2) =========         --------->bZIP60(2)                     --------->ICU4   <---------TGA1a       --------->ARR14(2)         --------->ANAC46                     <---------YAB1      ==========================bZIP_DOF         --------->ANAC58               --------->ARR14(2)        --------->TGA1a    --------->ANAC58        ------->TEIL                    <---------ARR11(3)      <---------ANAC46     --------->ANAC46   --------->At4g35610                  <---------ARR14(2)      <---------ANAC58     --------->ANAC58 ----------HVH21                        --------->ARR11(3)      <---------ANAC58 <----------DOF2 <---   atgtcatatgcacgccacttgttcgaggcaatgtctgaaccagatattgtcatttttaattctatggctcgtgggtattctcgcttcacgaatcctcttg  868800  Previous    Next  AGI:  At2g02970.1    Description:  nucleoside phosphatase family protein / GDA1/CD39 family protein. similar to nucleoside phosphatase family protein / GDA1/CD39 family protein [Arabidopsis thaliana] (TAIR:AT1G14230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48377.1); contains InterPro domain Nucleoside phosphatase GDA1/CD39; (InterPro:IPR000407) Range:  from: 865069    to: 868288    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g02980.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G66520.1); similar to hypothetical protein OsJ_012382 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28899.1); similar to hypothetical protein OsI_013400 [Oryza sativa (indica cultivar-group)] (GB:EAY92167.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48375.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 868358    to: 870384    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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