Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->YAB1                                                                       <---------YAB1                                                                      --------->AHL20(2)                                                                      <---------AHL20(1)                                                                      <---------AHL20(2)                                                                      --------->AHL20(1)                                                                     --------->YAB1                                                                    <---------YAB1                                                                  --------->YAB1                 <---------AHL20(2)                             --------->ANAC58 ---------ICU4   --------->AHL20(2)--------->HSFB2a(2)          --------->ANAC58                 <--- >DOF2       --------->ICU4        <---------HSFB2a(2)     --------->WOX13(1)------->TEIL   <--------   gataatgtcgatgtgatatttatttgatgtcgattacctagaagagtctttccattttcatctatcaagcattataatgaacgtctaagttcaaatcaat  541500                                                  ------>ZmHOX2a(1)                                                  <---------YAB1                                                 --------->TOE2(3)                                             <----------DOF2                          <---------AHL20(1)=============HOX2a_HOX2a     ----------->GT1      --------->AHL20(1)------>ZmHOX2a(2) ------MYB46(3)        --------->AHL20(2) <---------ARR11(3)                     ------>ZmHOX2a(1) -ATHB12           <---------YAB1         --------->ARR11(3)     --------->GLK1(2)   tgttgatgagtaaatagactcatgtttatatattagtgtatattgatctttcctcattgtctatgaaattcttggtatgcttcctctcgagatgctaata  541600                                                                                                <----                                                                                              <------                                          <-----------GT1                                     -------                                  ------->TEIL               <----------DOF2           <---------AHL20(2)                               <---------ANAC55(2)   ----------->GT1                <---------AHL20(1)                       --------->YAB1    ----------->HVH21--------->ICU4            --------->ARR11(3)                     <---------YAB1   ------->TEIL--------->YAB1          ---------->DOF2   ---------            <---------ARR11(3) <---------YAB1    <---------YAB1    --------->YAB1   --------->AHL20(1)            --------->ARR11(3) <---------ANAC46  <---------ATHB12 <---------YAB1    <---------ARR11(3)   acatatatgtgtattatcttgttattcatggttatgtatgtatatgaccctatgatggtaattcttttttgataaccaaagtagaatattttaaaatcat  541700                                                                                                    <                                                                                                 <---                                                                                              <------                                                                                              -------        --------->ZAT18                                                                 <---------ANAC58 -----YAB1          --------->DAG2       <---------ANAC58                  <---------ZAT6    <------- ---ICU4<---------ZAT14                  <---------ANAC58             <---------At4g35610    -------- -->YAB1<---------ZAT18     --------->YAB1                           --------->ANAC58   <---------ANAC58 >ARR11(3)         ---------->DOF2       <---------ANAC46            --------->ANAC58   <---------ANAC46   gaaaaacgagtggacaaaacataaagcttatagtaagcttgtagtgtgtctatatagaaggtagttttggtaagctactggtaatagttttcgtattaat  541800        --------->ARR11(3)        <---------ARR11(3)       <---------CCA1(2)     ----------->TBP -----------GT1                          <----------TaMYB80                                        <- ------AHL20(2)                         --------->ARR14(2)                                      <---- ---AHL20(2)              --------->YAB1<---------ARR14(2)                   ---------->DOF2    ----- -->AHL20(2)<---------ANAC58            ------->TEIL            <-----------HVH21               *TSS --AHL20(2) <---------ANAC58       --------->MYB52(1)          --------->WOX13(1)            <------- ->AHL20(2) <---------ANAC46     <---------MYB52(2)            --------->ANAC46----------->GT1-------   ttatactatatatctcgtgtttgtgtaattagaaaacaaacgtatatactgaaacctagacttatccatcacacatatagaaagtcaaatattctatgat  541900     <---------YAB1                                              --------------->AtSPL8 <---------ANAC58                                               <---------ANAC46 <---------ANAC58   ----------->RAV1(1)                         <---------ANAC58 --------YAB1    --------->ANAC58                  <---------ANAC58        --------->GLK1(2) -----YAB1       --------->ANAC58                  <---------ANAC46     --------->ARR11(3)       <--- ---->ICU4      ------->TEIL                       <---------ANAC58     <---------ARR11(3) <---------AHL20(2) --YAB1     ------->TEIL <-------TEIL         <---------ICU4    <---------ANAC58           --------->AHL20(2) -->YAB1   <---------AtLEC2           --------->YAB1         <-----------GT1       ----------->GT1   gattcttgtgaatgcatgtatgcaacatacacaaatacactcatataaacatgtcttgtttttttgccttgtacgatattctatatggtttatataattc  542000                  <---------MYB46(3)           --------->WRKY18(1)           ----------->HVH21                                             --------->ZAT14          <-----------HVH21  --------->GLK1(1)                    <---------ANAC58         <------MYB46(1)    --------->ARR14(2)                    <---------ANAC58         <------MYB83       <---------ARR14(2)                <---------ANAC58        --------->MYB59  --------->ANAC58                 ----------->HVH21       <-------TEIL      --------->ANAC58       ---------->DOF2   <---------ANAC46     <---------SPL7   <------NtERF2         <---------------------WRI1   <---------ZAT14 -------DOF2     --------->ALFIN1         <------ZmHOX2a(1)   <---------ANAC58                     <-   tttagggggttcggtcacggtggaggcaaggatttgcaaatcgaggagccaaaagttcaagggaccgtgcgtgagtgaagacaactgtgccaacgtttgc  542100             <---------HSFB2a(2)             --------->HSFB2a(2)            <<<<<<<<<MYB2            <---------LBD16                <-------GAMYB      --------->HSFB2a(1)               ------>NtERF2 --------->ANAC58      <---------WOX13(1) <---------DEAR3(1)        <---------GLK1(2)      <---------AHL20(2) --------->ANAC46    --------->ATHB12 <---------LBD16    ------->GAMYB                    --------->AHL20(2) --------->ANAC58    <---------MYB46(3) --------->LBD16 <---------ALFIN1<---------YAB1    <---------AHL20(2) --------ALFIN1     <---------YAB1   ------>ZmHOX2a(1)----------->RAV1(1)     <---------ANAC55(2)   cacaccgaaggttttcccgatggtgattgcgacggactcctccggcgttgctactgcaacacacattgctgattctcattacatatatcaaattaaatca  542200                                                             <---------DAG2                                                            --------->ANAC46                                                         <-------TEIL                                                       <---------SPL7                                                      <---------ANAC58                                                      <---------ANAC58                                                      <---------ANAC46                                                     <---------------AtSPL8                                                     --------------->AtSPL3      --------->ANAC58                     <---------AHL20(2)              --------------->AtSPL8      --------->ANAC58                    --------->AHL20(1)         <---------YAB1<----------DOF2     --------->AtLEC2                    <---------AHL20(1)        ------>ZmHOX2a(2)     --------->AHL20(2)              --------->ZAT6     <---------AHL20(2)  <---------TOE2(3)    --------->MYB59       --------->ZAT14   <---------AHL20(2) --------->ARR11(3)    --------->TOE2(3)             <----       <---------ZAT14   <-----------GT1    <---------ARR11(3)--------->ZAT14 <-------TEIL     ------    ----------->GT1 <---------ARR11(3)  --------------------->WRI1<----------DOF2--------->ANAC46   actatatagtaaactaactctatatatttacatgtttattttcttcgatcttattgacgtacactttactttaaattcggttcatgcaacttatgtgagg  542300                                                                                      <---------AHL20(2)                                                                                     <---------AHL20(2)                                                                                     <---------AHL20(1)                                                                                     --------->AHL20(1)                                                                        --------->ANAC58                                                                        --------->ANAC58     --------                                                                       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     xxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                     xxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                    xxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                   <---------TOE2(2) --------->AHL20(2)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                   xxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                           --------->TOE2(3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                     --------->YAB1              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                 <---------AHL20(2)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                       --------------->AtSPL8                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       --------------->AtSPL3                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       ------>ZmHOX2a(1)   <-------TEIL <-----------GT1        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->TOE1(3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      --------->TOE1(2)<---------------AtSPL8                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->RVE1(1)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     --------->AHL20(2)  <xxxxxxxxxxxxxxxxxx --ZmHOX2a(1) <---------AHL20(2) --------->AHL20(2)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   ----   aaaaaaatcctactatattatttgggaagtacattttaaatataaccttaatttttgtaagaaattacataggtatgccattagaaataaaattttaaag  542400  Previous    Next  AGI:  At2g02135.1    Description:  Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. Range:  from: 541896    to: 542172    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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