Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->HSFB2a(1)                                           --------->HSFB2a(2)         <---------HSFB2a(1)                                           <---------HSFB2a(2)       ----------->RAV1(1)                  <-----------GT1        <------ZmHOX2a(2)         --------->LBD16               <---------ICU4           --------->ARR11(3)        --------->ANAC46               --------->YAB1         <---------YAB1             <---------LBD16                   <-              <---------YAB1     ===============HOX2a_HOX2a  <----------DOF2                     <---            --------->YAB1       <------ZmHOX2a(1)         <---------YAB1    XXXXXXXXXXXXXXXXXXX>MIR158A --------->AHL20(2)            <---------TOE2(3)          <---------ARR11(3) XXXXXXXXXXXXXXXXXXX>MIR158B ->GT1     <---------ATHB12   --------->YAB1    <----------ID1  <---------At5g28300    ---------->DOF2   catatatatacaaatgataataacctgtagaatgaggattaagatcgagaacgacgaggttatctttaccgcaacattccaaacgtagccaaagctctat  522900                                                            ------->GAMYB                                                           --------->ANAC58                                                           --------->ANAC46                                                           --------->ANAC58                                                         --------->MYB52(1)                                                       <---------MYB55(2)                                                      ------>MYB46(1)                                                      ------>MYB83                                                    --------->AtMYB61                                                   --------->MYB46(3)                        <---------At4g35610      <-----------GT1                        <---------ZAT2           --------->ANAC46                        <---------YAB1                   <---------ARR14(2)           --------->MYB46(3)          --------->GLK1(2)                   --------->ARR14(2)         --------->ARR14(2)           <---------ARR14(2) --------YAB1  ------->TEIL                   <---------ARR14(2)           --------->ARR14(2) --------GT1   <-------TEIL           ------>ZmHOX2a(1)--------->MYB46(3)  <---------GLK1(2)      <--   taccatacccctcaatgtacatatccagcttataagactcctatccagtatccaccatccaacgaaacacactctcagattcttccacattatgaataca  523000                                                 --------->AtLEC2                                                 --------->ANAC58         --------->AHL20(2)                      --------->ANAC58         <---------ICU4                          --------->ANAC46        <---------AHL20(2)                <---------ARR11(1)        <---------ATHB51    <--------HAHB4--------->ARR11(3)        <---------ATHB12    <---------ICU4<---------ARR11(3)                                  -------        --------->AHL20(2) <---------YAB1 --------->ARR14(2)                          <-----------HVH21      ------>MYB83       --------->YAB1  <---------ARR14(1)                        --------->ALFIN1      ------>MYB46(1)    ------->GAMYB   ------>MYB46(1)                   <----------DOF2  <--------    ------->GAMYB       --------->MYB46(3)<---------ARR14(2)          <-----------GT1<---------ANAC58 --------->WOX13(1)--------->TOE2(3)     ------>MYB83             <---------AHL20(2) <---------ANAC58 ---------HVH21   --------->At4g35610    <---------CCA1(2)        --------->AHL20(2)<-------TEIL   tgtcaaccaaataatttctcacctcaaccatcatttcaaaaccaaatcttcaagcaaaccccatggatttaaaaacccttttcaagtgcgtcaaacaaac  523100                                                                                                 ----                                                       <---------MYB52(1)                        <---                                <---------MYB52(1)  ------>ZmHOX2a(2)                   <---------CCA1(2)                              <---------MYB46(3)   --------->GLK1(1)            ---------->DOF2  <---    <----------DOF2      --------->ZAT14           <------ZmHOX2a(2)        <---------ICU4       ---- --------->ANAC58    --------->DAG2               <---------ARR14(2)       --------->ICU4  <---------ANAC58 --------->ANAC58   ---------->DOF2           <---------LBD16         --------->ANAC55(2)  <---------ANAC46 -->ANAC46       --------->HSFB2a(2)     <---------CCA1(2)   --------->ZAT18--------->ATHB12    <---- -MYB52(2)       <---------HSFB2a(2)--------->PCF2--------->ARR14(2)  <---------ANAC55(2)  <---------ANAC58   cacaagcttttagatttgtcgagaaagtgaagtcgttgggcccatttcttcggatcccttaagttcaccattaagtactcattagagcccatttcttggg  523200                             <----------DOF2                     ------->MYC3                         <---------CCA1(2)               --------->ANAC58 -->NtERF2           --------->ANAC58          <----------DOF2   <-------MYC3                     <-- ------PCF5          --------->ANAC58        <----------DOF2----------->RAV1(1)                <----- ------TCP15(1)     <---------ZAT18        ------>NtERF2 --------->ANAC46                    <------- ----->PCF2       <------NtERF2            <---------At4g35610<---------ALFIN1     *TSS<----------DOF2 -----PCF2      <---------DEAR3(1)   <------ZmHOX2a(1)   --------->ANAC58  <-----------ARR10 --------   gcccattaagagattaagtccgcgcgcatagcttttggaggatgccgctcttttgtaagaagcaacacgttgttgagtctctaacctttctttgaaatct  523300                              --------->AHL20(2)  <----------DOF2        <-------TEIL                                   --------->YAB1 <---------DAG2   --------->At4g35610                                <--------ATHB1 -------WRKY18(1) <---------At4g35610                                --------->YAB1 ----ICU4         --------->LBD16               <<<<<<<<<TBF1       --------->ICU4 --ARR11(3)      --------->ANAC46            <<<<<<<<<TBF1          <---------ATHB51--------->TOE2(3) ->ARR11(3)     <---------LBD16<---------AHL20(2)  <<<<<<<<<TBF1    <---------ATHB12--------->YAB1   tgacctttcccttccttctccgctaaattcgttttaatttcatcttcttcttcttcttcaattcgatgcaataatagtcacttcaatctcaatctagggt  523400                                                                     <---------HSFB2a(2)                                                                     --------->HSFB2a(2)                         ---------->ID1                              <---------LBD16         --------                         <-----------GT1                    ----------->GT1                 <--------                        <-----------GT1                    <-------TEIL           --------->ANAC58                       <------------------------ANAC81   --------->ARR14(2)       --------->ANAC58     <-----------GT1<---------AHL20(2)                   <---------ARR14(2)--------->At4g35610   <---   tttcaattttcttcatgtgaattttttttccccttcttctcaatttcaattcaatctgggattcgtaaattctcggaagatgaaacgcgatttcgacgaa  523500                                                                                        --------->GLK1(2)                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                        ------->TEIL                                                                                    <------NtERF2 <--                                                                                   ------>NtERF2  ---                                                                                  <---------DEAR3(1)                                                                                  ----------->HVH21                                                                                  --------->DEAR3(1)                                                                                 ------>NtERF2   ----                                                                                 <------NtERF2 ------      <------ZmHOX2a(1)                                  --------->ANAC58        --------->ATERF1(1)   --------->HSFB2a(2)         <---------TOE2(3)         --------->ANAC58        --------->RAP2.3(1)   --------->LBD16            <-----------GT1           <---------LBD16        <---------DEAR3(1)<--- ->ANAC46            <---------ALFIN1              --------->MYB46(3)         <---------LBD16 ------- -------------WRI1   --------->ZAT6        <---------ARR11(3)    --------->LBD16<---------ATERF1(1)<- ------ARR11(3)     --------->ZAT14   --------->HSFB2a(2)--------->ANAC46   <---------LBD16   -------   atctccgaggaagagtggtctcaacactcgtttaacgcttcgcgagttcttaaacgaccacggactccgaagaagactcgcgcggcgacgaatccaacgc  523600                                                                                                  <--                                                                                                 ----                                                                                                 ----                                          <---------YAB1                                         ----                                       ----------->TGA1                                         -----                              ----------->HVH21                                                 -----                           --------->TOE1(2)                                                    <----                         <---------ARR14(3)                                                     <---- ---------HVH21          --------->ARR14(3)                                                    <----- --->NtERF2              --------->ARR11(3)                                                    <----- ----->DEAR3(1)       <------ZmHOX2a(1)----------->HVH21                                      ------- ->GAMYB        <----------DOF2     <---------DEAR3(1)                                 <---------ARR14(2) ------ANAC46  <---------ANAC58    <------NtERF2                              <---------TOE2(3)------ -->ANAC46<----------DOF2<---------ARR11(3)--------->ATHB12         <---------MYB46(3) --------->ARR14(2) -----NtERF2   <---------ANAC58   ------>NtERF2                    <---------YAB1     <------ZmHOX2a(1) -->DEAR3(1)   <---------ANAC46  <---------DEAR3(1)             <---------AtMYB61   <---------TOE2(3)   cgtcgattgagtcttttgcgtttaggagaccttcgacggcgatgacgattgagagtaatagcagcgatggtgattgtgttgagattgaggatttgggaga  523700  <---------GLK1(2)  --------->ARR14(2)  <---------ARR14(2)                                                                             <--- -----TEIL                                                                                       <--- ----->CCA1(2)                                                                                  ----- ----->ARR14(1)                                                                                 <---- ----->GLK1(2)                                                                       <---------At4g35610 ---->ARR11(1)                                                                       --------->At4g35610 ---->ARR14(2)                                                                      --------->ANAC46 -----ARR14(2)                                                                      <---------DEAR3(1) -----GLK1(2)                                                                      --------->ZAT18 ----HSFC1(2)                   --------->ARR14(2)                                <---------ANAC58 ----HSFB2a(1)      <---------YAB1            <------ZmHOX2a(1)        <---------TOE2(3)       <----- ---->ARR10   --------->ICU4    <---------ARR14(2)         --------->ALFIN1       <---------ANAC58 <- --->HSFB2a(1)<---------YAB1   <------ZmHOX2a(1)     >>>>>>>>>TBF1     <---------TOE1(3)------>NtERF2   ttcggattcggatgtgaagattgtgaatggtgaggatttgttgttagaggatgaagaagaagtggaagagactaaggttgtgatgcgcgctgcgagagtt  523800  Previous    Next  AGI:  At2g02090.1    Description:  CHR19/ETL1 (chromatin remodeling 19); ATP binding / DNA binding / helicase. similar to CHR11 (CHROMATIN-REMODELING PROTEIN 11), DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT3G06400.1); similar to hypothetical protein OsJ_015144 [Oryza sativa (japonica cultivar-group)] (GB:EAZ31661.1); similar to SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] (GB:EDQ55871.1); similar to hypothetical protein OsI_016424 [Oryza sativa (indica cultivar-group)] (GB:EAY95191.1); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains Range:  from: 523283    to: 527011    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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