Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------AHL20(2)                                                                                 <--------HAHB4                                                                                 --------->ATHB12 -------->AHL20(2)                                                               --------->YAB1 ------>AHL20(1)                                                                 <---------ICU4 ------>AHL20(2)                           --------->AHL20(2)                   --------->ICU4 ----->YAB1                    <---------ZAT6                         <---------ICU4--------->AHL20(2) -->YAB1                    --------------->AGL15                 --------->ANAC46--------->TOE2(3) ->AHL20(2)                 <---------------AGL15    --------------->AtSPL8     <---------ATHB12   aataatataagagattaagacccaatacaactagttttagtagaatgaaatagacttagtacaattacaccaaaattgctccatcattaaataagtttat  607400                                                            <------ZmHOX2a(1)                                                           ----------->GT1                                                          <---------TOE2(3)                                                          <---------TOE1(3)                                                    <---------------AGL15                                                    --------------->AGL15                                                   <-----------------AGL3                             <---------ARR14(2)    <-----------------AG           >>>>>>>>>>>>>>>>>LFY                             --------->ARR14(2)    ==================================================               <---------ICU4--------->GLK1(2)     <-----------------AGL2        <-----------GT1  ---              --------->ICU4<---------GLK1(2)     <---------At5g28300    <-----------GT1    <--------      <-----------RAV1(1)--------->YAB1         <---------ATHB12   --------->AHL20(2)    <---------TOE2(3)   tcaaatccctgttgccataattctctaacagaatccatacataaattccaattactgtataaggatatataaaatataccattttgccattgtggtttgg  607500                                                                                  ----------->GT1                                                                                  <---------MYB46(3)                                                                                  --------->MYB55(2)                                                                                 <---------AtMYB61                                                                                 --------->ALFIN1                                                                                <-------GAMYB                                                                                <------NtERF2                                                                              <---------DREB2C(2)                                                                             <---------ABI4(1)     ------>ZmHOX2a(2)                                                      --------->LBD16     --------->ANAC58                                                   --------->GLK1(2)     --------->ANAC58                                               --------->ANAC55(2)  <---------HSFB2a(1)    <------ZmHOX2a(2)                                               <---------ANAC55(2)  --------->HSFC1(2)   <---------ARR14(2)                                              <-------TEIL<---------MYB46(3)   --------->ARR14(2)          <----------DOF2                    --------->CCA1(2)      --------->HSFB2a(1) ==============================================MADS_MADS   <---------At4g35610--------->ALFIN1 ------>MYB52(1)               --------------->AGL15       --------->At4g35610<---------DEAR3(1)    - -ANAC46---------->DOF2<---------GLK1(1)              <---------HSFB2a(2) <---------LBD16<---------HSFC1(2)   aaacggatcgcaaagagcgaaatagagttccttctttgaagagaaaactcgcgattttggaagcagagatacataatccggcggtggtagaaacttctcc  607600                                                                 --------->ALFIN1                                                                --------->LBD16                                                               <---------O2                                                               <---------ANAC46       --------->YAB1          <----------DOF2                 --------->O2                      ----     --------->MYB52(1)        <---------DAG2       <---------MYB52(2)                   --------->YAB1 --------->ANAC58         ---------->DOF2          --------->ANAC58                     <---------YAB1 --------->ANAC46     --------->ANAC58             --------->ANAC58               <---------ARR11(3) --------->ANAC58     --------->ANAC58    ---------->DOF2    --------->SPL7       --------->ARR11(3) -------->SPL7        --------->ANAC46   --------->AtMYB61 <-----------HVH21  ---------->DOF2    ----   catacgctatcggaattgaactgcaagccaaagcttttcgaaaccaaagcagcaaggaacgcgtcccgtggagtacttgtaaaagagcttatgatagcta  607700                                                                     --------->TOE2(3)                                                                     ----------->RAV1(1)                                                                     ------->GAMYB                                                                    --------->MYB46(3)                                                                   -------->P                                                                  ------->GAMYB                                                                 <---------MYB55(2)                                                                 --------->MYB46(3)                                                                 <---------MYB111(1)                                                         --------->HSFB2a(1)                                                         <---------HSFB2a(1)                                                        <---------ARR14(2)            --------->ANAC58                            --------->GLK1(2)            --------->ANAC58                            <-----------ARR10            <----------DOF2  <---------ATHB12                         --------->AHL20(2)    <---------MYB111(2)<---------DAG2 <- ----->ANAC58                           --------->YAB1  --------->ARR14(2)        ------>NtERF2    <- ----->ANAC58       ---------->DOF2 --------->ATHB12   <---------GLK1(2)    --------->GLK1(2)    <---   agcaatcgtctggcaagtcatcgaaagatgccgaagaaccattgataaattcagtgagaatctcccaacaaccacaaaattctgcgcctttccctcttgt  607800                                                         --------->ANAC58   ------->GAMYB                                         --------->ANAC46  --------->ANAC58                                  <----------DOF2   <---------At4g35610  --------->ANAC58                          --------->ZAT2            --------->At4g35610  --------->ANAC46                          <---------ZAT2            --------->ZAT2 --------WRKY38(1)                    *TSS  <---------At4g35610       <---------ZAT2       ---------- --------WRKY12         <---------MYB52(1)  --------->At4g35610     <-----------RAV1(2)---------->DOF2 --------HVH21 ---------->ID1        ------>ZmHOX2a(1)   --------->ANAC58--------->At4g35610   gtcaacgccatgtttttggcccattcgatagttttcttcctctgcaagctgagactttcaagaaatagtctcagctgctaaatgttttaaaaagaaagac  607900                                                      ------->MYC3                                                      <-------MYC2                                                      <-------MYC3                       --------->ANAC46               ------->MYC2                      <---------TOE1(3)           <---------ZAT18                      <---------TOE2(3)           <---------ZAT14                     <---------DOF5.7(2)          --------->ZAT18                   --------->DOF5.7(2)    <-----------HVH21             <---------ALFIN1             <-----------TGA1            <---------ZAT18              <---------ANAC46                                          --            --------->ZAT18              <---------ANAC58                                   ---------          <---------SPL7                 <---------ANAC58                                 <---------MYB52(2)         <---------ANAC46            <----------DOF2------->TEIL                          <---------MYB111(1)         <---------ANAC58       --------->YAB1  --------->ZAT14                           <---------MYB46(2) >DOF2   <---------ANAC58      <---------YAB1   <---------ZAT18<-------TEIL      <---------KAN4(2)<--   tcgttgtaatgtcgtccactcgttaacgaaactatcattctttgcgtcagtgtgcacgtttgatgttcgttttggtatttggaaatattctaactaacaa  608000                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                     <---------ARR11(3)                                   <---------YAB1     --------->AHL20(1)                             <---------AHL20(2)      <---------AHL20(2)        <---------AHL20(2)   --------->AHL20(2)      --------->AHL20(2)        --------->AHL20(2)   <---------YAB1       --------->AHL20(2)   <---------RAP2.6(3)  --------- ----------->GT1       ----------->GT1           --------->AHL20(2)    ------>NtERF2        <-------- ------->YAB1       <---------GLK1(2)--------->ARR11(3)          ---------->DOF2            <-------- >MYB52(1)         <---------At4g35610           <---------AHL20(2)   --------->DEAR3(1)    --------- -------ATHB12     --------->At4g35610<------ZmHOX2a(2)    <-----------GT1                 --------->AHL20(2)   atcatgttatataatttagtcagattagtatataattaagatcatcgtgatataaattaattatctatatagccgacttctcatgtctatctaataaatt  608100         <---------------AtSPL8         ----------------------->TaNAC69(2)        ---------->DOF2                 <----------DOF2     --------->YAB1               <-------TEIL<----------DOF2                         ---------------    <---------YAB1              --------->TOE1(2)  <-----------GT1                    <-------------- >AHL20(2)                    <---------------AtSPL8                               <-----------GT1 -AHL20(2)                    ------->TEIL    <---------DAG2             --------->TOE2(3)   -------- -AHL20(1)                    --------------->AtSPL8           <---------ZAT18 <----------DOF2    --- >AHL20(1)   <-------TEIL     --------------->AtSPL3    ------->TEIL     --------->TOE1(3) ----------   cgatctataataaagtccataaatgatatatgaacgtacaaactttgacttttttacgaattttgttcacttgaacattaacttttaacaaaataaagaa  608200                                                                                      <---------AHL20(2)            <---------ICU4                                                            --------->AHL20(2)           --------->ICU4          --------->YAB1                             <----------ID1    <---- >AGL15    <---------YAB1       <---------ICU4            <-----------GT1 --------->CCA1(2)     ----- -AGL15  --------->YAB1        --------->ICU4          <---------ZAT6  --------->ANAC58         <---- --->GT1 <---------ICU4        <---------YAB1          ----------->GT1 --------->ANAC58         <---- ------->DOF2                --------->YAB1   <---------ARR14(2)       --------->ANAC46         <---- >DOF2 --------->GLK1(2)    <---------YAB1    --------->ARR14(2)      --------->LBD16--------->AHL20(2)   aaaagagagaatcatgatgaacaattgaacatcataatcaaaaacccaaatccagtattgttacaaggtttccacgatatacaacaaatttataacttac  608300  Previous    Next  AGI:  At2g02300.1    Description:  ATPP2-B5 (Phloem protein 2-B5); carbohydrate binding. Identical to F-box protein PP2-B5 (PP2B5) [Arabidopsis Thaliana] (GB:Q9ZVR1); similar to ATPP2-B6 (Phloem protein 2-B6), carbohydrate binding [Arabidopsis thaliana] (TAIR:AT2G02310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17185.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 606181    to: 607838    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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