Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ARR14(2)           --------->ANAC55(2)           <---------ANAC55(2)         <-----------GT1  --------->LBD16               <-----------GT1 <---------ANAC58        <---------AHL20(2) <---------LBD16         <-----------GT1                         >>>>>>>>>WRKY18 <---------ANAC58     --------->ARR14(2)               ----------->GT1                            <-- <---------ANAC46     <---------ARR14(2)              ----------->GT1       <---------TOE2(3)     --- ---------LBD16<---------ARR14(2)                   ---------->DOF2  ----------->GT1             ----   attgcgggaaattacgagataccgtatttacattttacattctaatattctatagaaaggaaaattttgacaggtatttagattactgtttttgcaaaat  384800                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC55(2)                                                                                    ----------->GT1                                                                                    <------MYB46(1) <                                                                                   --------->MYB59  -                                                                              --------->AHL20(1)    <           --------->YAB1                                                   <-----------------AG   --       ------>ZmHOX2a(1)        <-----------GT1                      ---------->DOF2<------MYB83  <-- <---------ARR11(3)           --------->ARR11(3)                 <---------------AGL15         ------ --------->ARR11(3)  <--------ATHB1      <---------YAB1          --------------->AGL15         <----- -------AHL20(2)     --------->YAB1    --------->YAB1           ==============================MADS_MADS ------>AHL20(2)    <---------ATHB12 ------>MYB83               <-----------------AGL3      --------- ----->AHL20(2)     <---------ATHB51 ------>MYB46(1)----------->RAV1(1) ----------->GT1    <---------YAB1   taaaatctcctaataaaaaccaataatacaaatatcaccaaatatgatagaagacaacacaaatacactaaaaaaggaaacatattaggtaacatgattt  384900       <-----------GT1 <---------YAB1                                                  --------->YAB1 ---------AHL20(1)                                              <---------TOE2(3)                  -- -------->AHL20(2)                                              <---------YAB1                    <-- ---------AHL20(2)                                             <-----------GT1                  ----- ------->YAB1                                             --------->AHL20(2)              --------->YAB1 -------YAB1                                              <---------AHL20(2)              --------->AHL20(2) --->AHL20(2)                  --------->AHL20(2)        --------->AHL20(2)              <---------ATHB12 ----AHL20(2)                <----------DOF2   --------->HSFB2a(2)                    --------------- >ATHB12                     --------->TOE2(3) <---------HSFB2a(2)                   ----------------   attataattttgccatctaaaatatggtttactttaaatatgtagacttctggaccatataaaattaacataattttggaaactatatccaattatatca  385000                                --------->AHL20(2)                               <---------YAB1                             <--------HAHB4                             <---------ICU4                             -------->HAHB4                             -------->ATHB1                             --------->ATHB51                             --------->YAB1                             <---------AHL20(2)                            --------->ICU4                            <---------YAB1                            <---------ATHB51           --------->At4g35610                         <---------YAB1                --------->ZAT2                        <---------AHL20(2)             <---------ZAT2 ------->AHL20(2)       --------->AHL20(2)             <---------At4g35610 -------ATHB12    --------->AHL20(2)          --------->ARR11(3)                                 <--- ---->WOX13(1)    <---------AHL20(2)          <---------ARR11(3)          <-----------GT1       ----- >AGL15<---------AHL20(2)<---------AHL20(2)  --------->CCA1(1)          --------->AHL20(2)      ----- ->AGL3--------->AHL20(2)--------->AHL20(2)  --------->RVE1(1)     <---------AHL20(2)           -----   atcaaatattaaaaaactatataaattttaattattatatactctaaatatctatacagctggacatataaaaatttaacaaaattttggaaactaatac  385100                                                                          --------->AHL20(2)                                                                          <---------AHL20(2)                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                                                      --------->AHL20(1)                                        <---------RVE1(1)             --------->AHL20(2)                                        <---------CCA1(1)             <---------AHL20(2)                                       --------->AHL20(1)            <---------AHL20(2)                                       --------->ARR11(3)            --------->AHL20(2)        --------->WOX13(1)             <---------ARR11(3)           <---------AHL20(1)  --------->AHL20(2)                <---------TOE2(3)              --------->YAB1  --------->YAB1                   ---------->DOF2           ----------->GT1 <---------ATHB12                 <---------AHL20(2)      <---------ARR14(2) ------MYB59                ------------>CBF    <------------CBF --------->AHL20(2)          -------- ---->ANAC46                <---------ATHB12<---------AHL20(2)--------->TOE2(3)              -------- ---->ANAC58     ----------->TBP  --------->AHL20(2)      --------->ARR14(2)               <--------- ---->ANAC58   --------->YAB1    --------->AHL20(2)       --------->GLK1(2)       ----------->GT1 *TSS   ccaattatatccatcaaatataaaaactaaatcaatttaaagatattaaaaattgttgagaattcgttaaaataatttaaaaaatcgaaatataaacgac  385200                                                                                             --------                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                                                         --------->ANAC58                                                  ---------->ID1                 <---------GLK1(2) ---------->DOF2       <-----------GT1          <---------ANAC58                <---------At4g35610 ->MYB46(3)         --------->ARR14(2)          <---------ANAC58            <----------DOF2  -------- ->ANAC46           <---------ARR14(2)      <---------DAG2          <XXXXXXXXXXXXXXXXXXXXMIR390A/B --GT1  --------->At4g35610          --------->ATHB12  ------>ZmHOX2a(1)    ----------------------->TaNAC69(2)   ccaaaaagacagatggaaaccatattcactctctcttcttcattagcctttcgtctccttcttctcttctctatctctctttagcttctctacgcaagct  385300                                                              --------->CCA1(2)                                                             --------->ARR11(3)                                                             <---------ARR11(3)      <----------DOF2                                    ---------->DOF2                          <-- <-----------GT1   <---------DAG2                   --------->At5g28300                 --------->ATHB12 ->ANAC58          <----------DOF2                 <---------ZAT6                   ----------->GT1 ->ANAC58     ---------->DOF2                      ----------->GT1          --------->GLK1(2) <<<<<<<   tattatctctttctcttaaagctttttctatatacaaacagaagcgtttgatactgtaaaaaagatttagaaatggagactctgagtcgtttattggttt  385400                                          --------->ARR14(3)                                          <---------ARR14(3)                                          --------->GLK1(2)                                          <---------ARR11(3)                                          --------->ARR14(2)                     <---------DAG2------                            <---------ARR14(2)                             --------->ANAC58    <-----                         <---------HSFB2a(2)              <----------DOF2  --------->ANAC46  --------                         --------->HSFB2a(2)        --------->YAB1         --------->ANAC58  --------                        <---------LBD16   --------->ARR11(3)      ---------->DOF2<----------DOF2 -------AtLEC2--------->LBD16<---------GLK1(1)     <---------ATHB12      --------->ZAT6 ----------->HVH21 <<MYB2     <---------LBD16 --------->ARR14(2)   --------->WOX13(1) ----------->GT1     <----------ARF1   tcatgtctctgttttccggtttagtttctggatttgctctgcaaaatcttccaatcacatcttttgaagaaagttacactcaactttttggtgacaagaa  385500                                    ------->GAMYB                                 <---------DOF5.7(2)                                <---------WRKY12                             --------->LBD16             ----------->GT1                           <---------LBD16             --------->SPL7                         <-----------HVH21           <---------MYB52(1)                     --------->ARR14(2)              <---------SPL7                     <---------ARR14(2)          --------->MYB52(1)                <-----------GT1 --->ARR11(3)        --------->GLK1(2)          <---------ARR14(2)             --------->AHL20(2) ----ARR11(3)        <-----------ARR10          --------->ARR14(2)             <---------AHL20(2) ->ANAC58           <---------GLK1(1)       ---------->DOF2           ------>ZmHOX2a(1) ->ANAC58       ----------->GT1 <---------WRKY38(1)<---------------AtSPL3 <---------MYB52(1)      ---   cttatttgttcatcaagatggcaaatctgtccggttaacgctcgatgaaagaaccggtacggtttaatcttcctctgttttttaatttccttctcatttt  385600                                                           <---------ANAC46                                                           <---------ANAC58                                                           <---------AtLEC2                                                           <---------ANAC58                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                    <---------YAB1            --------->ARR11(3)                    <---------ICU4                   --------->AHL20(2)           <---------ICU4                        --------->ICU4                    <---------AHL20(2)           --------->ATHB12                      <---------YAB1                    --------->AHL20(1)          --------->ICU4        --------->LBD16-------->HAHB4                     --------->AHL20(2)          <---------ATHB12    <---------LBD16  <---------ICU4                  --------->WOX13(1)<---          <---------YAB1    <---------ARR14(2) --------->YAB1               <----------DOF2   <------        --------->YAB1      --------->ARR14(2)--------->ICU4         <---------ZAT14   <-----------GT1 ------------>AGL15      <---------TOE1(2)    <---------ATHB12  <---------GLK1(2) <---------AHL20(2)   ctcggtttagtaatgattttgtttttgcaggttccggttttgtttcaaatgattattacttgcatggattcttcagtgcttcaattaaattaccttctga  385700  Previous    Next  AGI:  At2g01850.1    Description:  EXGT-A3 (endo-xyloglucan transferase A3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 27 precursor (XTH27) [Arabidopsis Thaliana] (GB:Q8LDS2;GB:O04906;GB:Q9SEB1); similar to XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT1G14720.1); similar to xyloglucan endotransglycosylase/hydrolase precursor XTH-39 [Populus tremula] (GB:ABM91072.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Xyloglucan endotran Range:  from: 385198    to: 387343    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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