Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------ICU4                                             --------->ATHB51                                             --------->ATHB12                                          <---------ICU4<---------ARR11(3)                                       <---------bZIP60(1)                                       --------->bZIP60(1)                                 ---------->DOF2        --------->ARR11(3)                              --------->TOE2(3)     ---------->DOF2                          --------->AHL20(2)<---------YAB1                          <---------AHL20(2)--------->ICU4                <---------YAB1 --------->AHL20(2)   ctaaaaactatagcacaaaatttcttatttaaacttaaatcacatcattattgtcaaagttctctaactaaatttgatgattcaaaaaaaaaaaaatccc  616900                 <----------DOF2                <---------DAG2             <-----------GT1              <---------ARR14(2)                    --------->YAB1 <-----           --------->CCA1(2)              <---------GLK1(2)                  <---------HSFB2a(2)          --------->ARR11(3)      --------->YAB1--------->ETT(1)             --------->HSFB2a(2)          <---------ARR11(3)--------->TOE2(3)  ---------->ID1          ------>ZmHOX2a(1)    <--------   <---------TOE2(3) <-----------GT1      --------->ARR14(2)      <---------GLK1(1) --------->GLK1(2)  ---------->DOF2<---------DAG2--------->WOX13(1)  ---------->DOF2<---------At4g35610    ---------->DOF2   atattaaagatagatatacctttttgccatcgtcaattagaacagatttgtcgcaaagagcgaaatagagctccttcttcgataagaatttgaaagctcg  617000                                                                  --------->DEAR3(1)                                                               --------->DEAR3(1)                                                              --------->MYB46(3)                                                              --------->DEAR3(2)                                                              -------->ZAP1                                                            <---------WRKY18(1)                                                           --------->WRKY12                                                           --------->WRKY38(1)                                                           ----------->HVH21                                                         <---------ANAC58                          <-                                                         <---------ANAC58                         ---                                  <-----------GT1        <---------TGA1a                          ---                             <------NtERF2         --------->ARR11(3)                           <----                           <---------ANAC46        <-----------ARR10                          ------- ----------->GT1 --------->YAB1<---------KAN4(2)   <---------ARR11(3)     <---------TOE2(3)   ------- ----LBD16      <-------TEIL--------->LBD16        --------->ARR14(2)--------->ANAC58     --------->ANAC58 -ZAT2--------->GLK1(1)   <---------LBD16          <---------ARR14(2)--------->ANAC58     --------->ANAC58   ggattgagaaatcaaagattcatactctggcggaataaacttctcccatacaatatctgacttgaccgccgaagcaaaggttttcgaaaccgaagcaagg  617100     ------->TEIL  --------->ANAC58                                                                <----------DOF2  --------->ANAC46                                     --------->ANAC58       <---------MYB52(1)  --------->ANAC58                                     --------->ANAC58       ----------->HVH21 ------->TEIL                                        <--------P              --------->LBD16 --------SPL7                                      --------->LBD16           --------->At5g28300 ------>ANAC58                                    <---------HSFB2a(2)     ------->GAMYB      -------- ------>ANAC58       ---------->DOF2       <---------GLK1(2)             --------->DEAR3(1)  <------- --ZmHOX2a(1)  <---------ANAC46   <---------WOX13(1)<---------MYB52(1)  >>>>>>>>>MYB2        -------- -->ANAC58     <---------ANAC58 --------->ATHB12  --------->HSFB2a(2)<---------At4g35610     <------- -->ANAC58     <---------ANAC58<---------YAB1    <---------LBD16     --------->At4g35610--------->ETT(1)   acgcacgcatcttgagggcttgtgaaagagactatgattgagacacattcttccggtaagtcatccaactcagcaacgccgtgacttttgtcggaagctg  617200                                                                                             <-------                                                                                             <------MYB46(1)                                                                                             --------                                                                                             <------MYB83                                                                                            <--------                                                                                            <-------- ->At4g35610                                          ------->TEIL                         <---------MYB52(1) --ZAT2                            --------->ANAC46--------->ANAC58            ----------->HVH21 ->ZAT2                          <-----------GT1   --------->AtLEC2  --------->ICU4      <---------MYB46(3) --At4g35610          --------------->AtSPL8       --------->ANAC58  <---------YAB1  <------ZmHOX2a(1)   agagtctaagagtcttcttaactcgttgtacaattttacgaaaatgctcatgcatgcaccttgttttggtcattatcgtctctcacaggagtcgttggtt  617300                                                                  <----------DOF2                                                      --------->ANAC58   <----------DOF2                        --------->YAB1  --------->MYB59   <---------DAG2           ------->GAMYB --------->AHL20(2)  --------->ETT(2) --MYB46(3)                --------->MYB46(3)         <---------ANAC55(2) ->MYB52(2)                <---------MYB52(2)         --------->ANAC58                      --------- -TOE1(2)                --------->MYB52(1)  ---------->DOF2  <---------ETT(2)<-----------GT1    ---- -TOE2(2)     ----------->GT1  --------->MYB46(3)     --------->ANAC55(2)   --------->AHL20(2)   ----   tcggacttttttggtttggaaaaattctaacgaacaaacccaaattataaagagtcaagtaaggtcgactttgtggaattaaaccgtgttagagtggaat  617400                         --------->AHL20(2)                         --------->YAB1                        <---------YAB1                       --------->AHL20(1)                       <---------AHL20(2)                       --------->AHL20(2)                       <---------AHL20(1)                                                 <---------ANAC55(2)                      --------->YAB1                                                 --------->YAB1                  <---------YAB1                                                   <---------ARR11(3)               --------->ICU4                             <---------HSFB2a(2)      --------->ARR11(3)            <---------MYB52(1)                            --------->HSFB2a(2)     <---------GLK1(1)           <-----------HVH21                        <---------ICU4                --------->GLK1(1)  <-----------HVH21  <---------YAB1               ------------>CBF               --------->ARR11(3) -->GT1   --------->ANAC46                   --------->ANAC58                    <---------ARR11(3) ----->AHL20(2)<---------YAB1                --------->ANAC58                   <------ZmHOX2a(1) ----->YAB1<-----------TGA1               <---------MYB52(1)                ---------->DOF2    ------   aatatgtcattcccgtcattcttattataatatagtcttgactcgttacgctaacaattactagaaaaataagacttaaaaaggatatcatcacataaac  617500                                                                                           --------->ATERF1(1)                                                                                           ------>NtERF2                                                                                          ------>NtERF2                                                                                          <---------RAP2.3(1)                                                                                          <---------ERF1                                                                                          --------->RAP2.6(2)                                                                                          <---------ATERF1(1)                                                                                          <---------DEAR4(2)                                                                                         --------->DEAR3(1)                                                                                         <---------DEAR3(1)                                                                                         <---------RAP2.3(3)                                                                                         <---------RAP2.6(2)                                                                                         <---------RAP2.3(2)                                                  ------>ZmHOX2a(1)                    <---------RAP2.3(1)                                                  =================================HOX2a_HOX2a                                                 --------->TOE2(3)            ---------->DOF2                                           --------->ARR14(2)               <------ZmHOX2a(2)                                <----------DOF2------>ZmHOX2a(1)           <-----------ARR10                               <---------DAG2  ====================================HOX2a_HOX2a                        ------>MYB46(1)   --------->GLK1(1)              --------->LBD16--------->ATERF1(1)          <-------TEIL  ------>MYB83 <---------LBD16                    --------->RAP2.6(2)<------NtERF2       --------->YAB1  <---------CCA1(2)  <---------GLK1(1)            <---------LBD16--------->ANAC46 ------>CBF   <-------TEIL  <-----------GT1<---------ARR14(2)   --------->At4g35610  --------->SPL7   aatttagaatgatacatccattcacctatcttacctttcttcgggtttcctccttagaaactactcatcggaagccggatcaaagcatacggcggccctg  617600                  <---------ALFIN1                  --------->AtMYB61                 --------->MYB46(3)              ------>ZmHOX2a(2)              --------->MYB46(3)             <------ZmHOX2a(2)            <---------TCP20            <---------ARR14(2)            --------->ARR14(2)         <---------ANAC55(2)         --------->ANAC58         --------->ANAC55(2)         --------->ANAC58                                  --------->AHL20(2) --------->ANAC58         --------->ANAC55(1)                <---------GLK1(1) --------->AHL20(2)                 ----         --------->ANAC46                   --------->GLK1(1) <---------AHL20(1)                 ----       --------->MYB52(1)      --------->At4g35610  <---------ARR14(2)        --------->ANAC58  <----      <---------SPL7--------->ANAC46       ---------->TaMYB80 --------->AHL20(1)               <-----     --------->AtMYB61         <---------At4g35610  --------->ARR14(2)      ------>ZmHOX2a(1)  <-----   gctaagaccatacggatccaccactctaccttcagcttataaggggacatcccaaatccaaaaatataatccaatttcctaagcactaagtaagtttgag  617700                                         ------->TEIL                                         <---------ARR14(2)                             --------->ANAC46                                         --------->ARR14(2)                          --------->TOE1(2)                                        <---------CCA1(2)                            --------->TOE2(2)                                    <---------ANAC58                               ------->TEIL ------->TGA1            <---------ARR14(2)    --------->ANAC58         ------>ZmHOX2a(1) ------->HVH21           --------->ARR14(2)    --------->ANAC58   --------->AtMYB61<---------ARR11(1) -----WOX13(1)          <------ZmHOX2a(1)--------->GLK1(2)      -------->P         <---------ARR14(2) ----ANAC58    --------->At4g35610  <---------ANAC46            ------->TEIL       --------->ARR14(2) ----ANAC58    <---------At4g35610  <---------ANAC58  --------------->AtSPL8      <---------ARR14(1)   tgacgatttttggggacagaagacgaggattcaacttgtcgtgaatctgaagccaatttgtacatcaacctctcctactctttcgaatctacgaaaaaca  617800  Previous    Next  AGI:  At2g02340.1    Description:  ATPP2-B8 (Phloem protein 2-B8); carbohydrate binding. Identical to Putative F-box protein PP2-B8 (PP2B8) [Arabidopsis Thaliana] (GB:Q9ZVQ8); similar to ATPP2-B7 (Phloem protein 2-B7), carbohydrate binding [Arabidopsis thaliana] (TAIR:AT2G02320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17188.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 616087    to: 617273    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g02350.1    Description:  SKIP3 (SKP1 INTERACTING PARTNER 3); carbohydrate binding. Identical to F-box protein SKIP3 (SKIP3) [Arabidopsis Thaliana] (GB:Q9FV02;GB:Q9ZVQ7); similar to ATPP2-B10 (Phloem protein 2-B10), carbohydrate binding [Arabidopsis thaliana] (TAIR:AT2G02360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17188.1) Range:  from: 617799    to: 619090    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version