Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ----------->GT1         <---------YAB1                                               --------->ANAC55(2)    <------ZmHOX2a(1)                                                 <---------ANAC55(1) --------->HSFB2a(2)                                                  <---------ANAC58 <---------HSFB2a(2)                             ------>MYB46(1)      <---------ANAC46 ----->ZmHOX2a(2)                                ------>MYB83         <---------ANAC58 -------ARR11(3)                                 ----------->RAV1(1)  <---------ANAC55(2) ------>ARR11(3)                              --------->ANAC46       <<<<<<<<<NAP ---ANAC58                                  <-----------GT1<---------ANAC46 ---ANAC58                                <---------AHL20(2) --------->ALFIN1   --------->AHL20(2) ---AtLEC2         ----------->GT1<------ZmHOX2a(1)        <-----------RAV1(1)  <---------AHL20(2)   gatctaggactatttttgttttggtaaattagtctaggactaatttaaacccaacaaaattatgtgggacttacgtgtaaatttaaacaaattagtattc  336000                                --------->TOE2(3)                               --------->ANAC46                                             <--------                               --------->ANAC55(2)                                          <--------                              <---------TOE1(2)                  --------->AtMYB61          <--------                              <---------TOE2(2)                  --------------->AGL15--------->ATHB12                           --------->YAB1--------->YAB1         --------->ANAC46      <---------ICU4                      <---------DAG2     --------->TOE2(3)    --------->ANAC46       <---------YAB1                      <----------DOF2  <---------TOE2(3)    <-----------GT1        --------->YAB1                --------->AtMYB61<---------MYB52(1)      <---------ICU4            <---------ICU4             <-----------GT1--------->TOE2(2)           --------->ICU4           ------->TEIL        <----------DOF2   <---------YAB1<---------YAB1----------->GT1     <------ZmHOX2a(1) <--------   cattgaacaacttttataccacaactttatcatacgttatttatgttaatgtgtagtagtaattacaccacaagtaggaaatgaatcatcatttgcatgt  336100                                                                                                   --                                                                                                 ----                                                                                                 <---                                           --------->ANAC58                                      ----                                           --------->ANAC46                                     <----                                           --------->ANAC58                                     -----                                       <---------AHL20(2)               ------>NtERF2          <-----                                      --------->YAB1                   --------->DEAR3(1)    --------                                      --------->AHL20(2)              <----------CDC5        <-------   <---------ICU4                  --------->WOX13(1)                --------->LBD16         <-------   --------->ATHB51             <-----------HVH21                    ------>NtERF2          ---------  <---------MYB52(1)         <---------ANAC58                       --------->ANAC46        ---------  --------->ICU4             --------->ANAC55(2)                   <---------MYB55(2)       ------->PIF5 -ANAC46                     <---------ANAC55(1)                   <---------LBD16          <-------PIF5 -ANAC58                     <---------ANAC58                      --------->MYB46(3)      --------->DEAR3(2) -ANAC58                     <---------ANAC46          ---------->DOF2<------NtERF2        --------->At4g35610 -AtLEC2                     <---------ANAC55(2)  ----------->GT1--------->MYB52(1)     <---------ABI4(2)   agccattatttcaaaactatatagagagtttacgtgtcaattaaaacggaactagtaaaaagagaagtacccgccgagtcccatggagatagcaccggcc  336200                                                                <---------ANAC46                                                               --------->ATERF1(1)                                                              ------>NtERF2                                                              <---------RAP2.3(1)                                                              <---------ERF1                                                              <---------ATERF1(1)                                                              <---------DEAR4(2)                                                             <---------RAP2.3(3)                                                             --------->DEAR3(1)    <---------DEAR3(1)                                       <---------DEAR3(1) ---->NtERF2                                                 <---------ATERF1(2) -->NtERF2                                                   <---------RAP2.3(2) ---NtERF2                                                  --------->ATERF1(1) ----->LBD16                                               <---------ATERF1(1) -----ATERF1(1)                                           <---------DEAR3(1) ---->RAP2.6(2)                                   --------->LBD16 ----DEAR3(1)                                   <---------At4g35610 ->ANAC46                                       --------->At4g35610     ---------->DOF2            <- --ATERF1(1)                                    <------NtERF2--------->ATERF1(2)         <-----------HVH21 --SPL7                <------ZmHOX2a(1)        <---------LBD16<------NtERF2     --------->At5g28300- >DEAR3(1)--------->GLK1(2)             --------->ATHB12 --------->DEAR3(2)     ----------->GT1   --- >MYB46(3)<---------ARR14(2)      >>>>>>>>>TBF1------>NtERF2<---------ABI4(1)--------->MYB52(1)  ----   gcgacttcggcgattccagcggtaaggactatagaagaagaagcattggcaccggagagaccggcggcgagggcaaaaggaacggttaaaccatcagaga  336300                 <---------TOE2(2)                 --------->SPL7               --------->TOE1(2)              <---------TGA1a              <---------ANAC55(2)              --------->ANAC58              --------->ANAC55(2)              --------->ANAC58              --------->TGA1a     <---------ZAT14             --------------->AtSPL8          <-----------HVH21      ----------->HVH21         --------->bZIP60(1)    <------NtERF2         <---------bZIP60(1)    --------->At5g28300         <---------TGA2(1)     <---------MYB46(3)         --------->TGA2(1)    <---------DEAR3(1)      <---------YAB1        --------->LBD16    --------->YAB1          ------>NtERF2                              <----------DOF2   <---------ATHB12        <---------DEAR3(1)                   --------->ALFIN1   --------->ICU4<---------TOE1(2)--------->ZAT14         --------->HSFB2a(2) -----NtERF2 --------------->AtSPL3   --------->ALFIN1    <---------HSFB2a(2) -------->DEAR3(1)        <---------LBD16                ------>ZmHOX2a(2) <---------LBD16          - --->NtERF2  <---------------AtSPL3 <---------ANAC46 <---------YAB1   <---------ANAC58    --------->GLK1(2) ----->DEAR3(1)<---------SPL7<---------ABI4(1)       --------->ICU4   <---------ANAC58   <---------GLK1(2)   cgccgatgatgatgtcacgtacgatttctccggcggtgaagtgtttctcggtgtgatgatcgagaagtgtttgcttctccggttcgatagagattcttgt  336400                ------>NtERF2               --------->ANAC58               <---------ETT(2)               --------->ANAC46               --------->ANAC58                                                <---------ANAC58             ------>NtERF2                                                     --------->ALFIN1            --------->DEAR3(1)         <----------DOF2                         <---------ANAC58            ----------->HVH21        *TSS                                    --------->ALFIN1       <          ------>ZmHOX2a(1)      <---------GLK1(2)                       <---------ZAT14            <          ============================HOX2a_HOX2a                ---------->DOF2   --------->ALFIN1 -  <---------CCA1(2)            ------>ZmHOX2a(2)           <----------DOF2 <---------ANAC46       <-- -------->TOE2(3)          <---------YAB1               <-----------GT1  --------->ZAT14       <-----   aatcttatcttcctccgacgacattgttgatgatcgattctctttctctctcgttttttttctttctcaaagttgtgaagtgtgtgtgtgggaacatgat  336500                <---------AHL20(2)<---------AHL20(2)                --------->AHL20(2)<-----------TBP              <-----------TBP --------->AHL20(2)            <---------AHL20(2)<-----------TBP            --------->AHL20(2)<---------AHL20(2)            <-----------TBP <-----------TBP          <---------AHL20(2)<---------AHL20(2)          --------->AHL20(2)--------->AHL20(2)          <-----------TBP <-----------TBP        --------->AHL20(2)--------->AHL20(2)        <---------AHL20(2)<---------AHL20(2)--------->ANAC55(1)        <-----------TBP <---------AHL20(2)  --------->ANAC58      <-----------TBP --------->AHL20(2)    --------->ANAC58      --------->AHL20(2)--------->AHL20(2)  --------->ANAC46      <---------AHL20(2)<-----------TBP     --------->ANAC55(2)    <-----------TBP <-----------TBP --------->AHL20(2)    <---------AHL20(2)<-----------TBP       <---------ANAC55(2)    --------->AHL20(2)<---------AHL20(2)   <-------TEIL  --------->AHL20(2)<---------AHL20(2)--------->AHL20(2)  <---------AHL20(2)--------->AHL20(2)<---------AHL20(2)  <-----------TBP <-----------TBP --------->AHL20(2) ---------AHL20(2)--------->AHL20(2)<-----------TBP -----------TBP <-----------TBP --------->AHL20(2) -------->AHL20(2)<---------AHL20(2)<---------AHL20(2)                   --------->bZIP60(1)      <-- ---------TBP --------->AHL20(2)<-----------TBP---------->DOF2      --------->YAB1        ----------- ----ARR11(3) <---------AHL20(2)<---------AHL20(2)        ----------->GT1<---------bZIP60(1)      <--   atatatatatatatatatatatatatatatatatatatatatatatacgtaaagaacgaggggaaacatatcatcacatcatattagttattttgtaatt  336600                                                                    --------->ATHB12                                                                    --------->ATHB51                                                                    <---------ICU4                                                                    -------->ATHB1                                                                    <---------AHL20(2)                                                                    -------->HAHB4               ----                                                                   --------->ICU4        <---------AHL20(2)                                                                --------->AHL20(2)   --------->ATHB51                                                                <---------AHL20(2)   --------->AHL20(2)                                                               --------->AHL20(2)   <---------MYB52(1)                          ------>ZmHOX2a(1)                 --------->AHL20(2)      <---------YAB1                 <---------AHL20(2)                    --------->YAB1   --------->ATHB12 --------->YAB1 ----MYB83       --------->AHL20(2)              --------->AHL20(1)<---------ATHB51 --------->ICU4 >GT1    <---------AHL20(2)       <-------TEIL   <---------AHL20(1)<---------YAB1<---------YAB1  ---- ----MYB46(1)    <---------AHL20(1)        --------->YAB1  <---------AHL20(2)  <-----------GT1 ------   tggtttcaaatttacttaaaaaattttcctatgagtttcatttaagtataatatatatcatattatttaattattgatttgttaccattatttataagaa  336700                 --------->ANAC46                              <-----------HVH21    ---------->DOF2                                         --------->ALFIN1 ----->ANAC58    --------->ANAC58                       ---------->DOF2           <---------AHL20(2) ----->ANAC58    --------->ANAC58                      --------->AHL20(2)        --------->AHL20(2) - ---->DOF2  --------->ZAT6  --------->ANAC46           --------->YAB1       --------->ANAC55(2)   <--   agccataaaagaaaacactaagcaatatgcccacaagtagtttccatgagtttgcaattaaagtgtgtcaaatcccttacatattaattcaaacacatat  336800                                                <---------AHL20(2)                   --------->AHL20(2)                                                <---------YAB1         <---------AHL20(2)                                              <---------ICU4          --------->AHL20(1)                                             --------->ICU4           --------->AHL20(2)          --------->TOE2(3)               <---------YAB1              <---------AHL20(1)            <  <---------TOE2(3)                   --------->TOE2(3)               <---------AHL20(2)  ----------- --------->DOF2           ---------->DOF2 --------->AHL20(2)         --------->YAB1----------->GT1--- -------AHL20(2)  <---------ZAT6  <---------AHL20(2)      <---------ARR11(3)     ---------->DOF2<----   tttaaaggaaaacctttatactgtaagtaaaagtatttaatcttataaatattattccaagttattttctaatataatgaagagaaagtaaattgtatat  336900  Previous    Next  AGI:  At2g01770.1    Description:  VIT1 (VACUOLAR IRON TRANSPORTER 1); iron ion transmembrane transporter. similar to unknown [Populus trichocarpa] (GB:ABK94901.1); contains InterPro domain Protein of unknown function DUF125, transmembrane (InterPro:IPR008217) Range:  from: 334771    to: 336437    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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