Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->RAP2.3(1)                   --------->TOE2(3)                  <--------HAHB4         ================HOX2a_HOX2a                  --------->YAB1------>NtERF2             <---------DAG2  --------->LBD16             <---------LBD16    <---------ARR11(3)       <---------ATERF1(1)       ------->GAMYB    --------->ARR11(3)   ------->GAMYB   ------>ZmHOX2a(2) --------->LBD16   --------->RVE1(1)    <---------MYB55(2)             --------->AtMYB61                        <----   --------->CCA1(1)    --------->MYB46(3)            --------->MYB46(3)                     -------- ---->At4g35610  <---------YAB1--------->DEAR3(1)   <---------ALFIN1                         <------- -->YAB1  --------->ANAC58  --------->DEAR3(1)    ------>ZmHOX2a(1)          <---------YAB1  <------- ---ICU4  --------->ANAC58  --------->ATERF1(2)  --------->ANAC46   --------->LBD16     <---------YAB1 --YAB1 --------->MYB52(1)--------->MYB52(1) <---------At4g35610  <---------LBD16       ----------->HVH21   cagaaatatctaacgccttatcattaaccaccggcgactctgatctcatctcctcaacctccgcattaaccggagacatatgactgccatatgactgctg  864000                         <-----------GT1                    --------->YAB1                                                           --------                   <---------ATHB12       <---------ATHB51                             --------->ANAC58 -----At4g35610    <---------YAB1         --------->AHL20(2)                           --------->ANAC58 ->At4g35610      ------>MYB46(1)   ------>ZmHOX2a(1)                                --------->MYB52(1) --ZAT2           ------>MYB83   ------>ZmHOX2a(1)                            <---------GLK1(1) --At4g35610 <-----------GT1 ------>ZmHOX2a(1)     ------->GAMYB              --------->GLK1(1)   ctactctcagttaataaacctatcatttctccttcctcctccaaattattcaacgaaaaaatcgaacaaaaatccaaatgaaatccctaacgaaatcaga  864100                                                                      --------->LBD16                                                                      ------>NtERF2                                                                 <----------DOF2                                                                <---------ICU4         ------>ZmHOX2a(2)              --------->ARR14(2)    --------->GLK1(2)        --------->CCA1(2)               <---------ARR14(2)   --------->YAB1======================HOX2a_HOX2a        <------ZmHOX2a(2)         ----------->HVH21         <---------ATHB12       --------->AGP1            ------>ZmHOX2a(2)      --------->MYB46(3) <------ZmHOX2a(2)  -------       <---------ARR11(3)       <---------At4g35610--------->ANAC46  <---------LBD16      <------ZmHOX2a(1) ->YAB1--------->ARR11(3)      <---------AGP1    ----------->RAV1(1)<---------LBD16    --------->CCA1(2)   accatatgagatctaatctaatcgaattgaatcgatctgacatattcgaaaccacataaccaataatctttccggcgatcaaatcggagataggaatcag  864200                                                                        <---------ANAC58                         --------->GLK1(2)                              <---------ANAC58       <-----                        <---------GLK1(2)   ----------->GT1     <---------ANAC46               ------                    <-------TEIL          --------->At4g35610   <---------ANAC58               ------                   --------->CCA1(2)      ----------->RAV1(2)   <---------ANAC58              <------                  --------->ARR11(3) <---------ICU4      <---------ANAC46                <------ZmHOX2a(1) -->YAB1        <---------TOE2(3)    --------->YAB1    ----------->GT1 ---------->ID1 <------ZmHOX2a(1)   aaattgaaactcagatttaagatacagaatcgaagaaaatcatcacctgtaaaaatgttgtttatagcgttttgtcgtctctgaattaggaggagagaat  864300                                                                                              -------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                      <---------ARR11(3)                                                                                      --------->ARR14(3)                                                                                      --------->ARR11(3)                                                                                      <---------ARR14(3)       --------->TOE1(3)                                    --------->LBD16           --------->ARR14(2)       --------->TOE2(3)                                  --------->LBD16             <---------GLK1(2) ----ARR14(2)                                        <---------At4g35610         <-------TEIL-------- --->ARR14(2)                                        --------->At4g35610      <---------At4g35610 --->GLK1(2)  ---------->DOF2--------->CCA1(2)    ---------->DOF2             --------->At4g35610 ---GLK1(2) --------->MYB46(3)              <---------WOX13(1)              <-----------RAV1(2)   ctgtagaaacattaaccaaagagagagagagagacgagaagaactaattggtgaaagctccccagaaaattttctgaggcagatgcaagattttcccgca  864400                                                            --------->TGA1a                                                            <---------ANAC46                                                            <---------TGA1a                                                            <---------bZIP60(2)                                                            <---------ANAC58          <---------WRKY18(1)                                                            <---------O2             --------->WRKY45                                                            <---------ANAC58        <---------MYB52(1)                                                            ===============================MYC_MYB                                    ---------->DOF2         =====================bZIP_DOF ---------->DOF2      ------------>CBF          --------->LBD16             =====================bZIP_DOF--------->AtMYB61     *TSS                      <---------ANAC46             --------->O2            --------->DOF5.7(2) -->LBD16                <---------YAB1     <---------AHL20(2)        ---------->DOF2--------->WRKY12 ->LBD16              <---------DAG2==================================bZIP_DOF     --------->At4g35610 ->ANAC58             ================================================bZIP_DOF     <---------At4g35610 ->ANAC46             <----------DOF2       --------->AHL20(2)--------->ALFIN1     <-------GAMYB -LBD16--------->REM1(1)<-----------TBP----------->GT1--------->TOE1(2)           <---------MYB46(3)- ->ANAC58  ----------->GT1    <---------LBD16         --------->TOE2(2)--------->DAG2--------->WRKY38(1)   aatcgagctacaatagaaaaatcgctttttatagcggagaaaggaataaaatgaaaactacgacgtgtgagaaaaagtttatggccgttgaccaaagcga  864500                             <-----------GT1                                 --------->MYB52(2)                       ----------->GT1                          --------->DOF5.7(2)                   ---------->DOF2                             --------->TOE1(3)              --------->ARR14(2)                   ---------->ID1 <---------DOF5.7(2)              --              <---------GLK1(2)                  <-----------RAV1(1)--------->ANAC46     <------ZmHOX2a(1)              <---------ARR14(2)               <----------DOF2 --------->TOE2(3)  <---------ANAC46--- ---------->GT1--------->GLK1(2)     ----------->GT1     <----------DOF2     <---------MYB46(3)  <---   tgttgtaatttacacagattctaaagggtattttcggtattgtataaaactttgtcgcgctgtaacgttaacgacatgtttgttccctgtaggataacat  864600           <-----------GT1         <---------AHL20(2)       <---------YAB1      --------->AHL20(1)     <---------ICU4     --------->ATHB51     --------->AHL20(2)       --------->ICU4     <---------AHL20(2)     --------->YAB1                                    <---------WOX13(1)    --------->ICU4          <---------ICU4                                  --------->ATHB12  --------->YAB1           <---------ATHB51              --------->YAB1     <---------ICU4 <---------AHL20(2)        <---------ATHB12              <---------ICU4    <---------YAB1          <- --------->AHL20(2)      --------->YAB1             <---------------AGL15--------->YAB1       ------>ZmHOX2a(2) ------->TOE2(3)        <---------YAB1       <---------AHL20(2)          <---------ICU4     <-------- ------>YAB1      <---------YAB1 ----------->GT1   --------->TOE2(3)    <---------ATHB12<---------AtLEC2 ----TEIL--------->AHL20(2)--------->ICU4  <----------DOF2 ----------->GT1 --------->ICU4   ---------   tcattaattattttaatcttttgattacaataatgatgtaattttcttttatttcttaataatgtgatttataaatcatgattgggcaatgcatgatcta  864700                                  --------->AHL20(2)                                 --------->AHL20(1)                         -------->ATHB1                         <---------ICU4                         --------->ATHB12                         <---------AHL20(2)                         --------->ATHB51                         -------->HAHB4                        <---------YAB1                        <---------ATHB51                                    --------->ATHB51                        --------->ICU4                                      <---------ICU4                      <--------HAHB4                 <---------ARR11(3)     --------->YAB1      <----                      <---------ICU4     <---------At4g35610                <--------ATHB1      -----                --------->ANAC46 <---------AHL20(1)  --------->ARR11(3)    <---------YAB1      ------       --------->YAB1------------>ATHB5 <---------TOE2(3)       --------->ARR14(2)             <----- --------MYB46(3)    --------->ICU4     <---------TOE1(3)       <---------ARR14(2)  <---------ANAC46 -ARR11(3)      --------->ANAC58 --------->ARR11(3) --------->YAB1         --------->ICU4----------->GT1 >ARR11(3)      --------->ANAC58 <---------ARR11(3)<---------YAB1--------->CCA1(2)<---------ANAC46   gttgttcaatgacaaaccaaggcataattattgaaaatatttaagcttatggtatgatattaaacagatatgtgagaataattgttgtgtaagataaaaa  864800                  <---------ICU4          --------->YAB1       --------->YAB1<------ZmHOX2a(1)       --------->TOE2(3)     --------->YAB1 <---------------AtSPL8     <---------YAB1                        <---------YAB1 --------------->AtSPL8  --------->ICU4                       --------->AHL20(2)       --------->YAB1 -----AHL20(2) --------->ATHB12   <---------TOE2(3)  --------------->AtSPL8           <---------YAB1 ---->AHL20(2)<---------YAB1--------->ICU4           <---------HSFB2a(2)     --------->GLK1(1)    --- --->AHL20(2)<---------ARR11(3)<---------YAB1        --------->HSFB2a(2)     <---------GLK1(1)    <-- ----AHL20(2)--------->ARR11(3)--------->ICU4     --------->GLK1(2)--------->ATHB12<----------DOF2<--   aatttagtaccataatatcattaggacattatgattatggaaatagcttaaaattctagtaccattatatcattaggggatttctcttttgataagaacg  864900  Previous    Next  AGI:  At2g02960.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G14260.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G14260.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN70908.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Zinc finger, variant RING-type; (InterPro:IPR011016) Range:  from: 862086    to: 864405    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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