Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <----------DOF2                                        --------->AHL20(2)                             ------>ZmHOX2a(2)                                    <---------YAB1                                    <------ZmHOX2a(2)          --------->At4g35610       <---------TOE1(3)                                <---------ARR11(3)      --------->ARR14(2)            <---------TOE2(3)                                --------->ARR11(3)      <---------ARR14(2)       <---------At4g35610                                   <---------ARR11(1)      --------->GLK1(2)        --------->At4g35610                                   <---------ARR14(2)      ------->TEIL       <---------AHL20(2)         <-----------GT1                  --------->ARR14(2) ---->ANAC55(2)         <---------AHL20(1)          --------->RVE1(1)               <---------ARR14(1) ----TOE2(2)            --------->ARR11(3)      --------->AHL20(2)                  <---------CCA1(2) ----TOE1(2)            --------->AHL20(1)    ----------->GT1                 <---------YAB1 ----TOE2(3)            <---------ARR11(3)  ---------->DOF2     ----------->GT1  <---------LBD16   gtatttcgaatctgatgaaaaattgatatatttagcttaagattaaaaaagaaaatacctcttatatagtaacacacattatgctcggatctttcagtgc  471700                                                                  <---------ANAC46                                                      <---------LBD16                          <-----                                                    <---------ARR14(2)                         <-----                 --------->GLK1(2)                  --------->GLK1(2)              <---------AHL20(2)            <---------MYB52(1)                   --------->AHL20(2)            --------->AHL20(2)           --------->TOE2(3)                     <---------AHL20(2)            <---------AHL20(2)          <---------ANAC58             --------->ANAC58<---------HSFB2a(2)   --------->YAB1   -------          <---------ANAC58             --------->ANAC58--------->HSFB2a(2)<---------AHL20(2)  ------- <---------MYB46(3)         <----------DOF2     --------->AHL20(2)----------->GT1  <---------ICU4 ----------->GT1<---------GLK1(2)     ------->TEIL  --------->ARR11(3) ----------->GT1      ---------   aagtggttaatttcgttagaatctagtattctttcttatgtacccaaaaattaaaatctggaactatatcgtatattaaaaataaatatttctgtaataa  471800                                                                                     <---------AHL20(2)    ------->TEIL          <---------ARR14(2)                                        <---------AHL20(1) ----ICU4                 --------->ARR14(2)                     <---------ATHB12   --------->AHL20(2) ----AHL20(2)            <---------CCA1(2)                   <---------YAB1         --------->AHL20(1) -->AHL20(2)         <---------ANAC46                      <-----------GT1--------->AHL20(2) -->ICU4          --------->GLK1(2)            <---------HSFB2a(2)      --------->TOE2(3) >YAB1       --------->YAB1                    --------->HSFB2a(2)--------->YAB1    <---------AHL20(2)   atattgaatctagaatcaagatgctgtgtatcgtcgtctaggctaagttttagaactctagttaccaatgaaaacattaaacaaaataaaattgtgtttc  471900                      <---------ANAC58                      <---------ANAC58                                   --------->At4g35610                      <---------ANAC46                                   <---------ZAT2                     <---------LBD16--------->ANAC58                     <---------At4g35610         <---------MYB52(1)         --------->ANAC58             <---------ARR14(2)       <---------ANAC58      --------->MYB52(1)<---------AtLEC2  --------->ARR14(2)       <---------ANAC58--------->LBD16   --------->DAG2    --------->YAB1--------->ZAT2     <---------At5g28300------>NtERF2   ---------->DOF2    --------->ATHB12            <-----------GT1   aacttcttaccgtgagatagagttgcggacataacgggaagcaaaagttgaatggattgaatcatcggatttggaagctgtcttagataaaaccatcttc  472000                       <----------ID1                       ----------->GT1                   ---------->DOF2               --------->DAG2                                        *TSS                     <------              ---------->DOF2                                  ----------->GT1            -----------         ---------->DOF2             --------->ICU4        --------->YAB1         <------ZmHOX2a(1)      --------->At4g35610        --------->ZAT18           --------->AHL20(2)   --------->ALFIN1   ttgaaatgagctaaagaaaagtaaagggaaaaatgtgcaatgtttttgttttgtagttgaataatatgtgaaattagaagaagaggagcaaatggtatat  472100                                                           <---------TOE2(3)                                             <---------HSFB2a(1)                                             --------->HSFC1(2)                                             <---------HSFC1(2)                                             --------->HSFB2a(1)    <-----------TBP                                            --------->ANAC58       <----------DOF2                                      ---------->DOF2      <---------TOE1(3)<----------DOF2                                  --------->O2         <----------DOF2      <---------DAG2 <----------ID1                   <---------ANAC46  <---------TOE1(2)    <-----------GT1 -----TBP                         <---------O2      <---------TOE2(2) --------->YAB1 <---------YAB1 >GT1                 <---------MYB52(1)    --------->ANAC58 <------ZmHOX2a(1)  <-----------GT1   atagggacgagaatggttctcttcgttttgtttgcaacgtgaaaggaagcatcgctggtttaaggattccttttataactttttactatcatttagttta  472200                                                                             --------->AHL20(2)                       --------->TOE2(3)                          --------->TOE2(3)            <---------AHL20(2)                                    <----------DOF2            <---------ATHB51                           <---------ATHB51      <---------AHL20(2)         --------->AHL20(2)        --------->AHL20(2)  <---------AHL20(2)   --------->AHL20(1)         <---------AHL20(2)       <---------AHL20(2)--------->AHL20(1)      <---------AHL20(1)         --------->AHL20(1)      --------->AHL20(2) <---------AHL20(1)      --------->AHL20(2)         <---------AHL20(1)  <---------AHL20(2)     <---------AHL20(2)      <---------AHL20(2)      x        --------->AHL20(2)   --------->AHL20(2)     --------->AHL20(2)  <---------AHL20(1)      <----        <---------AHL20(2)   <---------AHL20(1)    <---------ATHB12     <---------AHL20(2)     <xxxxx  ----------->GT1      <----------DOF2             --------->AHL20(2)   --------->AHL20(2)    -------   aaaatagtaaataaattatgggctactttaaaaaatttaaaatagtaagaccaataaattatgggctactttaaaaaatttaattttcaaaacgaatcat  472300                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                           --------->LBD16                                                                          --------->ANAC46                                                                          --------->ANAC58                                                                          --------->ANAC58                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            <---------MYB52(1)                        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           xxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->At4g35610            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  <xxxxxxxxxxxxxxxxsmallRNA(i)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             <xxxxxxxxxxxxxxxxsmallRNA(s)          xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)               <xxxxxxxxxxxxxxxxsmallRNA(i)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                xxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                 <---------MYB52(1) ------->GAMYB --------->TOE2(3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<----------DOF2 -----CCA1(2)        <----------DOF2               ---------->ID1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxxxx   atcatttagtttgctatgtgtctcttttcccttattctcactctctcttatttttcgttaagacggactgcttaacccgctattctaaacctttattttc  472400                                                                                                 ----      <----------DOF2                                                                      ----------     <---------YAB1                                                                     --------->GLK1(2)   <-----------GT1                            --------->AHL20(1)                   --------->ANAC46 xsmallRNA(le3)                               --------->ARR11(3)                   --------->ANAC58 xxsmallRNA(si3)    <---------GLK1(1)         <---------ARR11(3)                 ---------->DOF2 <--- xxsmallRNA(le3)    --------->GLK1(1)        --------->AHL20(2)     --------->ZAT6 --------->ANAC58   taaaattacttttgtataactgaaatctgaaaaatacaaaatactaaatatatacaaaaaaacacctaaaacactattttcttcaaagcaattctgtaat  472500                              <-----------GT1                          <---------YAB1                         <---------AHL20(1)                         <---------AHL20(2)                       <---------YAB1                     <---------ICU4                    --------->ICU4                                                             ------              <---------AHL20(2)                                                               <-----    <----------DOF2--------->ANAC55(2)                                         <-----------GT1------- ----->AHL20(2)    <---------ANAC55(2)            ----------->GT1            --------->AHL20(2)<----- ->GT1       --------->AHL20(2)               <------ZmHOX2a(1)           --------->WOX13(1)  ------- ------AHL20(2)   <---------ICU4  ------>ZmHOX2a(1)                 ------->TEIL       <----------DOF2   taaatactttgtgtatttaatacttattattttttcctatcaactcgaggagaggtgaagaaaccatatgtattttcaattaaaccatacttttgtttgg  472600  Previous    Next  AGI:  At2g02000.1    Description:  GAD3 (GLUTAMATE DECARBOXYLASE 3); calmodulin binding. similar to GAD (Glutamate decarboxylase 1), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G17330.1); similar to GAD4 (GLUTAMATE DECARBOXYLASE 4), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G02010.1); similar to GAD2 (GLUTAMATE DECARBOXYLASE 2) [Arabidopsis thaliana] (TAIR:AT1G65960.2); similar to glutamate decarboxylase 4b [Brassica juncea] (GB:AAS79671.1); similar to glutamate decarboxylase 4a [Brassica juncea] (GB:AAS79670.1); similar to glutamate decarboxylase isozyme 1 [Nicotiana tabacum] (GB:AAC24195.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, Range:  from: 469369    to: 472069    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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