Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ATHB51                <---------AHL20(1)                <--------ATHB1                   --------->AtLEC2                <---------ICU4                ------->TEIL                --------->AHL20(2)         <---------ANAC55(2)                --------->YAB1             --------->ANAC55(2)                          <---------AHL20(2)               <---------ATHB12           --------------->AtSPL8                     --------->AHL20(1)               <---------ATHB51         --------->ICU4                               <---------AHL20(2)               --------->ICU4         <--------HAHB4                                 <---------AHL20(1)             --------->YAB1           --------->YAB1                                --------->AHL20(2)            <---------YAB1            <---------ICU4              --------->AHL20(2)--------->YAB1        <-------GAMYB                 --------->ATHB51       ------>MYB83     --------->YAB1    <----       ------>ZmHOX2a(2)             --------->ICU4          ------>MYB46(1) <---------YAB1     -----       ----------->GT1             --------->TOE2(3)        ----------->RAV1(1)     <---------AHL20(2)   aaaattggatcgttacaataattttgttttcgctaatccataattatgtacttgcaaaataccaacaaaaaattcgcttatgaaaattatatttttagtg  409900                                                                                                  ---                                                                                                 <---                                                                                   --------->ARR11(3)         <---------ARR11(3)                                                        <-----------ARR10         --------->ARR11(3)                                                        <---------ARR11(3)        --------->YAB1                                                            --------->RVE1(1)       <---------TOE2(3)                                                          --------->CCA1(1) <---------CCA1(2)     --------->YAB1                                       --------->AHL20(2)   ---- -----ZAT18         --------->YAB1             --------------->AtSPL8      --------->AHL20(2)  ------ ---->ZAT18   --------->YAB1  <---------ARR11(3)             <---------------------WRI1  <---------ATHB12   gacatatctaagataatcagaaaaataatcaatttcttcaaacacaaatactgtacatctaaatgggaaacatacaaataaaaaatatctaatcagccaa  410000                                                                       <----------DOF2                                                                      ------>ZmHOX2a(2)                                                                    <---------AGP1                                                                    --------->ARR11(3)                                                                    --------->ARR14(2)                                                                    <---------ARR11(3)                                                                    ------->TEIL                                                          --------->AHL20(2)     ---------->DOF2                                     --------->AHL20(2)    <---------ATHB12                        --------->ARR11(3)      <---------ARR14(2) ------>YAB1----------->HVH21               <---------ARR11(3)<---------AHL20(2) ------ATHB12                              --------->CCA1(1) --------->AHL20(2)   ----------->GT1 ----->MYB46(3)                            --------->RVE1(1) <---------AHL20(2)  ----------->GT1  <-- --->WOX13(1)                   <---------------AtSPL8   <---------ATHB12      ---------->DOF2  -----   tcaccaataaagaagtgactcgttgtcaaaaattagggaacaaaaatatctcattaccaataaataaatggatctttgtaagaaagttaaaaaaaaaaaa  410100                                                                       --------->AHL20(2)                                                                ----------->GT1                                                            --------->AHL20(1)                                                            --------->AHL20(2)       ----------------                                                            <---------AHL20(2) --------->AtLEC2                                                           --------->AHL20(2)<---------ANAC58        ------->TEIL                <---------AHL20(2)     <---------AHL20(2)<---------ANAC58     <---------ATHB12--------->ANAC46              --------->AHL20(2) <---------AHL20(2)<----------ID1 --------ID1  --------->HSFB2a(1)   --------->AHL20(2)  --------->AHL20(2) <-----------GT1  --------- ----->DOF2  <---------TOE1(2)     --------->AHL20(2)  --------->AHL20(2)  <---------AHL20(2)    ----   aagacaaatgaatccaatgttccactaaatcactaaaaaaaattttgtcgaaaaaaaataaaaaaattgtatattatttacttgcaaattgcgaaaaaga  410200                                                  --------->MYB52(1)      --------->TOE1(2)                       <---------TOE2(3) -------->ANAC81  ------->TEIL                <---------TOE1(3)                           --------->MYB52(1) ->DOF2        <---------YAB1   <------------CBF--------->ARR11(3)                      --------->ICU4 ------>DOF2--------->ICU4 ----------->GT1    <---------YAB1               --------->CCA1(2)   aaagaaaacttgggattatgaatatcaaattgtatattgggcctatttaagataacgagcccaggcccatctaaatgatatgaaaatgaaattatcggca  410300                                                                                               <-----                                                                                    <-----------HVH21                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)              <------------CBF             <---------At4g35610                 --------->GLK1(1)           ------>NtERF2                   --------->GLK1(1)                   <---------GLK1(1) <---          --------->ANAC46*TSS             --------->At4g35610            <---------ZAT14    <-------         <---------At4g35610         --------->ANAC46                   --------->ETT(2)--------->At4g35610         --------->At4g35610        <---------LBD16                     <---------ETT(2)<---------At4g35610   tttcgagtttcagcgccattgaaacgtttcaaaattttcacggagagctccaaaatcagagagagagagagatgtctacagagatcggtcatcttcgtcg  410400                                                                                  <-----------HVH21                                                         --------->YAB1      <-----------GT1                                                        <---------ATHB12    <-----------GT1                                          ------>ZmHOX2a(2)          <---------TOE2(3) ----DEAR3(1)                           <---------ARR11(3) --------->DOF5.7(2)   <----------DOF2 ---NtERF2--------->ARR11(3)            --------->ARR11(3) <---------MYB52(1)---------->ID1 ----HVH21<---------ARR11(3)  <---------ZAT6   <<<<<<<<<TBF1    <-----------RAV1(1)             <----   gagattagtcgagttcttgattcaatctactactgtaagtttgatcttcttcttctcaatcgttatctgttgatgttttttccctttcacttcaaaattt  410500                                                             --------->TOE2(3)                                                             <-------GAMYB                                                             --------->TOE1(3)                                                            ----------->GT1                                                            <---------MYB46(3)                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                 --------->HSFB2a(1)                                            --------->HSFB2a(2)            <----------DOF2       --------->GLK1(1)                    <---------HSFB2a(2)          <---------At4g35610    ------>ZmHOX2a(1)                 --------->ANAC58    <---------MYB52(1)  ----------->RAV1(2)                 --------->ANAC58=============HOX2a_HOX2a                      < -------GT1                         ---------->DOF2   ------>ZmHOX2a(1)  --------->At4g35610        <   tctctcctgatttcttcaaaaattttgtttctcatcgtgaaagctactcgaacttcctccgatcgttaaatattcagctctatcgctattcttcgatcga  410600                                                --------->ATHB12                                               ------>ZmHOX2a(1)                                               --------------->AGL15                                               <---------------AGL15                           <-----                                         --------->ATHB12                                      <-----                                         <---------ICU4                                     <--------               --------->MYB59  ------>ZmHOX2a(1)                                         --------->ATHB51     ------>ZmHOX2a(1)       <-----------GT1   ======================================================    <---------MYB59    <---------YAB1    <--------ATHB1                              ----------->GT1  ---------->ID1     <-----------GT1     --------->YAB1                             <---------TOE2(3) ---------ANAC58<---------ANAC55(2)     <---------ATHB12             <---------ARR14(2)  <---------YAB1 ---------ANAC58--------->ANAC55(2)     --------->ICU4     --------->ICU4  <---------WOX13(1)  <-----   tttcgtcctaatttagtcaggtattaccattttcctcttccaatgattcctgatttgagtaatttttagtgaattcgattgattttagggtataattgac  410700                <---------DEAR3(2)               <---------DEAR4(1)               <---------DEAR3(1)                               <---------TOE2(3)               <---------DREB2C(2)    <---------ANAC58         <-----------GT1        <---------ATHB12<---------AHL20(2)           <---------WOX13(1)                           ---        <---------YAB1 <---------AHL20(1)          <------ZmHOX2a(1)                             <--- ----TOE2(3)  --------->DDF1    ==========================HOX2a_HOX2a                          ------ ------------AG<---------At1g77200    <---------ANAC58   <---------WOX13(1)                   <------ -WOX13(1)  <-----------RAV1(1) <------ZmHOX2a(2)<---------TOE2(2)                            ------- ============MADS_MADS --------->ARR11(3)        <---------TOE1(2)                        <------ZmHOX2a(2) ------------AGL1      <---------ARR11(3)    <---------LBD16 --------->CCA1(2)           <---------ARR11(3)   gaaatcggtaatcaatgtcggtgtatatatttggatcagtgcttgttttcggaggattgatagatttacgatgtgttagtatttgactcgagatcaacta  410800  Previous    Next  AGI:  At2g01905.1    Description:  CYCJ18 (CYCLIN J18). Identical to Cyclin-J18 (CYCJ18) [Arabidopsis Thaliana] (GB:Q9C5X2); similar to Cyclin-J18-like (GB:Q0DTM7); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028) Range:  from: 410326    to: 415329    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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