Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------HSFB2a(2)                                  --------->HSFB2a(2)        <----------DOF2        ------>ZmHOX2a(1) --------ANAC58         <---------ZAT14 ------GAMYB            <---------ZAT18                                                  ---------->DOF2 --------ANAC58         <---------ARR14(2)       --------->ANAC46                     ----------->RAV1(1) ---->LBD16             --------->ARR14(2)     --------->TOE2(3)           <---------ARR11(3)-------- ----LBD16              --------->ZAT14       <----------ID1  ---------->DOF2     --------->ANAC46   gggttgtgttcttttcatcaaaccagtatactccttctgaaaaacaaaaccacaaaacaaacttgaaagcatgacaagagctatactccaacaaagtgga  342100                                                       --------->TOE2(3)                                                      <---------YAB1                                                     <---------At5g28300                            <                                                    <-----------GT1                                 -                                                  <---------WOX13(1)                           ------                                          <---------CCA1(2)                                    ------                                          <---------MYB52(1)                                   ------                                        --------->ANAC58                                     --------                                        --------->ANAC46                                  --------->ANAC46                                        --------->ANAC55(1)                               --------->HSFB2a(2)                                        --------->ANAC55(2)                <---------ANAC58 <--------   ----------->GT1                      --------->ANAC58              <----------DOF2     <---------HSFB2a(2) <---------ZAT14       <---------MYB46(3)--------->LBD16      ---------->DOF2            <---------LBD16 ->ALFIN1   --------->WOX13(1)          <---------ANAC55(2) <---------ZAT6 <---------ANAC58--------->LBD16   gagagtagtagaaacaatcaccttgttgttgggagagttctcccgtaacttgatttaccatagtgaaagaaactttagcgcgtcttctccatccggaagg  342200                                                                                          --------->ANAC58     --------->YAB1                                                                       --------->AtLEC2 ---------ARR14(2)                                                                        --------->ANAC46 -------->ARR14(2)                       --------->YAB1                      --------->REM1(2) ----->GT1                              <---------YAB1                    <---------ANAC46--------->ANAC58 --->ANAC58                          --------->ICU4               <---------HSFB2a(2)   ---------->DOF2 --->ANAC58              --------->CCA1(2)    --------->ARR11(3) <---------LBD16       -------->P ->SPL7  --------->GLK1(2)<-------TEIL--------->YAB1<---------YAB1--------->HSFB2a(2)  ------>MYB83-- -MYB52(1)    <------ZmHOX2a(1) ----------->GT1--------->CCA1(2)<---------LBD16        ------>MYB46(1)   caaatactcagaatcaggaacacatagatacagagagaaataatcatagatatagttattgtttccctcgggaagggcgagtagacacctacaagcaaaa  342300                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                    ------>MYB46(1)                                                                                    ------>MYB83                                                                                   --------->ORA47(1)                                                                                  --------->MYB46(3)                                                                                  --------->DREB2C(2)                                                                                  --------->DEAR4(1)                                                                                  ------->GAMYB                                                                                  --------->DEAR3(1)                                                                                  <---------MYB55(2)                                                                                  <---------MYB111(1)                                                                                  ----------->HVH21                                                                                  <---------MYB46(2)                                                                                  <---------MYB111(2)                                                                                 --------->DEAR3(2)                                                                                 <------NtERF2                                                                                --------->MYB52(1)                                                                                ------>NtERF2                                                                               --------->DEAR3(1)                                                                              --------->MYB46(3)                                                                              <---------ABI4(2)                                                                              <---------MYB55(2)                                                                              --------->ATERF1(1)                                                                     ================================               <---------ANAC58                                      --------------->AGL15               <---------AtLEC2                                      <---------------AGL15               --------------------->WRI1                           ----------------->AGL1   --------               <---------ANAC58                                     ----------------->AGL2   --------               <---------ANAC46      --------->AHL20(1)           <-----------GT1--------->MYB46(3)    <---------GLK1(2)                <---------AHL20(1)--------->ANAC58      ------>NtERF2   <------- --------->RAV1(1)                  --------->AHL20(2) --------->ANAC58      <---------At4g35610 ----   accacagaaactcatttgcttgtagctatcgaacacaaatatatatcacttgcaaacaagaaatgttcttaccatttgcagccaccgaccacgaatatat  342400    <-----------GT1                                                                               --- ===================================MADS_MADS <---------ALFIN1                           --------->YAB1 ->ARR11(3)                          --------->WOX13(1)                                  <---------ICU4 ->AHL20(1)            ---------->DOF2      --------->ANAC46       --------->KAN4(2)    --------->ICU4 --ARR11(3)         <---------------AGL15  --------->MYB46(3)     <---------ICU4      --------->YAB1 ----->YAB1 --------->YAB1       ----------->GT1                 <---------YAB1      <---------YAB1 -   cagaataaactctatcggaatccaaaaaagagaaattgttaatcacccacaacttcttaacagcttgatgattccccattgttcttgatgataatgactc  342500                             <---------------AGL15                             --------->YAB1            --------->AHL20(2)            <---------AHL20(2)     <---------HSFB2a(2)       ------------>CBF      --------------->AGL15      --------->ANAC58      ----------------->AGL1      --------->ANAC46      ----------------->AGL2                 <---------ZAT14              -----      --------->ANAC58     -------->P                              --------->ZAT14           -------- --->ZmHOX2a(1)          --------->MYB46(3)                        --------->ZAT18  ----------->GT1 ---------->TBP  <-----------GT1   --------->HSFB2a(2)         --------->ZAT6     <------------CBF<--   ctataaacacacaattttttaactcaaacaaccatatcgagaaacaaaaccaaaatatagaactaagactacactatggaacaacattgtaaaaaaaaca  342600                                                                                             --------                                                                                             <-------                                     --------->ANAC58                                        <-------        <-----------GT1              --------->ANAC58                                    <---------ALFIN1   <---------AHL20(2)             --------->WRKY18(1)                                  ----------->RAV1(1)   --------->AHL20(2)            <-----------HVH21                           <---------AHL20(1)  <---------AHL20(2)         --------->MYB52(1)                              --------->ARR11(3) ------>GT1                <---------MYB52(2)                                --------->AHL20(1) ---->MYB.PH3(1)           --------->MYB46(3)                               <---------AHL20(2)   ---- -------MYB52(1)        <------ZmHOX2a(1)    ---------->DOF2   ------------>CBF        <---------ALFIN1   gttatttatttcacatgttaccaagaggaacgaacagtcaaggaaatgaaagagtaagacagatagacaatgaactaaatattttggagccacagctttt  342700          <---------ANAC46                                                               <---------AHL20(2)         <-------MYC2                                                                 <---------AHL20(2)         ------->MYC2                                                                 <---------AHL20(1)         ------->MYC3                                                               <---------AHL20(2)       ------->TEIL                            --------->TOE2(1)                    <---------AHL20(1)    --------->ANAC58                           --------->ANAC46                <---------AHL20(2)    --------->ANAC58                           --------->TOE1(1)              --------->AHL20(2) ------->AGL15                  <---------ARR14(2) --------->ANAC58      <--------P--------->YAB1 --- ---DOF2 <-------MYC3           --------->GLK1(2)  --------->ANAC58     <-------GAMYB --------->AHL20(1) --------AGL15          <------ZmHOX2a(1)     ------>ZmHOX2a(1)<---------At4g35610<---------YAB1 ---- ------>DOF2 --------->REM1(2)  --------->ARR14(2)--------->SPL7       ----------->GT1--------->AHL20(2)   aaaggcatgcatgtgtgtagacgagaggaatgcgaatcgtttcgactcctcgtaagtcatactatagctcatagggttgattttataatattttaaaaaa  342800           --------->ATHB51           --------->ATHB12           -------->HAHB4           <--------ATHB1           <---------ICU4          <---------YAB1          <---------ATHB51          --------->ICU4        --------->YAB1        <---------ICU4       <---------YAB1       --------->ICU4                                                                             ---     --------->YAB1                                                             ----------->GT1  ----   --------->AHL20(2)                            <---------ICU4     <-----------GT1              ----   --------->AHL20(1)                            --------->ATHB12  <-----------GT1--------->AHL20(2)  --------->YAB1                                <---------YAB1    --------->AHL20(2)    <---------AHL20(2) ------>AHL20(2)                             --------->ICU4       <---------AHL20(2)   --------->AHL20(2) ----->AHL20(2)                     <---------AHL20(2)     ----------->GT1  --------->YAB1---------->DOF2   taaaaaataataataattggggtttttttgtcaagaatttttttgtaatagttattgcaagacgaaaattaaactttctcataagtaaatttaaaaggag  342900               --------->LBD16       --------->ARR11(3)       <---------ARR11(3)  <---------bZIP60(2)   ---------->DOF2         <---------ANAC46                                            <---------ARR14(2) -------->GT1 --------->LBD16                                                          --------->ARR14(2) ------->GT1 --------->HSFB2a(2)                        <---------HSFB2a(2)      <---------AtMYB61 ----->ALFIN1<---------HSFB2a(2)                 <---------TOE2(3)        ---------->DOF2   tggaaaaaagatgttcccgagaacaagtgatgtggattatagatgagttttaagaatactagaaattgcagcgatacaaagctatggtggatttgactac  343000  Previous    Next  AGI:  At2g01790.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G27040.1); similar to MATH domain containing protein [Brassica oleracea] (GB:ABD65138.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 341321    to: 342479    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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