Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ----------->GT1        <---------ANAC58        <---------ANAC58                 <-----------GT1       <---------------------WRI1  <---------AHL20(2)  <---------AHL20(2)         --------->AHL20(2)--------->AHL20(2)              --------->YAB1  --------->AHL20(2)         <---------AHL20(2)<---------AHL20(2)            ------->TEIL ------YAB1        ---------->DOF2--------->AHL20(2)                  --------->YAB1   ttatttaaatgcgttacaaacaaaagaaaaattatataaaattttacaaataaatgtatagagtttttagtatcatatgtatcatacatatgaaattaga  505100                --------->STY1(2)               ------>MYB83               ------>MYB46(1)               --------->ANAC58               --------->ANAC58            --------->MYB46(3)           -------->P                                                                               <          --------->MYB52(1)                                          ------->TEIL                  <        <---------MYB52(2)              --------->ARR11(3)      --------->ARR14(2)                  -      ------>MYB83                      <-----------ARR10       <---------ARR14(2)                <--      ------>MYB46(1)                   <---------ARR11(3)<-----------GT1                         <--    <---------MYB46(2)             <---------YAB1    --------->AHL20(2)       --------->ZAT6      <--    <---------MYB59     <---------AHL20(2)           <---------AHL20(2) <----------DOF2          ----   --------->ANAC46     --------->AHL20(2)  <-----------GT1  ------->GAMYB  <-----------GT1      <---   gctataccaaactaaccaagctagatttaaattcagtttgattatcttaccctatttttttaaccgaatatgaacttttaacactctaggctataacatt  505200      <---------ANAC46 <------MYB83 ----------->GT1 <---------MYB46(3) <------MYB46(1)                                 --------->At4g35610 ---------DEAR3(1)                               ----------->RAV1(2) ---------AtMYB61                                <---------At4g35610 -------->ALFIN1                     <---------ALFIN1 -------ANAC58                      --------->ZAT14 -------ANAC58                      <---------REM1(2)                                   <---------GLK1(2) -------ANAC46             <-----------GT1     <-----------GT1                        --------->ANAC58 ----->MYB55(2)        <----------DOF2    <----------DOF2<----------DOF2              --------->ANAC58 ------MYB46(3)    <----------DOF2  <---------ZAT14 <-----------HVH21        <-----------GT1   gggtggtgacttatatttcttctttctttttactagcctacactctttttcacctgtcactttcaacttctctcttctattacctcacaagaatttctat  505300                                                              ----------------->AGL3                                                           --------->ARR11(3)                                                          <----------TaMYB80                                                          --------->GLK1(1)                                                          <---------KAN4(1)                                                          --------->KAN4(1)                                                          --------->HSFB2a(1)                --------->ARR11(3)                        <---------HSFB2a(1)               <---------CCA1(2)                          <---------GLK1(1)            <---------AHL20(2)                      <---------LBD16           <---------AHL20(2)                     --------->GLK1(2)           --------->AHL20(2)                     <---------ARR14(2)        <--------ATHB1                            --------->ARR11(3)        --------->YAB1                   --------->AHL20(2)--------->KAN4(2)        <---------ICU4                   <---------AHL20(2)--------->ARR14(2)        <---------AHL20(1)            --------->WOX13(1) ---------->TaMYB80               <---------GLK1(1)        --------->AHL20(2)        <-----------GT1 --------->ARR14(2)                      --------->CCA1(2)        <---------AHL20(2)   ----------->GT1     --------->RVE1(1)                       --------->ARR11(3)       --------->ICU4       --------->DAG2   <---------AHL20(2)                          <---------ARR11(3)     --------->YAB1        ---------->DOF2   --------->AHL20(2)                      --------->CCA1(2)    <---------AHL20(2) <---------AHL20(2)<---------AHL20(1)<---------ARR11(3)     <---------TOE2(3)   <---------AHL20(2)  --------->AHL20(2)--------->AHL20(1)<---------ARR14(2)--------->ATHB12   --------->AHL20(2) --------->AHL20(2)<---------ATHB12 <---------KAN4(2) <----------DOF2--------->GLK1(1)   gtttttttaataattttatatctattaaaaaaagtataaccaattaattaaaaatctggaatatcccaattttagggctttattgagataagatatcagt  505400                                                                      <----------DOF2                             <-----------ARR10                      ---------->ID1                   --------->TOE2(3)                               <-----------GT1                 <---------TOE1(3)                              <------------------------ANAC81                 <---------TOE2(3)                             <------------------------ANAC81               <---------AHL20(2)                            <------------------------ANAC81              --------->AHL20(2)                          <----------DOF2              <---------AHL20(2)                       <------------------------ANAC81*TSS   --------       ---------->DOF2---------->DOF2        <XXXXXXXXXXXXXXXXXXXXMIR1886.1    <----------DOF2<------   ggaagtcaaaaaagaatttaatgttaaagagtttcttctctctaatttcatttcatttctctttttttttttctttttcttctttctctctctcaccatc  505500                                                                                             ------>MYB83                                                                                             ------>MYB46(1)                                          --------->ZAT2                                   <---------MYB46(2)                                          <---------At4g35610                              <---------MYB111(1)                                       <---------At4g35610                ------>MYB83     <---------MYB59                                       --------->LBD16                    ------>MYB46(1) --------->ANAC46                                       --------->At4g35610           >>>>>>>>>>WRKY43   <---------ALFIN1                        <---------At4g35610        <----------DOF2   >>>>>>>>>>WRKY38  <---------MYB55(2) ->AtMYB61            <---------RAP2.6(2) --------->At4g35610        >>>>>>>>>>WRKY26------>ZmHOX2a(1) -----HVH21   --------->GLK1(2)     ------>ZmHOX2a(1)       <---------ETT(1)     <---------ALFIN1  --   acatagaacacagaagaatccatggctgcttcttcatcctccgctgcttccttctttggagtccgacaagatgaccaatctcacctcctcccacctaatt  505600             ------>ZmHOX2a(1)            <---------ALFIN1        <---------ZAT2        <---------At4g35610       <---------ATERF1(1)     <---------At4g35610                      ------>NtERF2     --------->At4g35610                   --------->At4g35610     ------>NtERF2                         <---------At4g35610                                 ------    --------->DEAR3(1)                <---------ABI4(2)                                       <------    <---------DEAR3(1)          --------->AtMYB61 <------NtERF2                               -------    --------->RAP2.3(2)         <---------ALFIN1<---------ALFIN1   --------->LBD16        ------->GAMYB   --------->RAP2.3(1)       --------->ANAC46 <---------ATERF1(1)  --------->ZAT14       <---------ATHB12  <---------ATERF1(1)       ------>ZmHOX2a(1) <-----------HVH21   ----------->RAV1(1)    --------->MYB46(3)  --------->LBD16       <---------ALFIN1  --------->DEAR3(1)      --------->DEAR3(1)    ------>MYB83  ------>NtERF2<---------ALFIN1--------->MYB46(3)------>NtERF2   --------->ANAC46       ------>MYB46(1) <---------ALFIN1       --------->AtMYB61<------NtERF2         <---------ALFIN1       --------->AtMYB61 --------->ANAC46    <---------ALFIN1--------->ANAC58      <---------At4g35610       <---------MYB52(2) --------->DEAR3(1)------>ZmHOX2a(1) --------->ANAC58      --------->At4g35610       --------->MYB46(3) ---->ZmHOX2a(1)------>ZmHOX2a(1)   --------->ANAC46  <----------DOF2    ---------->DOF2-------->P   cctccgccgctgctcctcctcctccacctcctcaccaccaggcaccgctgccaccgcttgaagctccaccgcagaaaaagaagagaaaccaaccaagaac  505700                                         --------->ANAC55(2)                                         <---------ANAC55(2)                                       --------->YAB1        <---------AHL20(2)             <---------ICU4     ----------->GT1                --------->YAB1                      <------MYB83 --------->ANAC58                  <---------YAB1                       <------MYB46(1) --------->ANAC58                --------->YAB1         ---------->DOF2 ----------->GT1 --------->ANAC46             <----------DOF2       --------->TOE2(3) <---------WOX13(1)   <--------- --->GLK1(1)               --------->ARR11(3)  <---------ICU4       --------->ATHB12       <---------DAG2 ---ARR11(3)              <---------CCA1(2)   <---------YAB1--------->ARR11(3)  ----------->GT1     - -->ARR11(3)<-----------GT1<---------ARR11(1) --------->ICU4<---------ARR11(3)---------->DOF2   <----   tccaagtaagttaattacctcttaattcaaatcttttataatcatgtgatcatttcttaaaagaacttattgattggtgaaaaagataaatcccttttcc  505800                                                                           <------MYB46(1)                                                                           <------MYB83                                                                  <---------ANAC58   ------>ZmHOX2a(1)                                              <---------ANAC58   <----------DOF2                            --------->ANAC58    <---------ANAC46 -DOF2   <-----------GT1           <---------ARR11(3)            --------->STY1(2)                 <- --------->ID1        <-----------GT1         --------->ANAC58   <---------ZAT2                  ---- -----AtLEC2       <----------DOF2 --------->ARR11(3)            <---------STY1(2)           --------   atgtccttttttttcttctcccttttacattttttaaaatcttgaaataagcaaattagcaaaccctagcttgtagttggtttttcaaaattcagatttc  505900                                                         --------->ATHB12                                                        <---------YAB1                                                 <-----------GT1              --------->ANAC46               <---------ICU4              --------->ANAC58               <---------AHL20(1)                      <----------DOF2              --------->AtLEC2               --------->YAB1                   <---------ZAT6     <-----------GT1                         <--------ATHB1              --------->LBD16    <---------AHL20(2)                       <---------AHL20(2)     <---------At4g35610 --------ATHB12                              --------->AHL20(2) --------->GLK1(2)    <---------DAG2 ----->WOX13(1)            <----------DOF2  --------->ICU4     <---------GLK1(2)   XXXXXXXXXXXXXXXXXX ->GLK1(1)    --------->ANAC58        ----------->GT1------>ZmHOX2a(1) <---------LBD16        -------   aatcaatttatcttccatgcaatataagacttttaaaatttagttaataattttcctcttgattagattccgatgcggaagtgatagctttatctccaaa  506000  Previous    Next  AGI:  At2g02070.1    Description:  ATIDD5 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 5); nucleic acid binding / transcription factor/ zinc ion binding. similar to ATIDD4 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 4), transcription factor [Arabidopsis thaliana] (TAIR:AT2G02080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46710.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 505486    to: 509424    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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