Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->At4g35610   --------->CCA1(2)    --------->At4g35610  --------->ARR14(2)    <---------YAB1                                           ---------->DOF2  --------->ARR11(3) <------ZmHOX2a(2)                                     --------->GLK1(2)  <---------ARR11(3)--------->ARR11(3)                                    --------->ARR14(2)      ---  <---------ARR14(2)<---------ARR11(3)       --------->ARR11(3)           <---------ARR14(2)      <-- -ZAT2        ------>ZmHOX2a(1)       <---------LBD16                     <---------GLK1(2)       --- -At4g35610   ==============HOX2a_HOX2a --------->LBD16            <----------DOF2               <---   tgaagatttgataatcctctgagatcatcagagacaaaaccccagaacatattgtctcttaaaacaaggcttttcagattcttcaaagacacaatctctt  784200          --------->LBD16    --------->KAN4(2)   <---------HSFC1(2)   --------->HSFC1(2)   <---------HSFB2a(1)   --------->HSFB2a(1)  <-----------ARR10                                                        <------ZmHOX2a(1) <---------GLK1(2)                                                  --------->ARR11(3) ------>HSFB2a(2)                                              <---------ZAT6 -------HSFB2a(2)                                  --------->At5g28300------>ZmHOX2a(2) ------>HSFC1(1)             <---------TOE2(3)   <---------DEAR3(1) <---------ARR11(3)           ---- ------LBD16                 <---------YAB1    --------->CCA1(2)--------->YAB1---------->DOF2--------   ctggaatcttcccagagatgaaattagagctaagattgagagactcaagagacggtgatagcttagtgatgatcttaggagaaagagaaccagaaattcc  784300                                                                                                    -                                                                                                    <                                                                                                    =                                                                                                    -                                                                                                   <-                                                                                                =====                                                                                                -----                                                                                               ------                                                                                   <---------AGP1 <--                                                <---------ZAT14     --------->HSFB2a(2)        ------                                                --------->ZAT14     <---------HSFB2a(2)     ---------         <----------ID1             <---------ANAC46       --------->YAB1 --------->At4g35610 <------ ----->LBD16       <----------DOF2 <-----------------------TaNAC69(2)--------->LBD16       <---------LBD16 ->GLK1(2)   ---------->DOF2   --------->MYB52(2)         <---------YAB1  <---------At4g35610--------   gagagaagtaagagacaaagtctttaagctcgatagttgtgtaagaagagtgaagagtttatgaaaacttccagagagcttactagttctgttcccggtg  784400             <---------ANAC46             <---------bZIP60(2)             <---------ANAC58             <---------bZIP60(1)             <---------ANAC55(2)             --------->bZIP60(1)             <---------TGA1a             --------->TGA1a             <---------O2 <---------MYB52(1) -------->At5g28300 -------GAMYB--------->O2 ======================MYC_MYB ---------------------->TaNAC69(2)                                      <-------GAMYB --------MYB46(3)                                                       <---------ANAC46        ----- ======================MYC_MYB <---------YAB1                           <---------ANAC58        ----- ------->AtMYB77           <-----------RAV1(2)                          <---------ANAC58       ------ ----->TGA1  --------->ANAC55(2)              <------ZmHOX2a(1)        <------MYB46(1) --------->ATHB12 -------ANAC46 ----------->HVH21        --------->ANAC58               <------MYB83   <---------YAB1 ----->HVH21 <---------ANAC58--------->At4g35610                       --------->MYB55(2)      ------ >LBD16   <---------MYB52(1) <---------At4g35610            ----------->HVH21         --------->ICU4 -----HVH21  <---------ANAC55(1) <---------GLK1(2) <---------SPL7      --------->MYB52(2)      <----- ->LBD16 <-----------HVH21<------NtERF2 --------->ANAC58 ------->TEIL  <---------MYB46(3)<---------WOX13(1)   acggttaactctgttacgtgaccatggaggcagatgattctcaaggaaggagacggacgaatgtgacagaagttggttgtatcagtccatgattgaagaa  784500    --------->ARR11(3)    --------->ARR14(2)  <---------GLK1(1)                                           ----------->GT1    <---------ARR14(2)  --------->GLK1(1)                                          ------------------ ---->GLK1(2)       --------->HSFB2a(2)                  ----------->RAV1(2)--------->HSFB2a(2) -->TEIL            <---------HSFB2a(2)                 --------->MYB52(1)  <---------HSFB2a(2) --->ARR14(2)   <---------ANAC46                     --------->At4g35610--------->ZAT18 --->ARR11(3)   <---------ANAC58                     <---------At4g35610<---------ZAT14          >>>> ----ARR14(2)   <---------ANAC58        <---------YAB1  -------->P      --------->ZAT14  ------------   cctgtggatattgtagttgcttctggatttcaagaagagtttgtgattcacttgaagctacctgagactcagagagtactggaagaaggaaaataagaag  784600                                                                                                    <  --------->DAG2                                                                                    < ---------->DOF2                  <---------ARR14(2)                                                - ------>ANAC81                    --------->ARR14(2)                      <---------GLK1(2) --------- >>>>>TBF1  ----------->GT1      --------->GLK1(1)           <----------DOF2               <---------YAB1 ------------>ANAC81             <---------GLK1(1)         ----------------->AGL1   ---------->DOF2 -   aagaaaagtgaaggaagataaatggatttgaagagaaatctgcatagtgaagatgtgttttgcctttagagaaacagaaactcactgaaagttatcattt  784700                 ------>ZmHOX2a(2)                 ========================HOX2a_HOX2a                =========================HOX2a_HOX2a                <------ZmHOX2a(2)               --------->AGP1               <---------ARR14(2)               <---------AGP1               --------->ARR11(3)               --------->ARR14(2)               <---------ARR11(3)                                                               -----   =====================HOX2a_HOX2a                                                          <-------   ====================HOX2a_HOX2a                                                           <-------   <------ZmHOX2a(1)              ===================HOX2a_HOX2a                      ------------>CBF ---------HSFB2a(2)               <------ZmHOX2a(1)           >>>>>>>>>TBF1         --------->ANAC58 ---------HSFC1(1)          --------->ZAT14                >>>>>>>>>TBF1            --------->ANAC58 -------->HSFB2a(2)         <---------ZAT14              ------------------------>ANAC81--------->WOX13(1) >YAB1 ---------->DOF2     <---------ZAT6               >>>>>>>>>TBF1     ---------->DOF2 <---------ATHB12 -------->HSFC1(1)         <---------ANAC46   <------ZmHOX2a(2)   ----------->GT1 ---------->DOF2   ttctaggaacaaagacagatctataggtagtgtagaggaaaactttggatcaagagaagaagaagaagaagtaaatgaaagtagaaaagccaattaaggt  784800                                                 <---------ICU4                                             <---------MYB46(3)       --------->TOE2(3)                                       <-------GAMYB                  --------->AtMYB61                                       <---------ANAC58               --------->TOE1(3)      <---------ICU4                   <---------ANAC58        --------->ZAT14     --------->ICU4                   <---------MYB46(3)<---------ZAT18     <---------ATHB12 --------->ARR11(3)   <---------ANAC46    <---------ZAT18 ------------>CBF     <---------ARR11(3) <---------MYB46(3) <------------CBF <------NtERF2  <----------DOF2       <------MYB83      --------->ZAT14 ---->ALFIN1  <---------ATHB12        <------MYB46(1)   <---------ZAT14                           --- --TOE2(3)    --------->ICU4         --------->MYB59<---------ICU4 <---------ALFIN1        ---------- --TOE1(3)------------>CBF           <---------AtMYB61  --------->ZAT18      ----------->HVH21 <-----   ggaggcaataaatgcaatctttaagttcttaaacttggtttggttgtttgttcattactgcacattgcacaacctcaacttgacagactgttttgcaatg  784900                                                                                            ---------                          <---------AHL20(2)                 <---------ARR11(3)       <----------DOF2                      --------->AHL20(2)                     --------->ARR11(3)      <---------ANAC58                      <---------AHL20(2)              --------->ZAT6                 <---------ANAC58                     <---------AHL20(2)              <---------TOE2(3)         <---------YAB1 ---->TEIL        <---------AHL20(2)                <-----------GT1           <---------ARR11(3) ---- -->CBF       ----------->GT1               --------->YAB1--------->YAB1  --------->ANAC55(2)  <----- ----ATHB12   --------->ICU4             --------->YAB1--------->YAB1   <-----------GT1     <--------   aatccaagaagatgaaatgtttatttatttgatttgattactactataacaaattaacaataagaacttgtatttcacatgatttttgctttgttttatt  785000                                                                         --------->ANAC55(2)                                                                         <---------ANAC55(2)                                                                         <------MYB46(1)                                                                         <------MYB83                                                                 <---------DEAR3(1)                                                                 --------->ETT(1)                                                                 <---------DEAR4(1)                                                                 <---------DREB2C(2)                                                                 <---------At1g77200                                                               <-----------HVH21                                                            <---------ANAC55(1)                         --------->ATHB12                   --------->ANAC55(2)   <------ZmHOX2a(1)<-                        <---------YAB1                      <---------ANAC55(2) <---------TOE2(3)  <- >AHL20(2) <----------DOF2                       <---------ARR11(3)     --------->MYB59            <- ------->GT1   ----------->GT1           <---------YAB1     <---------ANAC58   --------->YAB1   <---- ----YAB1 <---------ANAC58            <---------TOE2(3)     <---------ANAC58  --------->ICU4 <------- -AHL20(2)<---------ANAC58 <---------WOX13(1)    --------->ARR11(3) ----------->HVH21  <---------TOE2(3)   agtaaaacaagtgcttttggttatatatgattgatcagataagattatagagatgtttcattacttgtcggtgataggtaatgaggattaagaaatttat  785100  Previous    Next  AGI:  At2g02780.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G14390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41051.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains InterPro domain Leucine-rich repeat, typica Range:  from: 781846    to: 784645    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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