Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->LBD16        ----------->GT1       --------->ANAC46                                                                             <       --------->HSFB2a(2)                     <---------DAG2                                    ----       <---------HSFB2a(2)                     <----------DOF2                              <------ZmHOX2a(2)      <---------LBD16--------------->AtSPL8 <-----------GT1                                 ========= ----->TEIL        --------->GLK1(2)  <----------DOF2<---------AHL20(2)--------->AHL20(2) <---------GLK1(1)   gaatattatccggaaaaaaacaatctgtacaaatttgaaactttattgactttattttttttatatgaagaaatttaaaacttgaattagagagatcagt  355100                                                      --------->At4g35610                                                   --------->At4g35610                                                  --------->GLK1(2)                                                  --------->ARR14(2)                                                  <---------ARR14(2)            <---------AHL20(2)                                                 <---------GLK1(2)    <---------AHL20(2)           ----------->GT1                  --------->CCA1(2)         <---------YAB1         ---------->DOF2                   <---------ARR14(2)      <---------DAG2       <------ZmHOX2a(1)                   --------->ARR11(3)      <---------------AGL15     --------->MYB59                       --------->ARR14(2)      <----------DOF2  ---------->DOF2 ---------YAB1                            <------ZmHOX2a(1)        --------------->AGL15      <------ ----->ZAT14       --------->AHL20(2)   <---------TOE1(3)          ================================== =============HOX2a_HOX2a               <---------TOE2(3)       <-----------GT1 --------->AHL20(2)   ttacaattaggaaaagaaaaaaaaaataaaactacatttttgaaggatatggaatctgcagaaattttactttttattgaaatttataaagaatttataa  355200                <---------ICU4                --------->YAB1                          --------->AHL20(2)   <---------------AGL15                               <---------AHL20(2)   <----------DOF2       --------->AHL20(2)<---------ANAC58 ---YAB1       <---------ATHB12            <---------ANAC58             ------->TEIL ==================MADS_MADS             <-----------GT1<---------AHL20(2)                         --   atgggctatatgaagaaatcataactataaattttgcagaaattttcttgtttctaatttatattgaaactatgaacttgaattgaagggatttgttttc  355300                                 <---------AHL20(2)                                 --------->AHL20(2)           <-------TEIL                         --------->ZAT14                    <---------GLK1(2)                      <-                         <---------ZAT14                    --------->ARR14(2)                <------                     --------->ZAT6   ----------->GT1       <---------ARR14(2)           <----------DOF2         ----------->RAV1(1)    --------->AHL20(2)     ------->TEIL                 --------->GLK1(1) ------->MYB46(3)<---------MYB52(2)  --------->YAB1--------------->AtSPL8     --------->GLK1(2)   <--   aacaacaacaacaacaaaaactaacactgcagaaattaataagaaaaaatgagcatgtaccagattcattttggtatgagaaactgagttcctttgatag  355400                                                     <---------ZAT18                                                <---------AHL20(2)             <---------AHL20(2)              --------->AHL20(1)          <---------ARR11(3)                 <---------AHL20(1)          --------->ARR11(3)               <---------ARR11(3)        ----------->ARR10                  --------->AHL20(1)                             --------->ANAC58 --------->At4g35610                       <---------AHL20(1)                 >>>>>>>>>TBF1    ------ <---------At4g35610                       --------->ARR11(3)              >>>>>>>>>TBF1  --------->ANAC58 ----------RAV1(2)          --------->YAB1--------->YAB1                >>>>>>>>>TBF1   ---------->DOF2 ---WOX13(1)--------->AHL20(2)  <---------ARR11(3)  <---------ZAT6   >>>>>>>>>TBF1  <---------------- ----ZmHOX2a(2)            <------ZmHOX2a(2) --------->AHL20(2)<------ZmHOX2a(1)   <----------ID1   atcagatgagaagattttatatttctccgatcaaaatcatccaaaaatattttagtgttcttggaggagaagaagaagaagaagaaggccaaaagcaaaa  355500                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                                             --------                                                                                             <-------                                                                  <---------TOE2(3)       --------->WOX13(1)                                                                 ---------->DOF2    --------->HSFB2a(1)                                   --------->AHL20(2)          <---------YAB1       <---------HSFB2a(1)                                  --------->YAB1        --------->ANAC46         <------ZmHOX2a(1) --                           ----------->GT1              --------->ANAC58  <---------ARR11(3) <------- ---->DOF2           *TSS  <---------ANAC46             --------->ANAC58  --------->ARR11(3) -------- -----WRI1----------->GT1  <---------ZAT6             --------->MYB52(1) --------->YAB1 ------------>CBF   agaagaagagagatgtgatttgatttgtagtgtgaataaaaatagtagaagaaggcaaacgaaatattaaagaaatgatattaggaatgtttcaattaat  355600  <------------CBF --------ANAC55(2)                ---------->DOF2 ----->AHL20(2)             <---------AHL20(2) --------GT1            <---------AHL20(1)                   <---------AHL20(2) ->AHL20(1)             --------->AHL20(1)              <---------TOE2(3) --AHL20(1)             --------->AHL20(2)              <---------YAB1----------->GT1--------->ZAT18 ------->ANAC55(2)      <---------AHL20(2)            <---------AHL20(2)        ---------->DOF2   --- --AHL20(2)          --------->YAB1  ----------->GT1  --------->AHL20(2)      --------->YAB1  <------ ->AHL20(2)<---------ANAC46 --------->AHL20(2)  --------->YAB1       ----------->GT1 <---------ZAT14   tacatattgtgttttgtggagaataataaattaaaaaaaaggaaactaaatgacaattaatattaaaaatgagggaaaaatcaaaagtccacagagtcaa  355700                    --------->TOE2(3)                    <---------MYB59  <---------ANAC46                    --------------->AGL15                    <---------------AGL15                   ----------------->AGL3                   <-----------------AGL3                   ----------------->AGL1                       --------->AHL20(2)                   ----------------->AG                         <---------AHL20(2)                   <---------ANAC55(2)--------->LBD16          --------->AHL20(2)                   ----------------->AGL2                   <----------DOF2                   <-----------------AGL1            ------->MYC3   <------------AtMYB77          <-----------RAV1(2) <-------MYC3 ------>YAB1<----------DOF2   <---------GLK1(1)      ------->MYC2    <---------At5g28300 ---WRKY38(1)      <-----------------AG<------NtERF2 <-------MYC2   <-----------GT1   caataactgtgactctttaatacctaaaatggataccaggcgggaatatgaagcatgtgtaacttttaaattactgttttgtctctagataaatcgataa  355800                                                          <---------AHL20(2)                                                       --------->ATHB51                                                       -------->HAHB4                                                       <--------ATHB1                                                       <--------HAHB4                                                       --------->YAB1                                                       <---------ICU4                                                      <---------YAB1                               <------MYB46(1)        <---------ATHB51                               <------MYB83           --------->ICU4                              --------->MYB59    ----------->GT1          --------->ICU4                         <---------ATHB12        --------->YAB1      <---------ZAT18            -----                   <<<<<<<<<<GATA-1   --------->AHL20(2)  --------->AHL20(2)                   ------                  <---------GLK1(1) <---------YAB1  --------->YAB1   --------->ZAT18      -----------                  --------->GLK1(1) --------->ICU4 <---------YAB1--------->ATHB12  <----------DOF2   gtatgtttttaatacgaatgaaatccactaattaggtcattaatatgcaaattgtaataattaaaaatgagtggacataatttgactttgaggggcaaaa  355900                                         --------->HSFB2a(1)         --------->ANAC46                                         --------->HSFC1(2)   --------->HSFC1(2)                                         <---------HSFC1(2)   --------->HSFB2a(1)                                      ---------->DOF2         <---------HSFC1(2)                                   --------->ANAC58           <---------HSFB2a(1)                                   --------->ANAC58        --------->LBD16 ---->DAG2<---------YAB1      <---------TOE2(3)          <---------------------WRI1 ---->DOF2<---------AHL20(2) --------->DAG2          <-----------GT1 --------->ANAC58          ------ >GT1 <----------DOF2       ---------->DOF2    ------>ZmHOX2a(1)     --------->ANAC58          ------   agttaagtctttataatttagatggtgcgataaaggtaagcaaagcttcctatatttactccgaaatttccaaggaaacaacttatcaaatttagaatta  356000  Previous    Next  AGI:  At2g01818.1    Description:  zinc ion binding. similar to zinc-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G60670.1); similar to putative zinc-binding protein [Cryptomeria japonica] (GB:BAE92295.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Protein of unknown function DUF597 (InterPro:IPR006734) Range:  from: 353456    to: 355521    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version