Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------ICU4 ------->YAB1 ---->YAB1                      <---------ARR11(3)             ---------->DOF2                   ---- ----AHL20(2)                   --------->ARR11(3)---------->DOF2                        --------->ANAC58 --->AHL20(2)               ---------->DOF2     <---------HSFB2a(2)                      --------->AtLEC2 -->AHL20(2)            ---------->DOF2 <----------DOF2      <---------YAB1              --------->ANAC58   ataatctccaaaactgagagaaaacaaaaagaaagacattttctttagttctcaaagcttaccatgaaagagtagtttatggccagagaacatgcaagag  849200                                                                   <-----------GT1                                                               <----------DOF2                                                            ------>MYB83                         ----                                                            ------>MYB46(1)                      <---              ---------->DOF2                             --------->AtMYB61                      ----        ----------->HVH21                                 <---------MYB59              ---------->DOF2  ---------->DOF2      ---------->DOF2         <-----------GT1 <---------DAG2    ----------->GT1<---- -------------------->ANAC81      ---------->DOF2     <----------ID1        --------->LBD16   -------   aagaaaaagagtgacacaaagaacaaaaagaaatgtgaaagcttcaatttcacaatacgaccaaactttttgcctctccgaagaagtaaaaaagaattat  849300      <-----------RAV1(2)        >>>>>>>>>TBF1 ----->YAB1                   >>>>>>>>>TBF1                      --------->TOE2(3) ------ICU4                >>>>>>>>>TBF1                    <---------MYB52(1) ----->ATHB12       --------->CCA1(2)                      ----------->GT1   ------>ZmHOX2a(1) -----YAB1         --------->ARR14(2)                      --------->LBD16  --------->TOE1(3) -->YAB1           <---------ARR14(2)                    <---------LBD16    --------->TOE2(3)       <   cattgtgaccagatggattcagatatgaagaagaagaagaaaacaccgtgcttcttctctccggtaacattatctaatccttaaacactgcaaaaaatca  849400          --------->GLK1(1)         <---------ARR11(3)         --------->ARR11(3)                                                  --------->GLK1(2)    <---------ATHB12                                               <---------GLK1(2) --------->ANAC46  ------>MYB46(1)                      <---------ATHB12            --------->ARR14(2)--------->ANAC58  ------>MYB83                    <---------At4g35610              <---------ARR14(2)--------->ANAC58 ---------MYB59            --------->GLK1(2)--------->YAB1     <-------TEIL <---------GLK1(2) -------   gaccaaatcaagatttctatgtctgagagaagcttaagctaatcaaacatagacaaaatccaagatgcagatttggaagaatctctcacacaaacccaga  849500                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                  --------->GLK1(1)             <------NtERF2                                                 <---------ARR14(3)      ----------->RAV1(2)                                                 <---------ARR11(3)     -------->P                                                 --------->ARR14(2)     ------>MYB83                                                 --------->ARR14(3)     ------>MYB46(1)                                                 --------->ARR11(3)     --------->MYB52(1)                                                 <---------ARR14(2)    --------->MYB55(1)                                               ----------->ARR10      <---------MYB111(1)                                        ---------->DOF2               <---------MYB59                                       ----------->HVH21--------->At4g35610   <---------DEAR3(1)  <--                ----------->GT1      ----------->RAV1(2)<---------At4g35610<-----------RAV1(1)   *TSS -->LBD16    ---------->DOF2     <----------DOF2 <---------AGP1       <---------MYB46(2)         ----   aaacaccagattagagaaaggaaataacaaaaactctttacctgaagcgaagatctctagctcaccatgaaacctacctggtggcgatttagaactgtat  849600                          --------->YAB1              <---------ZAT6          <---------At5g28300                                                        <---------AtMYB61         <-----------GT1 <---------AHL20(2)                                        ==================        <---------YAB1   --------->AHL20(2)                                        <----------DOF2 <-      <---------ICU4 <---------AHL20(1)                 <---------AHL20(2)     --------->DAG2   -----    <----------DOF2  --------->AHL20(2)                --------->AHL20(2)    ---------->DOF2    -----   --------->TOE2(3) <---------AHL20(2)                <---------AHL20(2)    ======================== -------AHL20(2)     --------->AHL20(1)               <---------WOX13(1)============================= ----->ICU4   ----------->GT1<---------ICU4   <------------CBF          ---------->DOF2---------->ID1   ttattcctttattacagtgttaattaattaataatgtattaatgtccaaattgttgattaatttgtacgaaggctaaagaaaaggctttggtgtttttgt  849700                                                                                                    <                                                                                                   -- <---------ALFIN1                                                                               xxxxx ==========================================MYC_MYB                                              xxxxx --------->TGA1a                                                                         xxxxxxxxxxxx --------->ANAC46                                                                       <----------DOF2 --------->O2                                                                          <---------DAG2 <---------O2                               <---------AHL20(2)                         <----------DOF2 ==========bZIP_DOF                   <---------ANAC46                                xxxxxxxxxxxxxxx --------ALFIN1                     <------MYB83                                     ------>NtERF2 xx ----->ID1       ------->TEIL       <------MYB46(1)                                  ---------->ID1<- ---->PCF2    <---------YAB1       <---------AtMYB61                          <----------DOF2   xxxxx ==========bZIP_DOF                <---------MYB46(3)        ------->TEIL <---------CCA1(2)    xxxxxx ==========bZIP_DOF               <--------P<---------YAB1<---------WOX13(1)xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   cccacatcgctaaactatgaatcgctcgctcttggagttggtgtatataatagaagcttgatggaccgaagaattcatacctttctcggccttttggcta  849800                                                           --------->ANAC58                                                         --------->ANAC46                                                         <---------ALFIN1                                                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                       <---------ALFIN1                                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                   <-----------TCP11(1)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <---------ARR14(2)                    --------->At4g35610           --------->ARR14(2)                <---------PCF2--------->ANAC58           --------->GLK1(2)                ----------->TCP11(1)      <---------ZAT14                     --------->ALFIN1xxxxxxxxxxxxxxxxxxx>smallRNA(se3)      --------->ZAT14                   <-----------RAV1(1)--------->ANAC46      --------->ZAT18                xxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ------ZmHOX2a(2)                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------->ARR11(3)               <---------ARR11(3) <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxx>smallRNA(fl3)      --------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxx>smallRNA(i2)       xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxx>smallRNA(se3)      --------->RVE1(1) <---------At4g35610                             <--- xxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                       <------ --------ARR11(3)             xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --------->ZAT6           <-------GAMYB xxxxxxxxxxx>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)     <-----------GT1     ---------->DOF2 xxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ARR11(3) <---------TOE2(3)<---   agatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggccatcggcccacacgatattaactctattttttaagggagaaagcccgtta  849900                                                      <---------ANAC58                                                      xxxxxxxxxxxxxxxxx>smallRNA(se3)                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                  xxxxxxxxxxxxxxxx>smallRNA(s)                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                xxxxxxxxxxxxxxxx>smallRNA(s)                                                xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                               --------->ZAT14                                               <---------ZAT14                                               xxxxxxxxxxxxxxxx>smallRNA(s)                                               --------->ZAT18                                              xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       <---------ZAT18<---------ANAC58                                   <---------ANAC58------->PIF5                                   <---------ANAC58<-------PIF5                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                  xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)------>NtERF2                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC58                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->ANAC46                              <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->MYB46(3)                             <------NtERF2    xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    ------->GAMYB      xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->LBD16   <---------ANAC58        --------->DEAR3(1) xxxxxxxxxxxxxxxx>smallRNA(s)         ================HOX2a_HOX2a   <---------ANAC58       xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    -------->P   ---------->DOF2   ------>ZmHOX2a(1) ------YAB1               --------->ATERF1(1)xxxxxxxxxxxxxxxx>smallRNA(s)--------->YAB1     ------>ZmHOX2a(2) ---MYB52(1)        --------->YAB1<xxxxxxxxxxxxxxxxsmallRNA(s)<---------ALFIN1     ------>ZmHOX2a(1)< ------TOE2(3)   <----------DOF2xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC58<---------MYB59----   agatagcttgctatctgggctttcatgagtcgcccatgcgttgcactactgcacgggcctggctcaacccgccaattttaaagtcctaatttgatcctct  850000                                          --------->ATHB12                                         <---------AHL20(2)                                         <---------YAB1                                        <---------AHL20(1)                                   <-------        <-----------GT1           --------------------->WRI1                               --------->ATHB12   <----------DOF2                <----------DOF2<---------ALFIN1       <---------TOE2(3) <---------YAB1   <---------DAG2                 --------->TOE2(3)     <-----------------AGL1           ------>ZmHOX2a(2) -----------GT1   --------->TOE2(3)  --------->YAB1 <---------DAG2 <---------MYB46(3)  <---------AGP1 ----->YAB1    <----------DOF2 <-----------GT1<-----------GT1     <--------P------->TEIL<---------At4g35610   aataactttatttcagtctttcttaaaaacattttactttaatattattgaccactctttcgattttggtagttaatgtatatatcgttgatctgattga  850100  Previous    Next  AGI:  At2g02910.1    Description:  hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides. similar to EMB2756 (EMBRYO DEFECTIVE 2756) [Arabidopsis thaliana] (TAIR:AT1G34550.1); similar to hypothetical protein SDM1_41t00007 [Solanum demissum] (GB:AAT38717.1); contains InterPro domain Protein of unknown function DUF616 (InterPro:IPR006852) Range:  from: 847175    to: 849597    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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