Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    =============================================MYC_MYB                              --------->ANAC58                              --------->ANAC58                            <---------ALFIN1                                  <---------ANAC46                           ------>ZmHOX2a(1)                                 <---------LBD16  ----------->GT1        ------>ZmHOX2a(2)    <-----------GT1           <------MYB83  --------->TOE2(3) ---->TEIL           --------->WRKY12  <---------ANAC46             <---------HSFB2a(1)             - -----ZAT14        <-------GAMYB  --------->TGA1a       --------->CCA1(2)  <---------GLK1(1)    <---- ---->ZAT14        =========================MYC_MYB  --------->ANAC58   <------MYB46(1)        <----- -----ZAT18    <---------At4g35610<---------TGA1a    --------->ANAC58 <--------P    --------->GLK1(2)   cacttggtaactacttgagctcgttgatcctcacgctcgtgacttattttacaacaagaaatgggcaagaaggttggatttcggataatctcaattcagg  489600                                                                                --------->ANAC46                                                                   <---------At4g35610                                                                   <---------ZAT2             <------                                                                   --------->ZAT2   ---------->DOF2                                                     <----------DOF2            --------->ANAC58                            <------MYB46(1)         <-------GAMYB  --------->At4g35610     <---------HSFB2a(1)                            <------MYB83           <---------MYB46(3)           --------->ANAC58 -------->At4g35610       <---------ANAC58        <---------RAP2.6(2)     <------MYB46(1)  --------->HSFC1(2) -------HVH21             <---------ANAC58        <---------DEAR3(1)      <------MYB83     <---------HSFC1(2) ----At4g35610----------->RAV1(2)                 <---------ANAC46<-----------RAV1(1)   ---------->DOF2   tcatctcgattacttcttctggctcttggctggtcttagccttgtgaacatggcggtttacttcttctctgctgctaggtataagcaaaagaaagcttcg  489700                                                                                               <-----                                                                                               <-----                                                                                             ------->TEIL                                                                                           --------->ZAT14                                                              ------->GAMYB                <---------ZAT14                          --------->YAB1                     <------------AtMYB77        ------------           <---------MYB52(1)        ---------->DOF2     --------->At5g28300 --------->YAB1<---------ZAT18 -TEIL    <-------GAMYB<----------DOF2       ---------->ID1  <------------MYB.PH3(1)    <---------ANAC46   tcgtagtaatgctgttatctatctactttcattacatacaaaagtttgtttctttcaactgtaactgtctctgtatcaataacaacattgctgtgtactt  489800 <----------DOF2                         <-----------GT1                   <------------CBF ----DAG2                            --------->YAB1              <------------CBF -----DOF2                          <---------YAB1            <---------------AGL15           ------- --->AtSPL8                        --------->AHL20(2)         --------------->AGL15       -----------   ttcctttcaatttcaaaagtttaagtcgcatttgcaatattataaacaattcagggttcgaatactaaattgagagaaattgtccataggcttagtaaat  489900                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                                                                 *TSS                                                           --------->LBD16                                                          <---------ANAC46                                                          <---------ANAC55(1)                                                          <---------ANAC58                                                          <---------ANAC58                                                     --------->KAN4(1)                                                     --------->HSFB2a(1)                                                     <---------HSFC1(2)                                                     --------->HSFC1(2)                                                     <---------KAN4(1)                                                     <---------HSFB2a(1)                                   ----------->HVH21<---------KAN4(2)           ---------->ID1 --------->ZAT18--------->LBD16 <---------LBD16 -->WOX13(1)    <---------CCA1(2)<---------ICU4 >>>>>>>>>TBF1 ------------>CBF  >>>>>>>>>TBF1 >GT1 <----------DOF2--------->MYB52(1)<---------LBD16--------->KAN4(2)      >>>>>>>>>TBF1 <---------ARR14(2)   caaatgggcttttggcccatatcaaacgggcacaaatatgacccggagaagaagaatgttccgggtcaataaaatcgaagaagaagaagagagtatcgtt  490000                                                         ------->GAMYB                       <-------                          <---------ARR14(2)            --------->ANAC46                     <-------             <---------HSFB2a(2)  <-------TEIL          --------->ANAC58                     --------            ------>ZmHOX2a(2) <---------TOE1(2)         --------->ANAC58    --------->At4g35610          <---------ARR14(2)  --------->LBD16      --------->ANAC58         <---------At4g35610------          --------->ARR14(2) <-----------RAV1(2)   ------>ZmHOX2a(2)     <---------At4g35610 --------      <---------LBD16     --------->ARR14(2)       --------->ANAC58      --------->At4g35610<--------   --------->ALFIN1     <---------MYB46(3)     <---------YAB1      <-----------------------TaNAC69(2)   gtgaggtttggggatcgcgaaaatggaggttccaggttcatcgaagaagatgatcgcaacgcaagaagagatgtctgcagctaaaatagcacttggatct  490100                                          <-----------RAV1(2)                                         <---------MYB52(1)       <---------ZAT18                  <-----------HVH21       --------->ZAT18                  <-----------TGA1  --------->CCA1(2)                    --------->TGA2(1) --------->ARR11(3)                    <---------bZIP60(1) <---------ARR11(3)                    --------->bZIP60(1)         <---------GLK1(1) --AGP1--------->ZAT14                 --------->ETT(2)        --------->AtLEC2 --ARR14(2)                --------->ANAC46                  <---------AtLEC2                      -- ->ARR14(2)               <---------At4g35610              ------>MYB83                     <-------- >ZmHOX2a(2)              --------->At4g35610              ------>MYB46(1)            <---------ANAC46 ->ARR11(3)   <---------CCA1(2)        <---------ETT(2)  <---------------AGL15        <---------ANAC55(2) -CCA1(2)<---------At4g35610    --------->MYB46(3)    <-----------GT1             <-----------HVH21--   agagatatgtgcgctcatctcttgattccgctcaacaaatgtcgtcaggctgagttttaccttccatggaaatgtgaagacgagcgtcacgtttatgaga  490200                                                      >>>>>>>>>TBF1                                                  --------->REM1(2)                                                --------->LBD16                                               <---------ANAC58                                               <---------ANAC55(2)                                               <---------ANAC58                                               <---------ANAC46                                               <---------ANAC55(1)                                              ------>ZmHOX2a(2)                                              <-------TEIL <---------HSFC1(2)                                            <---------ARR14(2)                                            --------->ARR14(2)                                 <-----                                            <---------ARR11(3)                                 ------           <---------ANAC58                <---------HSFB2a(1)                                 <-----    --------->ARR14(2)                     <---------GLK1(1) <----------DOF2            --------->ARR14(2)    <---------ARR14(2)                    ----------->ARR10--------->HSFC1(2)           <---------ARR14(2) --------->GT1               <---------ANAC58--------->CCA1(2)                       --------->ANAC58 -YAB1     <---------ANAC58  <---------ANAC58<------ZmHOX2a(2)                       --------->ANAC58 ------->ALFIN1             --------->ATHB12--------->ARR11(3)         --------->YAB1--------->ANAC46   agtgtgaatacgagcttgttatggagagaatgcttgcgatgaagaagatccgtgaagaagaagctttggctaaacagaataaactacaaggaaacgctgc  490300                                                                       <--------P                                                                       <---------MYB52(1)                                                                      <---------MYB52(1)                                                                     --------->LBD16                                                                    <---------ANAC46                                                                   <---------LBD16                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                <---------ARR14(2)               --------->GLK1(2)   ------>ZmHOX2a(1)            --------->ARR14(2)              <---------GLK1(2)            <------- ----At4g35610                 <------ZmHOX2a(1)                --------->ARR14(2)           <------- --->At4g35610               <---------TOE2(3)                  <---------ARR14(2)           <------- ----ZAT2               --------->ICU4                   <---------ARR14(2)          <-----------GT1   tgttcctcttatccctaaaactgctaatgcttaggattcgattccttctccaatttgccgattccagattccggttagtctatagtttttcgatttcttg  490400                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                --------->ARR14(3)                                                <-----------ARR10                                                --------->AGP1                                                <---------ARR14(3)                                                --------->ARR11(3)                                                <---------ARR14(2)       --------->ATHB12                         --------->ARR14(2)     <--------P                                 <---------ARR11(3)                --------->ATHB12     <---------WOX13(1)                         <---------GLK1(2)           <---------TOE2(3)    <-------GAMYB                              <---------CCA1(2)            <---------TOE1(3)   <---------MYB46(3)                  --------->REM1(1)            ----------------->AG  <---------AtMYB61                --------->At4g35610              <-----------------AG --ANAC46     <---------WOX13(1)   <---------At4g35610              <-----------------AGL2 --ANAC58   --------->ATHB12    <---------At4g35610  <---------ANAC46--------------->AGL15 --ANAC58  <---------YAB1--------->MYB52(2)   ----------->ARR10     ----------------->AGL3   tgttttggttgatttgattgaattggtttgtttcttctgctacatgatcagatcttcgtgttcttcaaattccaaattagggtttcattgggaataaatg  490500  Previous    Next  AGI:  At2g02040.1    Description:  ATPTR2-B (NITRATE TRANSPORTER 1); transporter. Identical to Peptide transporter PTR2 (PTR2) [Arabidopsis Thaliana] (GB:P46032); similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT3G54140.1); similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT1G62200.1); similar to proton-dependent oligopeptide transport (POT) family protein [Arabidopsis thaliana] (TAIR:AT2G02020.1); similar to LeOPT1 [Lycopersicon esculentum] (GB:AAD01600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42444.1); similar to peptide transporter 1 [Vicia faba] Range:  from: 487422    to: 489831    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g02050.1    Description:  NADH-ubiquinone oxidoreductase B18 subunit, putative. similar to hypothetical protein [Vitis vinifera] (GB:CAN63291.1); contains InterPro domain NADH-ubiquinone oxidoreductase B18 subunit; (InterPro:IPR008698) Range:  from: 489965    to: 491994    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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