Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ATHB12                                            -------->HAHB4                             --------------->AGL15                         --------->GLK1(1) <---------YAB1                         <---------GLK1(1) --------->ICU4 <----------DOF2    <----------DOF2   --------->YAB1                      --------->ANAC46 <---------DAG2--------->ANAC58    --------->YAB1                  <---------ICU4 -----ALFIN1   --------->ANAC58 --------->YAB1          <---------At4g35610            <-------TEIL<- ---ALFIN1    --------->SPL7----------------->AG        --------->At4g35610           --------->CCA1(2)   tcgctttctctaaccatacgctctttgatttccaaaataatcaaaatgattcaatagcagcaaacttcaaaattacaccaaaatagagatacaaattgca  620400                                      --------->AHL20(2)                                   --------->YAB1                              --------->ICU4                              <---------YAB1                                    <-------GAMYB                            --------->YAB1                                     ======================                       <------ZmHOX2a(2)           <----------DOF2             ------>ZmHOX2a(2)                      <---------ARR11(3)           <---------DAG2            <---------ARR11(3)            --------->At4g35610<---------ICU4     --------------------->WRI1 --------->ARR14(2)  ---------->DOF2     --------->ARR11(3)          <---------DAG2             <---------ARR14(2)     < ---------DOF2       <---------At4g35610    <-----------GT1                 <------ZmHOX2a(1)       <   actttaaggcgatgagatgagacagatcattcattattcataaattttgctacctttttgtcatcgtcgaatagaacaggatcgttacagagagagaaat  620500                                                               <---------HSFB2a(1)                                                               <---------HSFC1(2)                                                               --------->HSFB2a(1)         --------->DEAR3(1)                                                               --------->HSFC1(2)        <---------At5g28300                                                           --------->ANAC58            <---------ZAT14                                                         <------NtERF2               <---------bZIP60(1)                                                      <---------LBD16                --------->bZIP60(1)                                                     --------->LBD16           --------->ARR11(3)     ------>ZmHOX2a(1)                               ------>NtERF2             <---------ARR11(3) ===========HOX2a_HOX2a                      --------->YAB1--------->ANAC58   --------->CCA1(1) ---------At4g35610                         <-------TEIL--------->LBD16       --------->RVE1(1)<----- ---------GLK1(1)                <------ZmHOX2a(1)  --------->ANAC46      --------->AHL20(2)<--------   agagctccttcttcgatgagaaaactcgcgatggaggaatcagagattcataatccgccggaagaaacttctcccatataatatctgacttcaccgtcga  620600                                     <---------ANAC58                                     <---------ANAC46                              --------->ANAC46                              --------->ANAC58                              --------->ANAC58                             ------->TEIL                           <---------SPL7                                      --------->LBD16                          --------->ANAC58                                    <---------HSFB2a(2)                          --------->ANAC58                                    --------->HSFB2a(2)                       --------->DEAR3(1)                                    <---------LBD16                       ----------->HVH21                                 --------->HSFB2a(1)     <---                      --------->At4g35610 --------->ARR14(2)         <-------TEIL<---------ARR14(2)                   <---------At4g35610    <---------ARR14(2)      --------->GLK1(1)        --------->MYB52(1)                   --------->ZAT2    <---------ANAC58             --------->At4g35610  ------->TEIL ----DEAR3(2)      --------->At4g35610--------->LBD16   --------->GLK1(2)<---------HSFB2a(1)--------- ---HVH21          <---------ZAT2------->TEIL    ---------->DOF2<------ZmHOX2a(1)--------->ARR14(2)   ttcaaacgttttcgaaaccgtagcagcgacgcacgcatcgcgtggatttgtaaaagagattatgtaggagatgcaatcttccggaaatgaatcgaacgga  620700                                                                            <---------ZAT6                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                   *TSS     ----------->GT1                        <-----------GT1                           --------->ANAC58                     <---------ARR14(2)       <---------ARR14(2)  --------->ANAC58                 <-             --------->ZAT6                   ------->TEIL        --------->ANAC46                 -- ------ATERF1(1)     --------->ARR14(2)       --------->ARR14(2) --------->LBD16  <---------ARR11(3)- >SPL7     <-----------GT1                   <---------CCA1(2)   <---------LBD16  --------->ARR11(3)<   gacgactccgatttaactctgcgttttctccccatcgatcgacgcttgtatcttcgtcttcgtcttccacggaagctagtgtaaaatctcaagtcgttct  620800        ---------->DOF2                                                                       -------      --------->ANAC46     <---------ANAC55(2)                                         ------->MYC3--    <-----------GT1        <---------YAB1                                              <-------MYC3-- --------AHL20(2)     <---------ICU4                                                  --------->ANAC46 ------->AHL20(2)     <------ZmHOX2a(1)                                               --------->O2 -- -------->AHL20(2)   --------->ICU4                    <---------TOE2(3)              --------->ANAC58 ---------AHL20(2)  <---------TOE2(3)              <------------CBF  --------->ATHB12 --------->ANAC58   attaatttacgaaagtacccctaaggattacgaaaatttcaagtcgttctacatattgacgaaaatagccctgatttgtgaacaatccacgcgtctactt  620900                                               --------->ARR14(2)                                               <---------ARR14(2)                                            <---------TOE1(3)                                       <---------MYB46(3)                                       <------MYB46(1)                                       --------->MYB52(2)                                       <------MYB83                                   --------->ATHB12                                               <--                                   <---------MYB46(3)                                          ======                                  <-------TEIL<------ZmHOX2a(1)                           --------->YAB1                                --------->ARR14(2) <------MYB83                           --------->AHL20(2)                                <---------ARR14(2) <------MYB46(1)                       <---------ATHB12  >>>>>>>>>>>>>>>>>LFY  <---------ICU4<---------TOE1(2)                                --------->WOX13(1) -->ANAC46              --------->ATHB12    <---------TOE2(3)                    --------->MYB46(3) - ------->ANAC58         --------->ATHB51<-------GAMYB                        <---------MYB52(2)------ ------->ANAC58        --------->ICU4 <---------TOE2(2)       --------->CCA1(1)  <---------MYB52(2)<- ------->ANAC46        <---------YAB1<---------MYB52(1)       --------->RVE1(1)--------->MYB52(1)----   cacgctccattgtttttttttggtcattattgtggattcgttggttaaggatttggttttgaaaatatccaaattccaaactaacaaaccaattaaaaaa  621000       --------->MYB59      <-----------RAV1(2)    <-----------HVH21   --------->ANAC58                   <---------YAB1                                   ----------->GT1   --------->TGA1a                 <---------KAN4(2)                                  --------->DAG2   --------->ANAC58           --------->ALFIN1                                    --------->LBD16   =================================MYC_MYB                         ----------->HVH21---------->DOF2 --------ID1                ------->GAMYB                  --------->YAB1        --------->HSFB2a(2) ============bZIP_DOF    --------->MYB52(1)                --------->AHL20(2)    <---------HSFB2a(2) -------->WRKY18(1)     <---------WRKY12                  <---------YAB1         <---------HSFC1(1)-- ---->DOF2              <---------WRKY38(1)            <---------YAB1           ----------------->AGL1 ----------HVH21       <------ZmHOX2a(2)              --------->AHL20(2)   <---------MYB52(1)      <- ----->DAG2        <---------TOE2(3)  <---------AHL20(2)--------->YAB1   ----------->GT1  ---------->DOF2   aggtcaagtcaggtatgcattatggatcaacggtgggaatattatttgttttgaatttttataatatagtctgactcgttattccagaaaagtaaagctt  621100              ----------->GT1            ---------->DOF2          --------->ANAC58                             --------->GLK1(2)          --------->ANAC46                            *TSS          --------->ANAC58                          ------------>CBF       <---------ARR14(2)                          --------->ANAC58       --------->ARR14(2)                          --------->ANAC58   <---------TOE2(3)                           --------->ANAC58                     <----------ID1  --------->MYB52(1)                           --------->ANAC58             <---------TOE2(3)       -  <---------DOF5.7(2)  ----------->GT1       ---------->DOF2               ---------->DOF2          - ------->At4g35610   <------------CBF    <---------ANAC55(2)              <---------AHL20(2)        - --------At4g35610 <---------AHL20(2)  --------->AHL20(2)                 --------->AHL20(2) --------   aagctaacgaatacgaaagaaaaaattgataaaaaatgaaattaagtaaaagcaaacaatctatttttcatttgaattaaagaaaaaaaacaaacacaaa  621200                                                                     --------------------->WRI1                                                                   -------->P                                                                   --------->ANAC58                                                                  ------->GAMYB                                                                 <---------ALFIN1                                                             ------>NtERF2                                                             <------NtERF2                                                             --------->LBD16                                                            --------->RAP2.3(3)                                                            --------->RAP2.3(2)                                                            --------->ANAC46                                                            --------->DEAR3(1)                                                            --------->RRTF1(2)                                                            --------->ANAC58                                                            --------->RAP2.6(2)                                                            --------->ANAC58                                                            --------->RRTF1(3)                                                           --------->RAP2.3(1)                                                           --------->RRTF1(1)                                                          ------>NtERF2                                                          --------->At4g35610                                                      --------->ARR14(2)                                                      <---------ARR14(2)                                                     --------->GLK1(1)                       <-------                                                    ----------->ARR10------->GAMYB           --------                                                  --------->TOE2(3)--------->ANAC58         ---------                                                 --------->ANAC58<---------MYB55(2)    <---------SPL7                                               --------->MYB52(1)<---------MYB52(2)   <---------ANAC58                                             <---------MYB52(2)  <---------MYB111(1)  <---------ANAC58                                 --------->ANAC46--------->ANAC58--------->MYB46(3)   <---------ANAC46                               --------->ZAT6--------->MYB46(3)----------->RAV1(1)   <------NtERF2                             =====================RAV<---------GLK1(1)             <---------DEAR3(1) -------->ANAC58             ----------->RAV1(1) ----------->GT1 <---------MYB111(2)------>NtERF2 -------->ANAC46     --------->ANAC58  --------->TOE1(3)  <---------ATERF1(1)     --------->SPL7   -- -------->ANAC58     --------->ANAC58  --------->TOE2(3)  --------->LBD16       ----------->HVH21 --- ->ANAC46        --------->GLK1(2)    ----------->RAV1(2)--------->ANAC46    <-----------GT1---------   acacgcttctcttgttgagaagctagcaaaacaacactaaacctgaaacaaacgtaaatccgccgcaacaacccagttttttccgacggcgtacaagctt  621300  Previous    Next  AGI:  At2g02360.1    Description:  ATPP2-B10 (Phloem protein 2-B10); carbohydrate binding. Identical to F-box protein PP2-B10 (PP2B10) [Arabidopsis Thaliana] (GB:Q9ZVQ6); similar to ATPP2-B8 (Phloem protein 2-B8), carbohydrate binding [Arabidopsis thaliana] (TAIR:AT2G02340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17188.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 619405    to: 620767    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g02370.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22255.1); contains InterPro domain SNARE associated Golgi protein (InterPro:IPR015414) Range:  from: 621154    to: 623343    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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