Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->TOE1(3)                   <----------DOF2                              --------->TOE2(3)            <---------ANAC58                    <---------YAB1                         <---------ANAC58                  --------->YAB1                           <---------ANAC46                 <---------ATHB12                   <---------AHL20(2)           <-----------ARR10             <---------YAB1<-----------GT1         <---------AHL20(2)     ---------->DOF2 ----->REM1(2) --------->WOX13(1)          <------ZmHOX2a(1)  <---------ZAT18    --------->ARR11(3) -   gtatgcaaaacatttatcaatcatatttgtaacctttaaactataggaagttttttatttgtcgtgtgctttatacaaaagcacatcttgcccatactta  827400                                                                                         <---------YAB1                                                                                       <--------ATHB1                                                                                       <--------HAHB4                                                                                       --------->ATHB51                                                                                       <---------ICU4                                                                                       --------->YAB1                                                                                       -------->HAHB4                                                                                      --------->AHL20(2)                                                                                      <---------ATHB51                                    <---------YAB1     <---------ANAC58               --------->ICU4                 <-------TEIL  --------->CCA1(2)       <---------ANAC58               <---------YAB1             ----------->GT1  <---------ARR14(2)       <---------ANAC46             --------->YAB1          --------->CCA1(2)   --------->ARR14(2)  --------->MYB52(1)           ----------->GT1  --------->RAP2.6(2)   <---------STY1(1)      --------->TOE1(3)    ----------->GT1<---------YAB1 -------->At4g35610     --------->STY1(1)  ---------->DOF2    <----------DOF2<---------ARR11(3) xxxxx   gaagcagccatgatatggatacatccctagtggatatgaagattagaaagcttaactgcttgtggtttaagtgtaacaagatagtataataattactgaa  827500                                             ---------->DOF2                                          <----------DOF2                                        <------NtERF2                                       --------->LBD16                                       <---------DEAR3(2)                                       <---------ATERF1(1)                                      --------->ATERF1(2)                                      <---------ATERF1(2)                                      --------->DEAR3(1)                                      <---------DEAR3(1)             <---------ALFIN1                                     <------NtERF2                   --------->ANAC46                                     <---------LBD16                 ----------->RAV1(1)                                     --------->ATERF1(1)            ------->GAMYB                                     --------->RAP2.3(1)           --------->MYB46(3)                                     --------->DEAR4(2)           --------->ANAC58       --------->CCA1(2)                                    ------>NtERF2                 --------->ANAC58      --------->ARR14(2)                                    <---------ATERF1(1)           -------->P            <---------ARR14(2)                 <---------ANAC46   <---------RAP2.3(1)           ------>MYB46(1)   <-------TEIL          <------ZmHOX2a(1)        --------->DEAR3(1)             ------>MYB83<---------DOF5.7(2)      ---------->DOF2<----------TaMYB80------>NtERF2      <---------MYB52(1)  ---------->DOF2 --------->ATHB12----------->GT1   <---------DEAR3(1)    <----------DOF2    --------->DOF5.7(2)     - xxxxxxxxxxxxxxxx>smallRNA(si3)  <-----------HVH21      <----------DOF2    --------->TOE2(3)    <----   gcttgattaaaaggatgtgaagtatataccaagaacgtcgccggctctaaagtgtttgcctttaggccaacccacagcgttaaaggtccagataccagag  827600                                                                                                xxxxx          ------->TEIL                                                                          xxxxx        --------->REM1(2)                                                                       xxxxx   ------>MYB83                                                                                 xxxxx   ------>MYB46(1)--------->At4g35610        ----------->RAV1(1)                                xxxxx  --------->MYB55(1)                        --------->REM1(1)                                  xxxxxx  --------->ORA47(1)                        --------->MYB46(3)                                XXXXXXX <---------MYB46(2)              --------->At4g35610                                         -------- --------->DEAR3(1)              <---------At4g35610                                --------->ORA47(1) <---------MYB55(2)     ------->TEIL   --------->ANAC58                             ------>NtERF2 ----------->HVH21--------->ZAT2 --------->ZAT2    <-----------HVH21               --------->DEAR3(1) --------->DEAR4(1)   <---------WRKY18(1) ----------->RAV1(1)                      ----------->HVH21 --------->MYB46(3) <----------DOF2    --------->ANAC58                            <---------ETT(1) -------->DEAR3(2)<---------ZAT2 <---------ZAT2   ----------->HVH21               --------->DEAR3(2) -------HVH21     <---------At4g35610  --------->ANAC46                          <---------At4g35610   tcaccgaccgtgtacgttgcagcttgaacgtagtcagcttgaagcaacaacactgacacagccatgagagtcactatggctcgagccgaccatgatgcac  827700                      --------->ARR11(3)                    ------>ZmHOX2a(2) xxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxx>smallRNA(i) xxxxxxxxxxx>smallRNA(le3) xxxxxxxxxx>smallRNA(s) ------>ZmHOX2a(2)                                 <------ZmHOX2a(1) XXXXXXXXXXXXX>MIR408 <---------ARR11(3)                                <---------TOE2(3) ->ZAT18<---------MYB52(1)                 ---------->DOF2      ----------->GT1       ----------->GT1   tgcctcttcccttggccattgatcgatcttaggtgaaagtttagagaaagagagagaaactatagagagtaaatgaggatgaattgaagagtaaatgtac  827800                                                       <---------ANAC46                                                       <---------ANAC58                                                       <---------ANAC58                                                   <------------CBF                                                 --------->AHL20(1)                                                 <---------AHL20(1)                                                 --------->AHL20(2)                                                 <---------AHL20(2)       <---------ARR11(3)<--------                                                --------->AHL20(2) --------->ANAC58        <---------AHL20(2)                                            --------->AHL20(2)     --------->ANAC58        <---------AHL20(1)                                            <---------AHL20(2)     -------->P            <---------YAB1                                            --------->AHL20(1)   --------->MYB46(3)    --------->YAB1           *TSS>>>>>>>>>TBF1  ------------>CBF  <---------AHL20(2)------->GAMYB   <-------TEIL      -        ---------->DOF2   --------->ARR11(3)<---------AHL20(1)   <---------MYB111(2)  --------->AHL20(2) ----------->GT1----------->GT1         <---------AHL20(2)       <---------MYB55(2)   <---------AHL20(2)   aaagggtttttaaagaagaagaaaataagacattcaatgtttttattttattaaattgggtgtctcaacaacccatgatatatgttcatttattattttt  827900                                                        --------->ATHB12                                                        --------->ATHB51                                                        <---------ICU4                                                       --------->ICU4                                                       <---------YAB1                                                    ------------>ATHB5    <------MYB83   <------------CBF                               ---------->ID1          <------MYB46(1) -YAB1                                       <----------DOF2             --------->MYB59  --------->ZAT6 ---------->RAV1(1)    <---------YAB1    <---------MYB52(1)      --------->CCA1(2)      <-----------GT1   ggccacattgtctatgtagaaattgattatagacttaacttcggtttcttttgtctcattattgaagataagagtttggttttgacattgttacactaag  828000                                                                                 --------->ANAC58                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                              --------->TOE1(2)                                                     --------->ZAT18          --------->TOE2(2)                                                     <---------ZAT18          ------->GAMYB                                              --------->ARR11(3)            --------->ANAC58                                             <------ZmHOX2a(1)              --------->ANAC46                                           <---------TOE2(3)                -------->P--------->CCA1(2)                                     --------->AHL20(2)                     --------->ANAC58       --           ==========================================MADS_MADS             ------->GAMYB          <--           --------------->AGL15     --------------->AGL15                <---------MYB111(2)   -----           <----------DOF2           <---------------AGL15                --------->MYB46(3)   ------       ---------->ID1               <-----------------AGL3                <---------MYB55(2)   ------   ttgaattttgtttctttgttttgaaaatgcttatatcaactaaataaggaacttgtggacaaagactatgtcatcaacaacccacgatatatgagcattt  828100                                          --------->ICU4                                          <---------YAB1 <---------YAB1                      <------MYB83 ------->AHL20(2)                    <------MYB46(1) -------YAB1                        --------->MYB59 ---->YAB1                   --------->CCA1(2) --->AHL20(2)               --------->ARR11(3) --->ICU4                   <---------ARR11(3)  <---------------AtSPL8                     <---------YAB1   attatttatggacacattgtttctattggagatatagtttggttatgattttagtacatagtttataggcgaaaataggtttgaatttgtgttcttattg  828200                                               <---------TOE2(2)  <---------ZAT14                                               <---------TOE1(2)  --------->ZAT14                                         --------->ANAC46    ------>MYB46(1)                                  <---------------AtSPL8     ------>MYB83                        <-----------RAV1(1) --------->ATHB12--------->MYB52(1)                   ----------->GT1--------------->AtSPL8    ----------->RAV1(1)          <---------YAB1--------->ICU4<-------TEIL  ---------->DOF2   <---------ZAT6   <----------DOF2 --------->YAB1 --------------->AtSPL3  --------->MYB46(3)   aaatgctttgttatattagtatggtaatgttgggaaaacgtacacatcataggttaaagaaccaacagtattgtgttattagattggactattgagtttg  828300  Previous    Next  AGI:  At2g02850.1    Description:  ARPN (PLANTACYANIN); copper ion binding. Identical to Putative basic blue protein precursor [Arabidopsis Thaliana] (GB:Q8LG89;GB:O64499;GB:Q8S8T5); similar to plastocyanin-like domain-containing protein / mavicyanin, putative [Arabidopsis thaliana] (TAIR:AT5G26330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24755.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 826403    to: 827811    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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