Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <----------DOF2                                                                                <---------------AGL15                                                                                --------------->AGL15                         --------->YAB1                                        <-----------------AGL2                        <---------ATHB12                                       ----------------->AGL1                     <---------AHL20(2)                                        <-----------------AGL1                    <---------AHL20(2)                                         <-----------------AG -------->RAV1(1)   --------->AHL20(2)                                         ----------------->AG -------AtSPL8   --------->WOX13(1)                          ------>MYB46(1)  ---------->ID1 >DAG2   <---------ARR11(3)                                  ------>MYB83  <----------DOF2 >DOF2   --------->ARR11(3)     >>>>>>>>>>GT-3b ----------->GT1         <-----------GT1<----------ID1   caacagtaagaggtcttatcaattaaatcataagaaaaatatgtcccaaaatgtcaaaaaaccaactacgaatatttcttttccttttaaggccaaacca  456600                                              <---------ZAT18                                              --------->ZAT18                                          --------------->AtSPL8                                          <---------------AtSPL8                                    <---------AHL20(1)                       <---------ARR11(3)                                    --------->AHL20(2)                       <---------ARR14(2)           <---------ICU4           <---------AHL20(2)                       --------->ARR11(3)          --------->ICU4            --------->AHL20(1)            <---------YAB1 --------->TOE2(3)         --------->ANAC55(2)       <---------ATHB12               <---------AHL20(2)         <---------ANAC55(2)       --------->AHL20(2) ---------->DOF2        --------->ARR14(2)   ggttttggaatacttattacaaataaactcaatttcaataaattcttgtacacaaattaagcactaatttcattgtgaagataccatagtcacattcaca  456700                                                                     <---------AHL20(1)                                                     <---------YAB1  --------->AHL20(2)                                                    <---------AHL20(2)                                                    <---------AHL20(1)<---------YAB1                                                  <---------AHL20(2) <---------AHL20(2)                                              <---------AHL20(2)     --------->AHL20(1)                                              --------->AHL20(2)    --------->AHL20(2)                                          <---------YAB1           <---------YAB1                                         <---------AHL20(1)      --------->YAB1        <-------------                                         <---------AHL20(2)      <---------ICU4        <-------------                                         --------->AHL20(1)      <--------HAHB4    <---------AHL20(2)                 --------->AHL20(2) --------->AHL20(2)          <---------YAB1  --------->AHL20(2)          --------->WOX13(1)        <---------ARR11(3)          --------->ICU4  <---------AHL20(2)      --------->bZIP60(1)           --------->AHL20(1)        --------->YAB1   --------->AHL20(2)      <---------bZIP60(1)           <---------AHL20(1) <---------AHL20(2)     <---------MYB52(1)   tctatatgacatcaatctataaaatccaaaacaaactatatattatatttatattatttttttgtcatcattatatttccattaatttatctaattctgg  456800                                                        ----------->GT1                                               <---------At4g35610                                               --------->At4g35610                                               <-------GAMYB                                               <------NtERF2                                              <---------DEAR3(2)                                             <---------DEAR3(1)                   <---------YAB1                      --------->AHL20(2)     <---------RAP2.6(2)  <---------AHL20(1)          -------                    --------->AHL20(2)      <---------ORA47(1)    --------->AHL20(1)         <------- ----AGL3       ----------->GT1            <-----------HVH21      --------->ARR11(3)   <---------TOE2(3) ----AGL2    <-----------HVH21           <---------AtMYB61       --------->AHL20(2)--------->YAB1   ttctaatatactcttggtcagaaaaaatataaacattgaagaattggtcggctgaaaattgtgaaaaatatatagcagaaaaatatgataatgttatcat  456900                                                   <-------MYC4                                                   ------->MYC4                                 --------->ZAT6    <-------MYC3                               <-----------GT1     <-------MYC2                             <---------AHL20(2)    ------->MYC2                   --------->AHL20(2)              ------->MYC3                   <---------AHL20(2)             --------->O2                  <---------AHL20(2)              --------->TGA1a                  <---------AHL20(1)              <---------O2                  --------->AHL20(2)              <---------TGA1a                               -----                  --------->AHL20(1) <---------ZAT14                                            <----      <---------AHL20(2)     --------->AHL20(2)   ==============================================bZIP_DOF      --------->AHL20(2)<---------AHL20(2)        --------->ANAC55(2)                     <---------At4g35610     --------->AHL20(2)--------->YAB1--------->ZAT14     ------->TEIL                 <-----------HVH21 -->YAB1  --------->YAB1--------->AHL20(2)     <---------REM1(2)                     <----------DOF2< --YAB1   ----------->GT1<---------AHL20(2)  --------->ZAT14                  <-----------GT1  ------   aaacaaaattaatagtaaaatttaattttaatttaacactacagtactatacacgtgtgtatgtatagctctataagtatttactctctttcagctattt  457000                                                    <---------ARR11(3)                                                    --------->ARR11(3)                                                    --------->AHL20(1)                                                   --------->CCA1(2)                                          <---------ANAC58         *TSS                             <---------ANAC46        <---------ZAT14                   <---------ANAC58                                   <-------        --------->ZAT14              <---------REM1(1)                                       <------- ---->AHL20(2)                       <---------MYB46(3)       <---------AHL20(2)             <------- -----AHL20(2)                ------>ZmHOX2a(1)   --------->ARR11(3)                ----------->HVH21 ---------AHL20(2)      <<<<<<<<<TBF1<-----------RAV1(1)      --------->AHL20(1)   ------>NtERF2 --->AHL20(2)        <<<<<<<<<TBF1<-----------RAV1(1)         --------->AHL20(2)  --------->ANAC46   attttttcagtgaacgagcattcttcttcttcctctgtgttgttgcttcttagatatattcaaataaaatgacgactgtaatcgacgcgacgatggcgta  457100                                                                     --------->ANAC46                                                                     <---------DEAR3(1)                      <-------TEIL                                   --------->DEAR3(1)                    <---------ARR14(2)                              --------->ATERF1(1)     <---------HSFB2a(2)                                           <---------ATERF1(1)     --------->HSFB2a(2) ---------->ID1                           --------->ETT(2)    <---------LBD16 <---------GLK1(2)                             <---------ETT(2) <---------GLK1(1)  --------->ARR14(2)  <<<<<<<<<TBF1           <-----------HVH21 --ANAC58     ----------->HVH21      <<<<<<<<<TBF1    --------->GLK1(2)   <---------MYB52(1) --ANAC58    --------->DEAR3(2)   <<<<<<<<<TBF1       <-----------ARR10<------NtERF2 --ANAC46 <------ZmHOX2a(1)    <<<<<<<<<TBF1         <---------GLK1(2)------>NtERF2   tagatttctggaggaagcgaccgattcgtcttcttcttcttcttcttccaaactagaatctagccctgtcgacgccgttctcttcgtcggaatgtctctg  457200                        <---------ANAC58                                            --------->GLK1(1)                        <---------ANAC58                                            <---------GLK1(1)                     <-------PIF5                                                  --------->ARR11(3)                     ------->PIF5                                                  <---------AGP1              <---------HSFB2a(2)                  <-----------HVH21              <---------CCA1(2)              --------->HSFB2a(2)                 <-----------RAV1(1)   --------->GLK1(1)           <----------DOF2                     --------->ZAT6          --------->ARR14(2)           <          <---------ANAC46                  ------>ZmHOX2a(1)          <---------ARR14(2)           <          <---------ANAC58                 <---------ANAC58       <---------DOF5.7(2)------>ZmHOX2a(2)          <---------ANAC58 <---------ANAC46<---------ANAC58     --------->DOF5.7(2)<---------ARR11(3)   gtactcggtattgcttctaggcacttgcttcgtggaactagggttccttacactgtcgctcttctcgttatcggaattgctcttggatctctcggttcga  457300                                                                                               ------                                                                                               ------                                                                                               <-----                                                          <---------YAB1                      <------                                                        --------->YAB1              <------MYB83                                                       <---------ATHB12             <---------ANAC58                                                       --------->ICU4               <---------ANAC58                                                  --------->ANAC46                  <---------ANAC46                                                <---------DOF5.7(2)                 <------MYB46(1)     <---------AtLEC2                          <---------WRKY45                    <---------AtMYB61     <---------ANAC46      <---------At4g35610 <---------WRKY12  <---------WOX13(1)--------->MYB111(1) ---------ANAC58   --------->GLK1(1)           <---------WRKY38(1)                 --------->MYB46(2) ---------ANAC58<---------YAB1         --------->TOE2(3)<---------ICU4             <---------MYB46(3)   tttcgttccatggaatttctgatttcttcatctgttttaatccttgaagtcaacgtaatcatgcttaattgctaattcatgttgtttggtgtttcagaat  457400                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)                       --------->ARR14(2)                       --------->ARR11(3)                       <---------ARR14(2)                   ---------->DOF2              --------->TOE2(3)               <---------MYB52(1)        --------->YAB1 <---------ARR11(3)<---------ARR14(2)  --------->At4g35610<---------HSFB2a(1) <---------ARR11(1)                             <----------DOF2  <---------At4g35610----------->ARR10   --------->ARR14(2)                            <---------ANAC58 --->GLK1(2)  --------->TOE1(2)          ------->TEIL                                  <---------ANAC58 --->ARR14(2) --------->TOE2(2)         <---------CCA1(2)                          <---------ANAC58 ----ARR14(2) --------------------->WRI1<---------ARR14(1)                    <---------AtLEC2 ---GLK1(2)   --------->TOE1(3)    <---------GLK1(1)               <-----------GT1 <---------ANAC58   atggagctaaacataaccttggaaagatcggccatggaattcgtatctgtaagtttttagtttcgaatttttcttctcttccatggctggctttgtaaga  457500  Previous    Next  AGI:  At2g01980.1    Description:  SOS1 (SALT OVERLY SENSITIVE 1); sodium:hydrogen antiporter. Identical to Sodium/hydrogen exchanger 7 (NHX7) [Arabidopsis Thaliana] (GB:Q9LKW9;GB:Q9ZPS6); similar to ATNHX8 (Arabidopsis thaliana Na+/H+ exchanger 8), lithium:hydrogen antiporter/ sodium ion transmembrane transporter/ sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT1G14660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42437.1); similar to salt-overly-sensitive 1 [Thellungiella halophila] (GB:ABN04857.1); similar to Na+/H+ antiporter [Populus euphratica] (GB:ABF60872.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153); contains Range:  from: 457009    to: 463325    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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