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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
YAB1
<---------
YAB1
--------->
YAB1
<---------
ANAC46
---------->
ID1
<---------
AHL20(2)
<---------------
AGL15
<---------
AHL20(1)
--------------->
AGL15
--------->
ARR11(3)
<---------
ICU4
--------->
GLK1(1)
----------->
GT1
<---------
ARR11(3)
--------->
AHL20(2)
--------->
CCA1(2)
--------->
ANAC55(2)
<---------
ARR11(3)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
ANAC55(2)
--------->
AHL20(1)
--------->
TOE2(3)
--------->
ARR11(3)
<-----
-----
ARR11(3)
--------->
AHL20(1)
<----------
DOF2
---------->
DOF2
<--------
---->
ARR11(3)
<---------
AHL20(1)
<---------
ANAC55(2)
------>
ZmHOX2a(1)
<----------
DOF2
tgtcaattcgtaatattgtttcaaaatattttttcgtttataatacataaactttaatttttcctgtaaaagatatcaactgttcttttcatttgtgtta
647600
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
-------->
HAHB4
<---------
AHL20(2)
<---------
ICU4
-------->
ATHB1
<--------
HAHB4
--------->
YAB1
--------->
ATHB51
--------->
ICU4
<---------
ATHB51
<---------
YAB1
--------->
YAB1
<--------
HAHB4
<---------
AHL20(1)
<--------
ATHB1
--------->
AHL20(2)
--------->
ATHB51
<---------
AHL20(2)
<---------
ATHB12
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ATHB51
--------->
AHL20(2)
--------->
ICU4
--------->
AHL20(2)
<---------
CCA1(1)
------->
GAMYB
<---------
AHL20(2)
----------->
GT1
--------->
ARR11(3)
------
GT1
<---------
YAB1
<----------
DOF2
<---------
ANAC55(2)
<---------
RVE1(1)
--------->
DAG2
-
ZAT6
<---------
ICU4
--------->
TOE2(3)
<-------
TEIL
<---------
ARR11(3)
---------->
DOF2
caacccaataattattaaatatttgaaactttagtatttagaaaaaatacataaaactaatagatagatattttattttattttgaaacaaaaagctaga
647700
------>
ZmHOX2a(1)
--------->
TOE1(3)
------>
ZmHOX2a(1)
--------->
TOE2(3)
--------->
ANAC58
------------>
CBF
------>
ZmHOX2a(1)
---------->
DOF2
--------->
ANAC58
<---------
ZAT18
---------->
ID1
<---------------------
WRI1
--------->
REM1(2)
<----------
DOF2
---------
aatggagagtgagagaaaggtccaaaggcacggctaagaaaacaaaaccgtggacaccctgtcctcaatttgacaagtctttgtctcctccttaactctc
647800
------->
GAMYB
<---------
ANAC58
-
--------->
At4g35610
------>
ZmHOX2a(1)
<------
MYB46(1)
<---------
bZIP60(2)
<----------------------
--------->
MYB59
<---------
ANAC58
<------------------------
ANAC81
<---------
YAB1
<---------
At4g35610
------>
ZmHOX2a(1)
<<<<<<<<<
TBF1
<---
---------->
ID1
<------
MYB83
<---------
TGA2(2)
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
>
ZAT6
<----------
DOF2
<---------
AtMYB61
----------->
TGA1
----------------------->
TaNAC69(2)
ttcttctctctctttgtcttattctagtttggtctcaactcccaaaaacgatgacgtttcattcctatatagtcgtcctctcttcttcttctcctcctct
647900
<---------
CCA1(2)
------------>
CBF
<---------
ATHB12
--------->
ANAC58
--------->
TOE2(3)
<xxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
--------->
ANAC46
<---------
ICU4
--------->
AtMYB61
--------->
ANAC58
--------->
YAB1
<---------
ALFIN1
<------------
CBF
--------->
ANAC58
--------->
YAB1
--------->
ANAC46
<---------
At4g35610
--------->
AtLEC2
<---------
DAG2
--
-------->
ZAT6
--------->
ANAC58
---------->
ID1
------>
MYB83
<-----------
GT1
--
--
ANAC81
--------->
ANAC46
<-----------
GT1
------>
MYB46(1)
<----------
DOF2
<----
------
CCA1(2)
--------->
ANAC46
<----------
DOF2
----------->
TBP
--------->
TOE1(3)
<---------
YAB1
tatctctactcaacaccactcaatttcatctctctttttcccttccattgttagtataaaaaccaagcaaacccttaatcacttttcatcatcatatatc
648000
--------->
YAB1
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
ANAC46
<-------
MYC2
<---------
ALFIN1
------->
MYC2
------>
ZmHOX2a(1)
<--
<-------
MYC3
<-----------
ARR10
--------->
ANAC46
-----
------->
MYC3
<---------
ARR14(2)
--------->
ARR14(2)
--------
------->
TOE2(3)
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ICU4
>>>>>>>>>>
WRKY63
------->
TOE1(3)
<---------
CCA1(2)
------------>
CBF
--------->
ANAC46
--------->
ANAC58
-------
GT1
<-------
TEIL
<----------
DOF2
<---------
CCA1(2)
<---------
YAB1
--------->
ANAC58
accttaatccacatgcatacacatatctagtctttttgatat
atggcaattgtatcctccacaacaagcatcattcccatgagtaaccaagtcaacaata
648100
<---------
ICU4
--------->
YAB1
<---------
YAB1
------>
NtERF2
--------->
ARR11(3)
------>
NtERF2
--------->
YAB1
--------->
RAP2.6(2)
--------->
ICU4
<---------
RAP2.6(2)
<---------
ICU4
<---------
DEAR3(1)
--------->
YAB1
--------->
ATERF1(1)
<---------
YAB1
xxxxxxxxxxxxxxxxx>
smallRNA(le3)
--------->
ARR11(3)
-
--------->
YAB1
<---------
ARR11(3)
<
--------->
DAG2
<---------
YAB1
--------->
YAB1
---
--------->
DAG2
--------->
ARR11(3)
<---------
YAB1
----
---------->
DOF2
<---------
ARR11(3)
<---------
At4g35610
<-----------
HVH21
--------
ID1
--------->
YAB1
--------->
At4g35610
<---------
bZIP60(2)
---->
MYB52(1)
--------->
ICU4
<------
NtERF2
------->
TEIL
<---------
YAB1
--------->
WRKY18(1)
->
YAB1
<---------
ATHB12
<---------
REM1(1)
<---------
ARR11(3)
<----
acgaaaaaggtatagaagacaatgatcatagaggcggccaagagagtcatgtccaaaatgaagatgaagctgatgatcatgatcatgacatggtcatgcc
648200
--------->
MYB52(1)
=
------>
MYB46(1)
-
-------->
ARR14(2)
<---------
ARR11(3)
<--
---------
ARR14(2)
>>>>>>>>>
TBF1
--------->
DAG2
---
------>
LBD16
------>
MYB83
---------->
DOF2
------
----->
LBD16
-------->
P
--------->
ARR11(3)
<---------------------
WRI1
<---------
TOE2(3)
======
-----
LBD16
------>
ZmHOX2a(1)
<-----------
GT1
<----------
DOF2
<----------
DOF2
cggatttagattccatcctaccgaagaagaactcatagagttttaccttcgccgaaaagttgaaggcaaacgctttaatgtagaactcatcactttcctc
648300
<---------
HSFB2a(1)
=====================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<---------
YAB1
----------->
GT1
--------->
ARR11(3)
<---------
ARR11(3)
<---------
YAB1
--------->
LBD16
---------->
ID1
--------->
HSFB2a(1)
<----------
DOF2
--------->
HSFB2a(1)
<----------
===================================
HOX2a_HOX2a
--------->
YAB1
----->
ZmHOX2a(2)
<---------
HSFB2a(1)
--------->
ARR11(3)
-------
ARR11(3)
<---------
HSFC1(2)
<---------
ARR11(3)
------>
ARR11(3)
--------->
HSFC1(2)
<---------
GLK1(1)
>
ZmHOX2a(1)
--------->
YAB1
------>
ZmHOX2a(1)
--------->
GLK1(1)
<
=====================
HOX2a_HOX2a
<-------
TEIL
--------->
At4g35610
--------->
TOE2(3)
gatctttatcgctatgatccttgggaacttcctg
gtaaatatacattcacataaacacacataaatcatctcaaactatttggaaatcttaatttctatt
648400
========================
------>
ZmHOX2a(1)
------>
MYB83
<----------
DOF2
-------->
P
------>
ZmHOX2a(2)
------>
MYB46(1)
<------
ZmHOX2a(2)
--------->
MYB55(1)
--------->
AGP1
<---------
MYB59
--------->
ARR14(3)
<---------
MYB46(2)
<---------
ARR14(3)
------->
TEIL
<---------
ARR11(3)
<---------------
AtSPL8
--------->
ARR14(2)
--------------->
AtSPL8
-
<---------
ARR14(2)
--------->
TOE2(3)
--------------->
AGL15
<
--------->
ARR11(3)
<----------
DOF2
<-----------
GT1
<---------
MYB111(2)
<----
-
GT1
----------->
ARR10
<---------
DAG2
<-----------
GT1
<---------
MYB111(1)
-----
---------
TOE2(2)
<-----------
GT1
<----------
DOF2
<---------------
AtSPL3
<-----------
GT1
catatgttaagatctttcttctctcttatcactttctctctctatttctttttttttaacctatatatgtacctacctccttatgaagtattactatgtc
648500
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AGI:
At2g02450.1
Description:
ANAC034/ANAC035 (Arabidopsis NAC domain containing protein 34, Arabidopsis NAC domain containing protein 35); transcription factor. similar to ANAC036 (Arabidopsis NAC domain containing protein 36), transcription factor [Arabidopsis thaliana] (TAIR:AT2G17040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46935.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441)
Range:
from: 648043
to: 650813
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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