Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <------ZmHOX2a(2)                                                             <---------ARR11(3)                                                --------->AHL20(2)           <---------ZAT2                                  ----------->HVH21          --------->ARR11(3)           <----------                                 --------->DEAR3(2)      ---------->DOF2     --------->ZAT2                            --------->ANAC58    <---------AHL20(2)           <---------At4g35610                     --------->CCA1(2)         <---------AHL20(1)            --------->At4g35610 --->TOE1(3)        --------->ARR14(2)         --------->AHL20(2)           --------->ARR14(2) ->GAMYB <---------ZAT6     --------->ANAC58   <---------AHL20(2)           <---------ARR14(2) --->TOE2(3)        <---------ARR14(2)         --------->AHL20(1)    <----------DOF2      <---------YAB1   taatttgagtagagttatggcagatatgagacggaagcgacccattgaatttatttgaagaaagatcaaaactttgcagagctgggagatttatacttgt  586700                 --------->ATHB12                <---------YAB1                <------ZmHOX2a(2)                --------->ICU4               <---------ARR11(3)               --------->ARR11(3)          <------NtERF2                                                       ------->TEIL<---------HSFC1(2)         --------->LBD16                                                      --------->GLK1(2)        --------->DEAR3(1)                                                    <---------ARR11(1)       <---------LBD16                                                        <---------ARR14(2)      --------->LBD16          <---------ATHB12                               --------->ARR14(2)  --------->ARR14(2)    --------->At4g35610                                  <---------ARR14(1)  <---------ARR14(2)    <---------At4g35610                                  <---------CCA1(2) ------ <---------GLK1(1)   ---------->DOF2                    ----------->GT1    ------>ZmHOX2a(2)   <----- -GT1 ------>NtERF2<---------YAB1            <---------GLK1(2)   ---------->DOF2 <----------DOF2   tgggattccgccggagagatcattagagctcaaatcaagagtttgtagattcttcaagttgaaaatcgaaagagggatcgaatctttgatgaagtttcga  586800                                                            <----------DOF2                                                            <---------DAG2                                       <-------TEIL   ------>NtERF2                                      --------->GLK1(2)   <---------At4g35610                                --------->LBD16       ----------->RAV1(1)                               --------->LBD16        <---------ALFIN1                <-----------GT1                              <---------HSFB2a(2)    <---------ETT(1)    <---------ZAT2          ----           --------->TOE2(3)  --------->HSFB2a(2)    ----------->HVH21   --------->ZAT2         <---- --->HSFB2a(2)            <---------ANAC58           --------->ANAC46   --------->ANAC58       ------ ----HSFB2a(2)            <---------ANAC58          --------->LBD16     --------->ANAC58     <-------   gagagattaagaaccctaatctcatctagcttcccgagagattcagacaacttccccgacagctttttgttcccaagctccaatctaataactcttccgg  586900                                                                     <-----------------AGL2                                                                  ------->GAMYB                                                                  ===================================                                                                 --------->MYB46(3)                                  <---------At4g35610            <---------ATHB12  <---------ANAC46    --------->LBD16                           -------->P                      <---- ----->ALFIN1       <---------LBD16                             ------>MYB46(1)                 ----- -----MYB52(1)    <---------ARR14(2)               >>>>>>>>>TBF1===================================== --->LBD16   <---------At4g35610  --------->At4g35610           ------>MYB83      <---------HSFB2a(2) --LBD16   <-----------RAV1(2)    --------->ZAT2>>>>>>>>>TBF1------>ZmHOX2a(2)    --------->HSFB2a(2)   tgttgtttgaattgcaggtgattccggtccagttgcagcagtctgtagaagaagaagaattgatccaaccatctggttttggttcgagatgtgctatgaa  587000            --------->HSFB2a(2) <---------ANAC55(2) --------->TGA1a --------->ANAC46 --------->ANAC58                     --------->ALFIN1 <---------TGA1a               <-------PIF5 --------->ANAC58             <---------ZAT2 --------->ANAC55(1)          <---------At4g35610 <---------bZIP60(1)          --------->At4g35610 --------->O2                 ----------->RAV1(2) <---------O2                 --------->ZAT2        <---------LBD16                            <----- --------->ANAC55(2)         ------>NtERF2         <---------ANAC46                    <---------At4g35610 ==========MYC_MYB     <---------AtLEC2         <---------ARR14(2)                  <------ZmHOX2a(1) -----bZIP60(1)    <---------O2------->PIF5     --------->GLK1(2)     ----------->GT1  --------->At4g35610 ---->bZIP60(1)<-----------HVH21      <---------AtMYB61<------ZmHOX2a(1) <-----------GT1XXXXXXXXXXXXX ==========MYC_MYB <---------ANAC46<---------AtMYB61--------->LBD16--------->YAB1   =================   gtcacgtaaggcttcgaggtcatgtggatggcacctggaggtggtctgagattccgaggaatagaagaaacatagtaactctgtgaggaagatgacgatc  587100               --------->ANAC55(1)               --------->ANAC58               <---------ANAC55(2)         >>>>>>>>>TBF1 -ZmHOX2a(2)   --------->ANAC46         >>>>>>>>>TBF1          <----------DOF2     <-------TEIL XXXXXXX>MIR823--------->ANAC58  <------ZmHOX2a(1)   <---------TOE2(3)         <---------TOE2(3) =HOX2a_HOX2a  --------->ANAC55(2)   >>>>>>>>>TBF1 ---------->DOF2             <---------YAB1   acacaaaaacgatgaacacgcatttcaagaacagaggaagaagaagaagaatataaaggaagaaactttgagagaagaattaagattcaacaaaaaccct  587200                                                            --------->YAB1                --------->ANAC46       ----------------->AGL1                --------->ANAC58   <------------CBF        <---------ATHB12                --------->ANAC58  --------->ATHB12       --------->WOX13(1)             <---------ZAT14      <---------ICU4       <---------YAB1             --------->ARR14(2)  --------->ICU4        ------------>CBF          ----------->GT1             <---------ARR14(2)  <---------YAB1     --------->ICU4             ----------->GT1 <-----  <---------GLK1(1)           <---------YAB1   <---------At4g35610     --------->ANAC58     ------>NtERF2  --------->GLK1(1)--------->MYB52(1)<-----------GT1<---------YAB1     --------->ANAC58    <---------RAP2.6(2)   tgagaaatctgagagtatacgaaacgggttttctgattattgccattttagatgatgatcaatgaagatgaagaagcaagagagagaaaaatggcgactt  587300                          <---------ANAC58                          <---------ANAC58               ------->GAMYB            ----------->RAV1(1)         --------->ANAC55(1)         --------->ANAC55(2) <-------GAMYB         <---------ANAC55(2)--------->ALFIN1         --------->HSFB2a(2)                  <----------DOF2         --------->ANAC58 <------MYB83            --------->GLK1(2)                   <------MYB46(1)         --------->ANAC58 <------MYB46(1)    --------->YAB1                          --------->MYB59         --------->ANAC46<---------MYB46(3)--------->ANAC58                          <---------AtMYB61       <---------ALFIN1  --------->MYB55(2)--------->ANAC46           --------->ALFIN1<------MYB83      <---------REM1(2) <---------ANAC46   --------->ANAC58       ---------->DOF2<---------YAB1 -----DOF2  --------->MYB52(1)     <---------AHL20(2)<---------HSFB2a(2)         <---------ANAC46<---   ttgacttcaacacgcaacagcaagtagtgggtgttgttttaatgcaagcaaaattctagagagagatagaaagtggaagagttgtgtttggtcttttttc  587400                        <---------AHL20(2)                         <---------AHL20(1)                        --------->AHL20(2)                         <---------AHL20(2)                      <----------DOF2                            <---------AHL20(2)                   --------->GLK1(2)                             <---------YAB1            <---------AHL20(2)                   <---------ARR11(3)                          <---------ICU4             <---------AHL20(2)                   --------->ARR11(3)                         --------->ICU4   --------->ARR11(3)                  --------->RVE1(1)                        --------->AHL20(2)  --------->AHL20(1)             --------->At5g28300       >>>>>>>>>TBF1 <----------DOF2<---------YAB1 ----------->GT1         --------->MYB52(1)         >>>>>>>>>TBF1  --------->HSFC1(2)          <---------AHL20(1) ------YAB1 ----------->GT1  ---------->DOF2       <---------HSFC1(2)  <-----------GT1    --------->AHL20(2)   tgatacagagcaaacagtaaaaatctttaaataaagaagaagaagaaataagaagctttgaataaatattatttttccaaatattttgtgaattaatttg  587500                                               <---------AHL20(2)                                               --------->AHL20(2)                                               --------->AHL20(1)                                 --------->LBD16                                <---------ANAC55(1)   <---------ANAC58                                <---------ANAC46      <---------ANAC46                                <---------ANAC58 --------->ATHB51                                <---------ANAC58<---------YAB1                           <----------DOF2     <---------AHL20(1)                        <-----------ARR10     --------->YAB1                        <---------ARR11(3)   <---------ATHB51                        --------->ARR11(3) --------->WOX13(1)                           --------->YAB1              <---------YAB1    --------->ANAC55(2)   <---------ANAC58             <---------ATHB12<-   tgtttttggaaaatttgttatagacaaatcttttccgtgttttgtcaattataattgagtgtgtttagtcatatatgaagtcttaatcaataacattgac  587600  Previous    Next  AGI:  At2g02220.1    Description:  ATPSKR1/PSKR1 (PHYTOSULFOKIN RECEPTOR 1); ATP binding / peptide receptor/ protein serine/threonine kinase. Identical to Putative phytosulfokine receptor precursor (PSKR) [Arabidopsis Thaliana] (GB:Q9ZVR7;GB:Q8S8L2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G72300.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G53890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15421.1); similar to putative phytosulfokine receptor precursor [Oryza sativa (japonica cultivar-group)] (GB:BAD23737.1); similar to Phytosulfokine Range:  from: 583977    to: 587123    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version