Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <------MYB83                                                                              <---------DEAR3(2)                                                                              <------MYB46(1)                                                                             <---------DEAR3(1)                                                                             --------->MYB46(2)                                                                             --------->MYB55(2)                                                                             <---------DEAR4(1)                                                                             <---------MYB46(3)                                                                      --------->MYB52(1)                                           <---------HSFB2a(2)  --------->LBD16                                           --------->HSFB2a(2) --------->ANAC46               <------                                       <---------At4g35610     --------->ANAC58     ----------->GT1                                       --------->At4g35610     --------->ANAC58  <---------MYB46(3)       <---------ANAC46                <---------ZAT2     ----------->HVH21 <--------P        <------ --ZmHOX2a(2)       <---------ATHB12   --------->ZAT2    <-----------HVH21 <-----------HVH21  <------   cacttcttctcgtgaatagccagtcattttcaaaaaccctaagctcgcgaaaacaatcgggtgacccgaaataaacgggtcggtgattgtgaaattgtgt  760500      ------>ZmHOX2a(1)                            --------->HSFB2a(1)      ========================HOX2a_HOX2a          <---------HSFB2a(1) <---------HSFC1(2)                         ---------->DOF2 --------->HSFB2a(1)                   <-----------------AGL1  <<<<<<<<<TBF1 --------->HSFC1(2)                 --------->ETT(2)     <<<<<<<<<TBF1 <---------ZAT2              <---------ANAC58      --------->HSFC1(2) <---------HSFB2a(1)         <---------ANAC55(1)   <---------HSFC1(2)                              <- --------->At4g35610         <---------ANAC58     <---------KAN4(2)                              <--- <---------At4g35610         <---------ANAC55(2)  --------->ARR14(2)                          <------ ---ANAC58                   <---------ANAC46    <---------GLK1(2)<---------ZAT14       --------->ARR11(3) ---ANAC58             ------>ZmHOX2a(2) --------->At4g35610<<<<<<<<<TBF1               <---------ARR11(3) ---ANAC46       <----------DOF2 <---------CCA1(2)--------->GLK1(2)            <---------GLK1(2) <---   ggaagctcctctaatgcttctttgatccataacgtgtatcgaccgctaaaggaatcttcttcttcttcttcagtgaaaactgattctgaagatttcgtta  760600                                                                                    <-----------RAV1(2)                                                                           <-------MYC3                                                                           ------->MYC3       ----------->GT1     --------->ATHB12                               --------->TGA1a       --------->YAB1      <---------ICU4                                 <---------O2 -----ZmHOX2a(1)          --------->ICU4                                  =========================== ------TOE1(3)            <---------YAB1                <---------ZAT6    --------->O2 ---MYB52(1)            --------->YAB1              <---------ZAT14       <---------TGA1a ------TOE2(3)    <<<<<<<<<TAC1        <<<<<<<<<TBF1--------->ZAT14       ===========================   aggacataatcgtaataaacactcgatgatgattactcttcttcttcttgtcagtctagtgtttagttccaatcccatgtgggttttcaggcgaaattga  760700                                        ----------->GT1                               --------->GLK1(1)           ---------->DOF2  --------->ANAC46  <---------DAG2            --------->ANAC55(1)                 --------->ANAC58      --------->DAG2  <----------DOF2 <---------ARR14(2)  <---------GLK1(2)         --------->ANAC58     ---------->DOF2 ============bZIP_DOF       --------->ANAC58              <------ZmHOX2a(1) --------->ATHB12   <----- ============bZIP_DOF       --------->ANAC58        <---------GLK1(1)      <---------YAB1----------->GT1   gaaactttttcttcaaagtgaattcgaaacacgaaatccagattgtgaaatttgaaatcaggaatcaagaaaatgttttcattgaaaaaaagcgtaactt  760800                                                                                      ----------->GT1                                                   ------------------------>ANAC81  <------------CBF                                              --------->MYB52(1)                --------->ANAC58                                              ---------->DOF2                   <---------ANAC55(2)                                        ------>ZmHOX2a(1)                       --------->ANAC58                                       --------->TOE1(3)                        --------->ANAC55(1)                                       --------->TOE2(3)                        --------->ANAC55(2)                                      ------>ZmHOX2a(2)                         --------->ANAC46                                     <------ZmHOX2a(2)                         <---------LBD16                                    --------->ARR14(2)                         <-------TEIL                                    --------->ARR11(3)                        --------->ARR14(1)                                    <---------ARR11(3)                        --------->CCA1(2)                     ---------->DOF2<---------ARR14(2)                       --------->ARR14(2)                =============================HOX2a_HOX2a                     --------->ARR11(1)                <------ZmHOX2a(1)  <---------GLK1(1)       >>>>>>>>>TBF1     <---------ARR14(2)      --------->CCA1(2)            --------->GLK1(1)    >>>>>>>>>TBF1 *TSS  --------->CCA1(2) -----DOF2      ============================HOX2a_HOX2a ------------------------>ANAC81             -   tggagaagataagacagaggagagaaagagaaaccagagatccttaagtaaaggagaagaagaagaagatgaaatgagagatacggaattgagaaattaa  760900                                                                                                  ---                                                                                           <------MYB83        >>>>>>>>>ARR2                                                                      <------MYB46(1)        <------------CBF                                                               --------->ATHB12      <---------YAB1                       <----------DOF2                --------->MYB52(1)    <----      <---------AHL20(2)           <---------HSFB2a(1)               ---------->ID1 <------ZmHOX2a(1) ----------->CBF                   --------->HSFB2a(1)             <-----------RAV1(1)<---------YAB1   gagtcaatttgattgtaatctctatctgttagaagaaacgttcttctttcttcttgtctgatttttgttttgtggctatcggaagaggacgattggtttt  761000                                                                ------>ZmHOX2a(1)                                           --------->ARR11(3)  --------------->AGL15                                           <---------ARR11(3)  <---------------AGL15                                      --------->AHL20(2)       <---------MYB59                                      <---------AHL20(2)      <-----------------AGL3                                 <---------AHL20(2)           ----------------->AGL3                             <---------RVE1(1)                ----------------->AG           <-------                            <---------AHL20(1)                ----------------->AGL1         --------                            <---------ARR11(3)                <-----------------AGL1         --------           --------->ARR14(2)<---------CCA1(1)      <---------CCA1(1) <------MYB46(1)        <-------   <---------CCA1(2)        --------->AHL20(1)      <---------RVE1(1) ----------->GT1       --------- <---------ANAC58           --------->ARR11(3)     --------->ARR11(3) <------MYB83          <-------- <---------ANAC46         <---------TOE2(3)--------->AHL20(1) ----------------->AGL2    --------->AHL20(2) <---------ANAC58         ----------->ARR10<---------AHL20(1) <-----------------AGL2    <---------AHL20(2) ------->ID1         ----------->GT1--------->YAB1 <---------ARR11(3)--------->MYB59<---------AHL20(2) -------RAV1(1)      <---------MYB46(3)   <---------AHL20(2)  <-----------------AG  --------->AHL20(2)   gtcgcgtttctcagttcttcgagttgttaagatattaaaaataaatattttcagatatttgttttcctaatttggtaaatacaaaatttataaattaaat  761100       <---------AHL20(2) --AHL20(2) ->AHL20(2) ->AHL20(1)                                                                --------->ZAT14 --AHL20(1)                                                                <---------ZAT14 >AHL20(2)          <----------DOF2               <--------P               <---------ZAT18        <-- -AHL20(2)   ---------->DOF2                    <---------ANAC46           --------->ZAT18   --------   tttcaacaatttatctaaagtgatttagggataagtacaaggtttatgtagggtagacacaaattggataagataagtgaacttaatagttcatttagta  761200                                                                     <---------AHL20(1)                                                                 <---------ATHB51                                                                 --------->ICU4                                                                 <---------AHL20(2)                                          --------->TOE2(3)      --------->AHL20(2)                                          --------->YAB1        --------->AHL20(2)                                        --------->AHL20(1)      <---------AHL20(1)  <---------AHL20(2)                                        <---------ARR11(3)  --------->YAB1          <---------YAB1                                        <---------AHL20(1)------>MYB46(1)         --------->YAB1                                        --------->ARR11(3)------>MYB83--------->AHL20(2)                                       --------->CCA1(1)--------->MYB46(3)       --------->AHL20(2)                                     <---------ICU4  ------>NtERF2<---------ICU4 <---------AHL20(2)                                     --------->YAB1  --------->ORA47(1)   <---------AHL20(2)                                     --------->AHL20(2) <---------MYB59   --------->AHL20(2)         ----------->GT1          --------->YAB1     <---------RAP2.6(3) --------->AHL20(2)    <-----------RAV1(1)          <---------YAB1     <---------ETT(1) --------->AHL20(2)             -    --------->ALFIN1           --------->YAB1       --------->DEAR3(1)<---------AHL20(2)          --- -------MYB52(2)    --------->AHL20(2) --------->RVE1(1)--------->AtMYB61<---------AHL20(2)       --- --->GT1 <---------ANAC46     <---------YAB1       --------->DEAR3(2)<---------AHL20(2)    <---------YAB1   actaatgtgttgcgaaaaaaaaaaaaatgtttttgataataatatcttaatttgccgaccaaacaaaataattaatttaaaaatttataatttgtgataa  761300                                     <---------AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)                                    <---------AHL20(1)                                <---------AHL20(2)                            <---------AHL20(2)                                              <--------                            --------->AHL20(2)                                             --------->AHL20(2)                      --------->AHL20(2)                             <---------AHL20(2) <---------AHL20(2)              ----------->GT1   <---------AHL20(1)                  <---------WOX13(1)  <--------ATHB1              <------MYB46(1)   --------->AHL20(1)                <---------AHL20(2)    <---------AHL20(1)              <------MYB83  <---------YAB1                       --------->AHL20(2)     <---------ICU4            <--------P<---------AHL20(2)                         <---------AHL20(2)     --------->AHL20(2)          <---------ZAT6   <---------AHL20(2)                ------>ZmHOX2a(2)          --------->YAB1          <---------REM1(1)--------->AHL20(2)        <---------AHL20(2)              --------->YAB1 -------->AHL20(2)   --------->AHL20(2)             <---------AHL20(2)     ---------->DOF2 <---------AHL20(2) ------>TOE1(3)      <---------AHL20(2)         --------->AHL20(2)--------->ATHB12 <---------YAB1 ------>TOE2(3)----------->GT1  --------->AHL20(2)  --------->AHL20(2)--------->ATHB12 --------->ICU4   cattaaacaatagtgtaggttaaaaaaattttaattaattaatttggacataaatttttttgatctattaattgattaaaagtttattaataattttata  761400  Previous    Next  AGI:  At2g02710.1    Description:  PAC motif-containing protein. Identical to Protein Twin LOV 1 (TLP1) [Arabidopsis Thaliana] (GB:O64511;GB:Q3EC83;GB:Q8W419;GB:Q93VM4); similar to PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE), kinase [Arabidopsis thaliana] (TAIR:AT5G58140.2); similar to PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE), kinase [Arabidopsis thaliana] (TAIR:AT5G58140.1); similar to PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE), kinase [Arabidopsis thaliana] (TAIR:AT5G58140.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO41031.1); contains InterPro domain PAS fold-3 (InterPro:IPR013655); contains InterPro domain PAC motif; (InterPro:IPR001610); contains InterPro dom Range:  from: 758692    to: 760870    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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