Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ANAC58                                     --------->ANAC58                                     --------->ANAC46                                   <---------ALFIN1                      <---------LBD16              <-----------GT1 --------->ANAC58       --------->ZAT2  <---------ARR14(2)        <---------At4g35610   --------->ANAC58       <---------ZAT2  --------->ARR14(2) <-----------RAV1(1)<---------MYB52(1)    ----------->HVH21        ----------->HVH21     <---------GLK1(1)   gaactgttgcagctattcaccagtttgttctgaagcaacacgctctgactattccagcttgattcagaccggacactcggagtaccagtagatttcttcg  856100                   <---------HSFC1(2)                   <---------DEAR3(2)                   --------->HSFC1(2)                   <---------MYB46(3)                   --------->HSFB2a(1)                  <---------DEAR3(1)                           --------->TOE2(3)                ------>NtERF2                                 <---------HSFB2a(1)               ----------->HVH21                      --------->ZAT6                     ------------               --------->DEAR3(1)                    <---------ZAT14                     <-----------   <---------At4g35610                               --------->ZAT14                     <-----------   --------->At4g35610                   <-----------HVH21  <<<<<<<ZML2                  ------------   cgctctgcttcgagtcgacgacggttctctcaacttctgggtttgtcagagacagaacactagaaccttggtctgaatccatgtctccattgaagtactt  856200                          =============HOX2a_HOX2a                        --------->ARR14(2)                        <---------ARR14(2)                        --------->ARR11(3)                        <---------AGP1         <---------ALFIN1 ------>ZmHOX2a(2) <---------At4g35610    <---------ARR11(3) --------->At4g35610   <---------CCA1(2) <---------ZAT2     <---------LBD16                                   ------>ZmHOX2a(1) --------->ZAT2 ------>MYB46(1)           <-----------GT1       ------>MYB46(1) --->AtSPL3     ------>MYB83        <----------DOF2             ------>MYB83 ----AtSPL3--------->ANAC58       --------->At4g35610         <---------MYB46(2)                   <- ----AtSPL8--------->ANAC46     <------ZmHOX2a(1)             <---------MYB111(2)                <--- --->AtSPL8--------->ANAC58  <-----------RAV1(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <--------   ctcagctccaaacacaccaatctctggatcttcaggagctttcttcaccattttcttctcatcaccaaactcctcttgttttggattaatgctcatgttt  856300         <------MYB46(1)         <------MYB83                                                                              <-      <---------AtLEC2                                    --------->ANAC58                     <-----      <---------ANAC46                               <---------At4g35610                  -----------      <---------ANAC58                    --------->At4g35610                         --------->At4g35610    <---------YAB1             ----------->HVH21     --------->At4g35610              <---------ZAT2 --------ZAT6                <---------ANAC58  <---------ANAC58       >>>>>>>>>TBF1   <---------ZAT14 ------ANAC46        <----------DOF2     <-----------ARR10--------->ANAC58            --------->ZAT14 -YAB1<---------ANAC58       <---------ANAC58  <---------ANAC58    >>>>>>>>>TBF1      <---------At4g35610   agtgttttgcttggttccatgagcttcttggtcgtgacaagagcatcttccttgctgctcaagtaagaagaagaagaaacatagagactgctgtgactgt  856400                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                            <--------  <---------YAB1     <---------ARR11(3)                   <-----------GT1                 <---------- --------YAB1        --------->ARR11(3)                <---------ZAT6          <----------DOF2   <--- --GAMYB         ---------->DOF2                     --------->MYB52(2)    <--------P  <---------AHL20(2) >HVH21        --------->YAB1                    <---------ZAT6       <----------DOF2<---------AHL20(2)   tgttattcttcatgaaatcaaaagatgtttttggggtactagcagaagatggtgttagtgtcaccattttctctttggtagctttatatttttttctctc  856500                --------->CCA1(2)               <---------ARR11(3)           --------->REM1(2)        <---------ANAC58    <---------ANAC46    <---------ANAC58    <---------ANAC58 --------ICU4  --------->ARR11(3) ------->ATHB12<---------ARR14(2) -------YAB1   --------->ARR14(2)       ----------->GT1         <---------At4g35610 ---GT1 <---------ANAC58     ----------->GT1           <---------YAB1                           <---- -GT1   <---------ANAC46    <---------TOE2(3)       --------->ARR14(2)                       -------- -------DOF2 ----------->ARR10       *TSS           <---------ARR14(2)                      ---------   tttattgcttgtgtgtagatatgtggaattagggtataaatagagtaacaagacgatatgtttgatagctgtttttttttttttttctgaagctaaaagt  856600                                                                            <---------AHL20(2)                                                                        <---------AHL20(2)                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                             <---------At4g35610     ------>ZmHOX2a(2)                                     --------->ZAT14 <---------AHL20(1)   <---------ARR11(3) <---------PCF2                <---------ANAC58    --------->AHL20(2)   --------->ARR11(3)<------MYB83                   <---------ANAC46--------->AHL20(2)      <-------- <---------YAB1      <---------DEAR3(2)      <-------GAMYB --------->ZAT18 --------->AHL20(1) -----ZAT6           <------MYB46(1) <------------CBF      <---------ZAT14<---------------AGL15    -- ->DAG2  <---------YAB1             --------->ATHB12<---------ANAC58<---------AHL20(2)    ------->TEIL ->DOF2  ------------>CBF----------------->AGL1<---------MYB46(3) <---------WOX13(1)   <---------YAB1   gttatgatctgatcaatgtgagtgggttccagtttgagtcattggccagttgttgtgtgtgtgaactgatttatttatatatttggataatgaatctttg  856700                                     ----------->HVH21                                    --------->LBD16            --------->YAB1                                    <-----------HVH21         <---------YAB1                                   =====================bZIP_DOF                                   =====================bZIP_DOF                                   --------->ANAC46        <---------YAB1                                   --------->TGA1a        <---------AHL20(2)                         <---------TOE2(3)                --------->AHL20(2)            --------->KAN4(1)      --------->O2           --------->AHL20(1)            <---------KAN4(1)      <---------O2          --------->YAB1                           --- <---------ATHB12     --------->AHL20(1)         ---------->DOF2 --------->CCA1(2)         <---------YAB1 -ICU4     <---------KAN4(2) <-----------GT1 ---------->DOF2--------->YAB1              --------->ICU4 ------->WOX13(1)    --------->YAB1<---------TGA1a      --------->ICU4               <------ZmHOX2a(1)   ccaatcaatggagaataatcgaaaaataatgttacccccgtgaccacaaaagaaaggaattataatgatatggtcttaattcgattaggacttattaata  856800                                           --------->AHL20(2)                                          --------->AHL20(2)                                          <---------AHL20(2)                                  ------>ZmHOX2a(2)                                 <---------GLK1(1)                                 --------->GLK1(1)                                --------->ARR11(3)                  --------->DAG2          <---------ZAT14       --------->ARR14(2)           <---------GLK1(1)          --------->ZAT18       <---------ARR11(3)           --------->GLK1(1)          <---------ZAT18       <---------ARR14(2)          <---------ARR14(2)          --------->ZAT14       <---------AGP1 <-----------GT1     ---------->DOF2 -------->RAV1(1)              <---------CCA1(2)     ----------->RAV1(2)                <-------TEIL   caacagtactagtatactactcacattgcaactggatctcttaaataattttctaacctgcagatttcagaaagtgtttttttttatacgttcaatattc  856900                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                               ------                                         --------->GLK1(2)                                     ------                                        <---------GLK1(2)                                ------>MYB46(1)                                      <---------YAB1                                     -------->P                                      <---------TOE2(3)                                  ------>MYB83      ------->TEIL  --------->ZAT6    <---------TOE1(3)                         <---------MYB52(2)  <---------------AtSPL8            <-----------GT1                 <---------YAB1     --------->AtMYB61   gtattttgtacgtagacgtttagcactactatacgtttttaagattccgatttaaaacacatttgctactatatttgtagcaactaaaaccaactccaac  857000  Previous    Next  AGI:  At2g02950.1    Description:  PKS1 (PHYTOCHROME KINASE SUBSTRATE 1). Identical to Phytochrome kinase substrate 1 (PKS1) [Arabidopsis Thaliana] (GB:Q9SWI1;GB:O80610); similar to PKS2 (PHYTOCHROME KINASE SUBSTRATE 2) [Arabidopsis thaliana] (TAIR:AT1G14280.1); similar to putative phytochrome kinase substrate [Solanum tuberosum] (GB:ABO93009.1); similar to Putative phytochrome kinase substrate 1, identical [Solanum demissum] (GB:AAT38757.1) Range:  from: 854946    to: 856537    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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