Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ------->GAMYB                                            -------->P                                          <---------MYB111(1)                                         --------->MYB46(3)                                         <---------MYB52(2) -------------->AG                  >>>>>>>GRF7 ->MYB83 --------->WOX13(1)      <-----------HVH21                                    --------->REM1(1) ->MYB46(1)             --------->ANAC55(2) ------>MYB46(1)                       --------->At4g35610 -->AtMYB61         <---------AHL20(2)   --------->DEAR3(2)                       --------->ZAT2   <- ->HSFC1(2)         --------->YAB1 <-----------RAV1(2)                            <---------At4g35610 --HSFB2a(1)        --------->AHL20(2)<------ZmHOX2a(1)                --------->ANAC58         ----- --HSFC1(2)<---------ATHB12<-----------GT1--------->AtMYB61            --------->ANAC46   --------->ARR11(3) ->HSFB2a(1)--------->YAB1----------->HVH21 ------>MYB83               --------->ANAC58   <---------ARR11(3)   cccaaaaccatcaatcatagaattatatgtaacagtgtcaggaaccaaccctctaaacttcatttcttcaaacaagcctctagcagcttcaacatctcct  551800                     --------->AHL20(2)                       --------->YAB1                     <---------AHL20(1)                       <---------ICU4                     --------->AHL20(1)                      <---------ATHB12                     <---------AHL20(2)                     ------>MYB83                    --------->AHL20(2)                     --------->WOX13(1)                   <---------YAB1                    --------->ANAC58                 --------->YAB1                      --------->ANAC58                 <---------ICU4                --------->ANAC58                 <--------HAHB4                --------->ANAC58     <----------DOF2                <---------YAB1            <------MYB83--------->At4g35610                          <- ---------DOF2  <---------ATHB12          <---------DEAR3(2)------>MYB46(1)          --------->ANAC46 ->ZmHOX2a(1) --------->WOX13(1)          <------MYB46(1) --------->MYB46(3)     <-----------HVH21 --   tctttacacatacaatctatcattatattgtaagtaaacacagtcggtctcgcaccagcaccaatcatgtctttgaaaaacctcttcacatcatcagtct  551900                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                               ------                                                                                               ======              --------->TOE2(2) <---------AtLEC2                                              ------- ----------------AGL1   <-----------GT1                                                   <---------ANAC58 --------------->AG   <---------ATHB12                                                    <---------ANAC58   tccctaatttcgcaaacctatgcaataaaccgttgcaagaccgagtttttgggaaaactctaaatctcttcatcttagagaaacactgaatagcttcctc  552000          <------ZmHOX2a(2)         <---------ARR11(3)      --------->HSFB2a(2)      ------>ZmHOX2a(1) --------ATHB12       --------->ANAC46   --------->ANAC58                     --------->ANAC46 ------>ANAC58      --------->ZAT6       --------->ANAC58             --------->REM1(2) ------>ANAC58 --------->YAB1            --------->ANAC46          <---------ANAC46 >ZmHOX2a(1)  <---------ATHB12         --------->ZAT6              <---------ANAC58 ================HOX2a_HOX2a---------->DOF2                 <---------ALFIN1----------->RAV1(1)    <- -->TOE2(3) --------->WOX13(1)         <---------ALFIN1<-------TEIL<---------ANAC58 -----------------   aagcattcctagatcaatcaaaacactaaacaaagcatcaaacactccaaaaccaggtacacacacattccttgtagaccacagaacatcgaaaacatcg  552100                                                                                            ---------                                                                                           <---------GLK1(2)      <----------DOF2                      --------->YAB1                        --------->ZAT14   ------>NtERF2              --------->ZAT18                              <---------At4g35610   <------NtERF2             <------ZmHOX2a(1)                             --------->At4g35610 <---------ZAT18           <---------TOE2(3) <---------YAB1              --------->ZAT18 ----------->ARR10 --------SPL7          <----------DOF2    <---------YAB1            <---------GLK1(2)----------->GT1 ---->WRI1         <---------CCA1(2)    --------->YAB1         --------->MYB52(1)<---------ZAT14   cagtccgcctttgacaaaaccatctctttaaggacactattagcatcataatacattctagcacaaaacagaatgtgagctactatacagtaagattcta  552200                                                                  ------------>CBF                                                                <----------DOF2                 <---------ANAC58                          <XXXXXXXXXXXXXXXXXXXXMIR159C        ------                 --------->ANAC55(2)                       <XXXXXXXXXXXXXXXXXXXXMIR319C        <-----                 <---------ANAC55(2)        ---------->DOF2<XXXXXXXXXXXXXXXXXXXXMIR159B   --------->ANAC58 >GLK1(2)        <---------ANAC58      --------->GLK1(2)  --------->ARR11(3)              --------->ANAC58   cagagtgcttaaacccattacgagtcatcgaccatttgaagaatttgaaagctaatttagggtcttctttcaattcaacgagaacccttggaacccaaat  552300                                                   <------------CBF                    --------->ARR14(2)                                                  --------->ATHB12      ------>ZmHOX2a(2)                                                 <---------YAB1         ------------>CBF                                                 <------ZmHOX2a(2)     <------ZmHOX2a(2)                                                <---------ARR11(3)    --------->ARR14(2)                                    <---------ARR11(3)                <---------ARR14(2)   <---------LBD16                                    --------->ARR11(3)             <---------ANAC55(2) <-----------ARR10                                    <-----------ARR10              --------->ANAC55(2) <---------ARR14(3)                      <---------DAG2--------->ARR14(2)           --------->MYB52(1)    --------->GLK1(2)                  --------->DAG2   =====================HOX2a_HOX2a--------->ANAC46    --------->ARR11(3) <---------At4g35610  <----------DOF2<------ZmHOX2a(2)         <---------DAG2          <---------ARR11(3) --->ARR14(2)    ---------->DOF2   <------ZmHOX2a(1)           <----------DOF2         --------->ARR14(3) ----ARR14(2)<---------ATHB12   <---------LBD16 --------->ARR11(3)<---------LBD16  --------->YAB1----   cggagctaatgtcaaatcaaaaagcttttcgagtccaggatcatcccatagatcattgtgaacaactttacggatccaatctctatcaaaatcttcggaa  552400                        ---------->DOF2                      --------->ANAC58                      --------->ANAC58             <---------DAG2          <---------------AGL15          --------------->AGL15         <-----------------AGL2         <-----------------AGL3                                   ---------->DOF2         <-----------------AG                                   --------->ANAC58         ----------------->AGL1                                 --------->ANAC58         <-----------------AGL1                               --------->MYB52(1)        <------------CBF    <---------------AtSPL3                                    ------>MYB83        <---------TOE2(3)    --------------->AtSPL3                                    ------>MYB46(1)    --------->DAG2    <---------------AtSPL8            --------->YAB1    --------->ZAT18         ---------->DOF2 ----->ICU4  <----------DOF2   >>>>>>>>>>GATA-1         <---------ZAT18        --------->CCA1(2) <---   taagtagaagtaccgcttttggtaacgaaagggtatcgaatgatacagagaaaactagtgaaccaaacgaaagggcaagagataaaggaagattgagaag  552500                                                                                --------->TOE2(2)                                                                                --------->TOE1(2)                                                                               <---------HSFB2a(1)                                                                              <---------ARR14(2)                                                                              --------->GLK1(2)                                                                             <---------GLK1(1)                                                                       <---------ANAC58                                                                       <---------ANAC46        ------                                                              <---------ANAC58--------->ARR14(2)                               <---------WOX13(1)             <---------ANAC58---------->TaMYB80   <------ZmHOX2a(1)         --------->ATHB12         >>>>>>>>>TBF1    <---------ANAC58   <---------ANAC46 ---ZmHOX2a(1)               <---------MYB46(3)    >>>>>>>>>TBF1  <---------AtLEC2       <---------TOE2(3)   gagaaggagaagagagagggaaacagagaggtgattggatttgagagagggaagaagaagaagggcttacatggcgagggaatctgcgattaacgtgaag  552600                                      ---------->DOF2                                 ----------->GT1                                --------->DAG2                               ---------->DOF2                           <------ZmHOX2a(1)    <---------ANAC46      --------->LBD16             ------->TEIL ----->GT1              <---------LBD16 ----------->GT1                                         <----   aaaattgcgaagagaacagaacattttcaggaaaaaagttaaaagtgaatagaatgagcctcatggtttaactcagagacattgtattctatggtattca  552700  Previous    Next  AGI:  At2g02150.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G01740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15427.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 547260    to: 552228    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version