Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ZAT14                                              ---------->DOF2                                <-------TEIL                                              <---------ZAT14                               <--------                                          --------->ZAT6                                 ----------->GT1     <---------ARR11(3)          <------ZmHOX2a(2)                                     ---------->DOF2 --ANAC46                      <------ZmHOX2a(1)                                   --------->AtLEC2   gagacaacatctaaattctaatataaaacaataggatcaaagtatcactaaagtgagttttgatatagtggtgttctctaaattcttgcaaaagttacat  425300                                                                                            ---------                                                                                       ---------->DOF2                                    <------ZmHOX2a(1)                           ----------->GT1                                  ----------->GT1                              <---------TOE2(3)  <--                                 --------->CCA1(2)                    --------->MYB46(3)<---------TOE2(3)                    <------ZmHOX2a(1)                                ------->TEIL     --------->AHL20(2) ---GT1     <---------YAB1    <---------TOE2(3) ------->TEIL      <---------ATHB12    <---------AHL20(2)   tctctagtttgattttcatttaggagactattgagataggaaaatgtatggacctccaaaactattcaatgaaccacaaataatgtaattaaagtaaaga  425400                                 <----------DOF2     --------->At4g35610                                <---------ANAC46     <---------ZAT2                                <---------ANAC58     --------->ZAT2                                <---------ANAC58     <---------At4g35610                               <---------ZAT18       <---------GLK1(1)                           --------->ANAC46          --------->GLK1(1)                           <---------DEAR3(1) --------->ALFIN1                          <---------LBD16   <---------ZAT2                   <------NtERF2                         <---------ALFIN1   --------->At4g35610             --------->RAP2.6(2)    ----------->GT1   --------->ARR14(2)  <-----------RAV1(2)  ----------->GT1        --------->At4g35610 ->DOF2     ----------->RAV1(2)<-------TEIL --------->ZAT2--------->LBD16 <---------At4g35610 -------MYB59--------->TOE1(3) --------->ABI4(2)   <------ZmHOX2a(1)      --------->At4g35610   cataactagtttaaacctgagcaagttccacggtgcgttcaggctcaggtggaggagctccgaagttgaaaaaatcagcggcattcgcagaagaagagcg  425500                                 ------->TEIL                               --------->ZAT18                                     ---------->DOF2                               <---------ZAT14                             ------->TEIL                               <---------ZAT18                      --------->HSFB2a(2)                              <---------ZAT6   --------->At4g35610  --------->HSFC1(1)          >>>>>>>>>TBF1      --------------->AtSPL8                 <---------HSFB2a(2)            --    <------ZmHOX2a(2)        <---------------AtSPL8                 <---------HSFC1(1)             <-   tttgcgatcgaagaagaacagttgagggattagtgtacctgaaattgtgagcaaaacgtctcttcgtcttctagatgtatcaatagaaagtgctaagttt  425600                                                            <----------DOF2                                                           <---------ANAC46                                                           <---------ANAC58                                                           <---------ANAC58                                                          <------NtERF2                                                        <---------RAP2.6(2)                                ---------->DOF2       <---------MYB46(3)                              <---------YAB1         <---------AtMYB61                         --------->ATHB12            <---------DEAR3(1)                        <---------YAB1            <---------AtMYB61                      --------->YAB1              --------->ALFIN1        ------->TEIL--------->GLK1(2)             <---------ZAT6                         <---------ATHB12 ------->ARR14(2)   --------->ARR11(3)----------->GT1--------->ALFIN1            --------->ANAC55(2) --------ARR14(2)  <---------GLK1(2)---------->DOF2<---------MYB46(3)          <-----------GT1 ------   gaatccgatgtatcaattgaagaatcttgattgtgaaagaaagtgaaatgtagtggtggtggctttgaaatcgccatgtattcacgtttcaatgaaacaa  425700                                                                                <-----------HVH21                                                                              -------->ABF1                                                                              <-------MYC3                                                                              <-------MYC2                                                                              ------->MYC2                                                                              <-------MYC4                                                                              ------->MYC4                                                                              ------->MYC3                                                                             --------->ANAC55(2)                                                                             ========================                      ------>MYB83                                           ========================                      ------>MYB46(1)                                        --------->O2 <---------ZAT18         --------------------->WRI1                                          <---------O2 --------->ZAT14        --------->ATHB12--------->TOE2(3)                             --------->YAB1      --------->ZAT18      ----------->RAV1(1)                                            <---------ZAT6       <---------ZAT14 --------->ZAT2--------->MYB46(3)                           ===========================MYC_MYB <---------At4g35610  -------->P   --------->YAB1           ------->GAMYB    <---------ANAC55(2)  --- --------->At4g35610--------->AtMYB61                      --------->MYB46(3)<---------TGA1a <------- ---->DOF2  *TSS   --------->MYB46(3)                    --------->MYB52(1)  --------->TGA1a --------   agtagctgcaccattgaacaaaccaacctcatcacaaggataagaaccagagattaatccaacggccactagtgataacacgtgtcaactagtgcagata  425800              >>>>>>>>>E2Fc              >>>>>>>>>E2Fd             ------>NtERF2             --------->LBD16           --------->MYB46(3)           <---------MYB55(2)                                                                --------         -------->P   <---------YAB1                                                         --------         --------->MYB52(1)                                                                  --------        ------->GAMYB<-----------GT1                                                         --------       <---------MYB46(2)                                                                    --------       <---------MYB111(2)                                                            <---------ANAC55(2)       --------->MYB46(3)                                                             --------->ANAC55(2)       <---------MYB55(2)                                                             ----------->GT1       <---------MYB52(2)                                                           --------->MYB52(1)       <---------MYB111(1)                                                       --------->ANAC55(2) =================MYC_MYB                                         --------->YAB1<-------TEIL <------- ===============MYC_MYB    <---------AHL20(2)                     ----------->GT1<---------ANAC55(2) ------>ZAT6--------->ANAC46                                  <---------YAB1   --------->CCA1(2)   <- --At4g35610--------->ANAC58                       --------->TOE2(3)          --------->ARR14(2)   -- ->At4g35610--------->ANAC58        <---------MYB46(3)---------->DOF2         <---------ARR14(2) ----   acacttacaactacccgccaaattttcattttttttgtttgttatatgaattatctcaaaggtgctaattgtaatttacagatacataacgtaacacgta  425900 ->ANAC58 ->ANAC46 ->ANAC55(2) ->ANAC55(1)                                                                                        < ->ANAC58                                                                ---------->DOF2          --- --ANAC55(2)------------>CBF                   XXXXXXXXXXXXXXXXXXXX>MIR866-5P             <---------ICU4 --------ARR11(3)   <---------ANAC58           --------->ANAC58    --------->MYB46(3)     --------->YAB1 ------->ARR11(3)   <---------ANAC58           --------->ANAC58 --------->REM1(1)        <---------ATHB12 ------->ARR10      <---------ANAC46     ---------->DOF2   ----------->GT1        <------------CBF---   agatactaaaaactctcaatttgcgttttgacaaaaaatgtttcaaagtaagaaactaattttgttacaacaactaaaagtctaaattgaaatcataacc  426000                                                                                   --------->LBD16               --------->ATHB51                                                   --------->ANAC46               --------->YAB1                                                    <---------LBD16               <--------HAHB4                                                  <---------ARR14(2)              --------->AHL20(2)                     --------->ANAC58          --------->ARR14(2) --------->YAB1<---------ICU4                        --------->ANAC58        <-----------HVH21 ---------ATHB12  <-----------GT1           <-----------TGA1                --------->O2       <----- --->MYB46(1) --------->ICU4   --------->MYB46(3)    ----------->GT1      <---------O2        <------ --->MYB83  --------->YAB1--------->TOE2(3) <-----------HVH21       <---------ANAC46       ----------   aaatcatcttcgtagaataattacaaaacatcaacaactaaaacatcgtcatgagacgaaaaatgaagttgtggagacgcgtctccggagctataaagga  426100                                               <---------YAB1                                           <-------GAMYB                                          <---------MYB46(3)                                          <---------DEAR3(2)                                         <---------DEAR3(1)                                         <---------ANAC46                                        --------->ATERF1(1)                                        <------NtERF2                                       <---------RRTF1(1)                                       ------------>AtMYB77                                       <---------RAP2.6(1)                                       <---------DEAR4(2)                                       ------>NtERF2                                       <---------ATERF1(1)                                       <---------ERF1                                       <---------ORA47(2)                                       <---------RAP2.3(1)                                      <---------RAP2.3(3)                                      <---------RRTF1(3)                                      <---------RAP2.6(2)                                      <---------RRTF1(2)                                      <---------DREB2C(2)                                      <---------RAP2.3(2)                                      --------->DEAR3(1)                                      <---------DEAR3(1)                    <---------ANAC46  <---------ATERF1(2)      --------->ICU4                  ------>NtERF2      <---------ABI4(1)       --------->YAB1                 ----------->HVH21 --------->ANAC46     --------->O2 -ZmHOX2a(1)   --------->DEAR3(1) <---------At5g28300   <---------O2 ----ID1       --------->ANAC46   <---------LBD16---------->DOF2--------->MYB52(1) >DOF2       <---------At5g28300 --------->MYB52(1)  <----------ID1                          <-------TEIL   caaactcagtctcatcaccgcgacggatgaaaaattcacggcggcggttatcaaagcgacgagtcataacgatgtctcaatggacatcgaaaacgttcaa  426200  Previous    Next  AGI:  At2g01918.1    Description:  calcium ion binding. similar to hypothetical protein OsJ_014860 [Oryza sativa (japonica cultivar-group)] (GB:EAZ31377.1); similar to OSJNBb0065J09.4 [Oryza sativa (japonica cultivar-group)] (GB:CAE05708.1); contains InterPro domain Photosystem II oxygen evolving complex protein PsbQ; (InterPro:IPR008797) Range:  from: 424109    to: 425712    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g01920.1    Description:  epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related. Identical to Putative clathrin assembly protein At2g01920 [Arabidopsis Thaliana] (GB:Q9SHV5;GB:Q4PSW4); similar to epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related [Arabidopsis thaliana] (TAIR:AT1G14686.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42419.1); contains InterPro domain Epsin-like, N-terminal (InterPro:IPR013809); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain ANTH; (InterPro:IPR011417) Range:  from: 426051    to: 426989    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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