Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(2)                              --------->AHL20(2)                            --------->AHL20(2)                            <---------AHL20(2)                          --------->AHL20(2)                          <---------AHL20(2)                                                   <-----                        --------->AHL20(2)                                                    -------                        <---------AHL20(2)                                              ------>MYB46(1)                    --------->AHL20(2)                                                  ------>MYB83                    <---------AHL20(2)  <---------AHL20(2)                         <-----------GT1                   <---------AHL20(2)   --------->AHL20(2)                     <---------RVE1(1)               --------->AHL20(2)  <---------AHL20(1)                         --------->ARR11(3)               <---------AHL20(2)  --------->AHL20(1)                         <---------ARR11(3)    -              <---------AHL20(1)  <---------AHL20(2)                    --------->DAG2<---------MYB59              --------->AHL20(2)--------->AHL20(2)                     ---------->DOF2<---------MYB111(1)              <---------AHL20(2)<---------AHL20(2)           <---------AHL20(2)<---------CCA1(1) <---   aattcacaaatatcaatttaatttatatatatatatatatattaaaaaaacaatatgagttatatatatgtcataaagtagatatttacctactaatttt  601000                             <---------AHL20(2)                             --------->AHL20(2)                           <---------AHL20(2)                           --------->AHL20(2)                         --------->AHL20(2)                         <---------AHL20(2)                       <---------AHL20(2)                       --------->AHL20(2)                     --------->AHL20(2)                     <---------AHL20(2)                   --------->AHL20(2)                                       <---------AHL20(2)                  --------->AHL20(1)           --------->YAB1               --------->AHL20(1)      -              <---------AHL20(2)            --------->YAB1                  --------->AHL20(2)     -- ----AHL20(2)--------->AHL20(2)  <---------AHL20(2)                    --------->AHL20(2)        ---- -->AHL20(2) --------->AHL20(1)<---------AHL20(2)              --------->AHL20(2)            <------- -------->TOE2(3) <---------AHL20(1)       <---------YAB1      <---------AHL20(2)        ---------->DOF2 --------GT1 <---------AHL20(2)--------->AHL20(2)   --------->ICU4 ----------->GT1 ---------->DOF2---   atccataaaactaaatttaatatatatatatatatatatatgaaaattatagtaatgttttttaaaaaaatgaaaaaataaaatgaaaagaaaaagagaa  601100                                                                            <---------AHL20(2)                                                                            <---------YAB1                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                         --------->AHL20(1)                                                                         <---------AHL20(1)                                                                      --------->AHL20(2)                                                               --------->AHL20(1)                                                               --------->AHL20(2)       <---------ARR11(3)                                      <---------AHL20(2)   ---------->DOF2                                            <---------AHL20(2) ---------->GT1                                               --------->AHL20(2)                   -- ------->DAG2                                                <---------AHL20(1)                   --- ------>DOF2            <---------AHL20(2)  <---------------AtSPL8<---------AHL20(2)     ----------->GT1 ---ID1--------->ARR11(3)          ----------->GT1           --------->AHL20(2)       <---------ANAC46 ------>DAG2           --------->AHL20(2)   --------------->AtSPL8--------->AHL20(2)  --------->ALFIN1   aaaggtaaagaccttcttaagaccataaaattgtgttttgtaaaaacttgtacttactaacaaaataatttataaaatattatttgggatgtggaaaaaa  601200                                                                              --------->YAB1                                                                              -------->ATHB1                                                                             <---------ATHB12                                                                         --------->MYB46(3)                                          <---------HSFB2a(2)            <---------ATHB12                                          --------->HSFB2a(2)            <---------MYB55(2)                                     <----------DOF2                    ------>MYB83                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                --------->ANAC58  ------>ZmHOX2a(2)                  xxxxxxxxxxxxxxxx>smallRNA(s)                          -------->P       <------ZmHOX2a(2)                 xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                      --------->ANAC58--------->AGP1               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                      ------>MYB46(1) <---------ARR11(3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    ------>MYB46(1)  <---------ARR14(2)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    ------>MYB83     <---------GLK1(2)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   ------->GAMYB    ----------->ARR10           --------->ATHB12          <---------DAG2                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <---------YAB1        --------->At5g28300            <-----------GT1<---------ICU4------>ZmHOX2a(1)          --------->ICU4       ----------->GT1           <---------AHL20(2) ------>MYB46(1) <--------    <---------At5g28300  <-----------RAV1(1)            <---------AHL20(2)  ------>MYB83--------->ARR11(3)   <-----------GT1xxxxxxxxxxxxxxxxxx>smallRNA(le3)      --------->AHL20(2) --------->WOX13(1)   <---- ------->DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->AHL20(2)--------->MYB46(3) --------->ARR14(2) ------->DOF2<---------WOX13(1)<----------DOF2   <----------DOF2    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)   aaaagttacagcatgattgtttcaattttggggctgtaacttttttagaagctttaaatttttttttacaacccaaccaatcattccctagatcctttct  601300                                                                                    --------->ANAC46                                                                                   --------->ZAT18                       <---------ANAC58                                            <---------ZAT18            <----------DOF2                                                   <---------ANAC58            <XXXXXXXXXXXXXXXXXXXXXMIR848                                      <---------ANAC58     <----------DOF2   <---------ANAC58                                       <---------ANAC46    <---------DAG2 <---------GLK1(1)                                   --------->AHL20(1) <---------ALFIN1  --------->GLK1(1)                                   <---------AHL20(1) --DOF2    <---------ANAC58     --------->AHL20(2)                     <---------ARR11(3)     ------- ------DOF2<---------ANAC58     <---------ATHB12      ---------->DOF2  --------->ARR11(3)     <------   ttcccaccttttggctttgggagttccatgtccaataaatccaactccaatgtgtttaaagccatgaaatctatatattgtcttgtacacaatgtaagcc  601400                                     --------->ANAC46                                <---------ICU4                     --------->ARR14(2)            <---------AtLEC2                     <---------ARR14(2)--------->ANAC46 --------->MYB52(1) <------ZmHOX2a(1)--------->ANAC58                                         ------- -->At4g35610    --------->CCA1(2)   --------->ANAC58                  --------->ARR11(3) --------->TOE2(3) ---At4g35610 <---------TOE2(3) --------->YAB1   <---------YAB1       --------->At4g35610 --------->TOE1(3)   gagtaacgagttttttgagataggatttgagtattcatcacaccacatattttgaatggaacttcaacgagaagctctcgtacttgatcaaaccttcaca  601500                        <---------ICU4                        --------->ATHB12                       <---------YAB1                       --------->ICU4                                                <------------CBF                  --------->YAB1                                                   <-------TEIL               --------->YAB1                  ----------->GT1                    <------ZmHOX2a(2)              <---------YAB1                 --------->MYB52(1)                   ===================            <---------ICU4            --------->YAB1                             --------->AGP1  <---            <--------HAHB4           <---------ATHB12        ------->TEIL  <------------CBF   ------- <------------CBF<---------YAB1    --------->WOX13(1)    <---------------AtSPL8  <---------ARR11(3) < ----->CBF --------->ICU4        ------------>CBF   ---------->DOF2  <-------TEIL--------->ARR11(3)<-   atccattgaatgcattattatcagaatgattccatatcaatcaaatgtaacgaaaaaaggaagtacctagattcatgaattgagatccattgacaaaaat  601600                                                                                          --------->AHL20(2)                                                                                          <---------AHL20(2)                                                                                          <---------AHL20(1)                                                                                          --------->AHL20(1)                                                                                         --------->AHL20(2)                                                                                      <---------YAB1                                                                                     --------->AHL20(1)                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(1)                                                                                     <---------AHL20(2)                                                                                    <---------AHL20(2)                                      --------->HSFC1(1)                            --------->AHL20(2)     ---------->DOF2         ---------->DOF2 ---------->DOF2                        --------->YAB1 ======HOX2a_HOX2a        <-----------TBP<<<<<<<ZML2                             <---------ICU4 ------ICU4            ----------->GT1<---------HSFB2a(2)                     --------->YAB1 -->YAB1             <---------ANAC46 --------->HSFB2a(2)                 <---------AHL20(2) ------ZmHOX2a(1) <---------ATHB12    <---------HSFC1(1)                 <---------AHL20(2) ---------ID1 ------------>CBF    --------->ZAT18                        --------->AHL20(2)   aaggactaagagcaggtccaatggagggttttaaagggctctagaacaaaagactcttcccatttaagtccaaaattaaatcaaaattatattaaattag  601700                                                     --------->ANAC58                                                     --------->ANAC58                                                  ----------->HVH21                                                ----------->HVH21                                                --------->ALFIN1                                              <---------O2                                              <---------bZIP60(2)                                              <---------ANAC58                                              --------->O2 --------->ATHB12                                              --------->TGA1a                                              <---------TGA1a  <------MYB46(1)                    <---------ARR11(3)        <---------ANAC46 <------MYB83                    --------->ARR11(3)        <---------ANAC55(1)                    <---------GLK1(2)         <---------ANAC58<---------AtMYB61         <---------------AGL15                <xxxxxxxxxxxxxxxxsmallRNA(i)         --------------->AGL15                --------->ANAC55(2)         ------>ZmHOX2a(1)                 ----------->HVH21 <---------WOX13(1)        ----------------->AGL3            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   ---        --------->TOE2(3)              <-----------GT1<xxxxxxxxxxxxxxxxsmallRNA(i)                <--        <-----------------AGL3      ----------->GT1 <---------At5g28300                          ----   <---------HSFB2a(1)            ---------->DOF2<-----------HVH21<---------ANAC58               <---   --------->HSFB2a(1)            ======================bZIP_DOF  <---------ANAC58               <---   aagaaacgttcctaaatttagagatttttgtgaagctaaagtaacttgacgtgtcacggcctgattggtcgtgagtttgagaaaacaattgtttttctga  601800                               --------->ATHB12                          <---------MYB55(2)                          --------->MYB46(3)                         --------->ANAC58                                                  --------->YAB1                         --------->ANAC58                                                 --------->ICU4                         --------->ANAC46                                                 <xxxxxxxxxx        <---------ATHB12------->GAMYB           --------->LBD16                           <---------YAB1 ------>ARR11(3)       <---------ALFIN1     --------->ARR14(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------ARR11(3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)            <---------ANAC58       <---------ARR11(3) ----->GLK1(1)   ------>ZmHOX2a(2)          <---------ARR14(2)    <---------ANAC58 <---------At5g28300 ------GLK1(1) --------->ARR11(3)     --------->YAB1             --------->MYB59  <---------ALFIN1 ------CCA1(2) <---------ARR11(3)<---------WOX13(1)          --------->ATHB12    --------->MYB46(3)   tatctgtgaaatcaattgatcttcaacacccatcgattgatcatcaaatccgaagagaacgactaattgggtctcttatttcatccaccgtgatcatcaa  601900  Previous    Next  AGI:  At2g02280.1    Description:  ATPP2-B4 (Phloem protein 2-B4); carbohydrate binding. Identical to Putative protein PHLOEM PROTEIN 2-LIKE B4 (PP2B4) [Arabidopsis Thaliana] (GB:Q9ZVR3); similar to MEE66 (maternal effect embryo arrest 66) [Arabidopsis thaliana] (TAIR:AT2G02240.1) Range:  from: 600490    to: 601438    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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