Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------CCA1(2)                                                                   --------->TGA1a            -------                                                               ------>MYB46(1)              ---------                                                               ------>MYB83                 <--------                                                             --------->AtMYB61              ---------                                                             <---------MYB111(2)           <---------ALFIN1                                                             --------->DEAR3(1)            --------->DEAR3(1)                                                             <---------ALFIN1             --------->ANAC58                                                          --------->AtMYB61               --------->ANAC58                    --------->ARR14(2)                    --------->DEAR3(1)              --------->ANAC46         ----------->RAV1(1)   <-----------GT1            <---------ALFIN1              <---------ALFIN1   --------->ARR11(3)         <---------CCA1(2)          --------->MYB46(3)            <---------ABI4(2)   <---------ARR11(3)   ------>ZmHOX2a(1)              <-----------GT1                 <---------ZAT2  <---------CCA1(2) <---------ARR14(2)              <---------ICU4 --------->O2        --------->ZAT2   ctatatatctccaacatcgccatttcctcgttgtatccatacatttcatcttcatcttcaccacctccctcgtctctcacccttctccgagcaccgcacc  332600                                    ----------->HVH21            <-----------GT1                                    <---------SPL7          --------->MYB52(2)                            <---------ALFIN1               <--------P                          --------->LBD16                  <---------MYB55(1)                          ------>NtERF2 ----------->GT1   <---------MYB52(1)  --------->ARR11(3)     --------->ANAC46               --------->HSFB2a(2)  <---------ARR11(3)     --------->ANAC58               <---------HSFB2a(2) ---->RAV1(1)            --------->ANAC58--------->At5g28300<---------MYB46(3) >ZAT14     --------->ARR11(3)  <---------ZAT14        <---------LBD16 -ZAT18 ---------->DOF2 <---------LBD16<---------DEAR3(1)--------->LBD16                            < >ABI4(1)   <---------ARR11(3)  --------->ZAT14      <-----------GT1                                -   agaacatcttcaaagctcttcttctctccgccactggagggacggtgaaaagttttttccggtagttatacgagtttgtgagcgagggtattttagtcat  332700                                                             --------->ANAC58                                                             --------->ANAC58                                                      <---------ANAC46                                                     <------NtERF2                                     <------NtERF2  ------>NtERF2                                    --------->MYB52(1)<---------ANAC58                                    ------>NtERF2   <---------ATERF1(1)                             --------->ARR14(2)    --------->ATERF1(2)                           --------->LBD16         <---------ATERF1(2)                         <---------LBD16           --------->DEAR3(1)                       --------->GLK1(2)           <---------DEAR3(1)                           <----   <----------DOF2    --------->KAN4(2)           --------->ATERF1(1)                       <--------  ------>ZmHOX2a(2)  <---------KAN4(1)            <---------LBD16                          --------->At5g28300 ---------ARR11(3)   --------->KAN4(1) --------->LBD16<---------ANAC58          *TSS      ----------- -------->ARR11(3)  <---------KAN4(2)<---------LBD16--------->LBD16 <---------YAB1     <------ZmHOX2a(1)   ttgatctttctgtccgaaaacgaataatccggctatgccaccggataaattcgccggcgtgataagcattctgatattgtagtgcatgaggaccgtgact  332800                                                                  <-----------GT1                         <---------ANAC46              <------------CBF ------->GAMYB                     <------ZmHOX2a(1)              ------------>CBF ----------->RAV1(1)                 ---------->DOF2      <---------------AGL15       --------->YAB1               ------ ------DOF2 --------->ARR11(3)        --------------->AGL15    <---------ICU4              <--------- -MYB52(1)  <---------ARR11(3)      <-----------------AG      <---------AHL20(2)      <---------At4g35610 >GT1     ----------->ARR10   ------->TEIL--------->MYB52(1)  --------->AHL20(2)   --------->ZAT14   ttgtctatagataagattttaaaggactcgtgtatgtttacaaataagggtagtaccaattggattaattacaacagagtgccactacagctattaccag  332900                                                           --------->YAB1                --------->RVE1(1)                                                           <---------ICU4               --------->ARR11(3)                                                           --------->ATHB12             --------->GLK1(2)                                                      ------------>CBF                  <---------ARR11(3)         <---------ANAC58                       ------->TEIL                        ------->GAMYB         <---------ANAC58                       --------->SPL7                      --------->YAB1     <-------GAMYB                            --------->ZAT14                       --------->TOE2(3)    <---------ANAC58                        <---------------AtSPL3                 --------->MYB46(3)    <---------ANAC58                        --------------->AtSPL8<<<<<<<<<TBF1   -------->P <-------    --------->MYB52(2)                   <---------ZAT14   <--------HAHB4         ------>MYB83 <----------DOF2                         --------->ZAT14--------->WOX13(1)        ------>MYB46(1) --->ANAC46           >>>>>>>>>>>>>>>>>LFY<---------ALFIN1<---------ATHB12    --------->HSFB2a(2) --GT1<---------MYB52(1)    <---------MYB46(3)<---------ZAT14     *TSS <----------DOF2 <---------GLK1(2)   tcgctttcgttgcctctctcttcaaaccagtggctacttactcaacactgtacgtcttcaatcatttcttcttctttcttctccaaccaaaatctctttc  333000                                                           ------>ZmHOX2a(1)                                                         ----------------->AG                                --------->TOE1(3)        ----------------->AGL1                                --------->TOE2(3) ================HOX2a_HOX2a                            ---------->DOF2       <------ZmHOX2a(2)     --------->ARR14(2)                           --------->AtMYB61    ------->GAMYB        <---------TOE2(3)                          --------->ANAC58     --------->MYB46(3)<-------GAMYB                          --------->ANAC58  <---------WRKY12    ----------->GT1                        --------->ANAC46    <---------WRKY38(1) <------MYB46(1)                    <-  --------->ZAT14       --------->ANAC58   <------ZmHOX2a(2)    <------MYB83              --------->YAB1 ---DOF2                --------->ANAC58   =======================HOX2a_HOX2a            <---------YAB1   tcagttctctagggttttcaatactcacaccaaagcttaatgccgatcaacgatcagtttcctagtgggttaagaatactcgttgtagacgatgatactt  333100                                                                                 <---------ARR11(3)              --------->HSFB2a(2)                                                --------->ARR11(3)            <---------HSFB2a(2)                             ---------->DOF2      <---------GLK1(2)  <        --------->KAN4(2)     <-----------HVH21            --------->YAB1 --------->AHL20(2)       <- <---------ANAC58      <---------ANAC58                   <---------YAB1<----------DOF2     --------- <---------ANAC58      <---------ANAC58      <---------ARR11(3)     <---------ALFIN1      --------->ANAC58 --------YAB1 <---------HSFB2a(2)      ------->TEIL   <----------DOF2  <---------DAG2     --------->ANAC58   catgcttgttcattctcgagaaaatgcttctccgtctcatgtaccaaggtctaattctttatcaaagttcccaccttttaatagattttctcaagaaagt  333200                                                            <---------DOF5.7(2)                                                           --------->WRKY38(1)                  <----                                                        <---------ANAC46                        <----                      <----------DOF2                   <---------ANAC58                        <---- <---------TOE2(3)  <---------------AGL15               <---------ANAC58                        <---- -----------GT1     --------------->AGL15          <---------REM1(1)                       --------->ATHB12 ----------GT1<-----------GT1         --------->At4g35610 --------->DOF5.7(2)  ---------->DOF2 ------ ->DOF2      <-----------GT1  <-----------GT1      <-----------RAV1(1)    ---------->DOF2 <---------YAB1   tttaacatttttgttttatcttctctttgtagttacaatttgctcacaagctgatgttgcgttaaccattctaagagaaagaaaagacagttttgatttg  333300                                                                              <-----------HVH21                                                                             ------>ZmHOX2a(1)                                                                        ------>ZmHOX2a(2) --MYB83                      ----------->GT1                         <---------ARR14(2) -----ANAC58                  <---------MYB46(3)                      --------->ARR11(3)       <----- --MYB46(1)<-------TEIL  <---------YAB1               <------MYB46(1) ------->TEIL--------->ICU4 -----ANAC58       <---------ANAC46                   <------MYB83    --------->ARR14(2)      <------ --->MYB111(1)<---------At4g35610                   <--------P        <---------ARR11(3)   --------->GLK1(2)   gtgctaagtgatgttcatatgcctggtatgaatggttacaatcttcttcaacaagttggtcttcttgaaatggatcttcctgtcattagtaagactctgt  333400                                                                                                 ----                                                                                                -----                                                                                                <----                         <---------ICU4                                <-------GAMYB          <------  <---------YAB1 --------->ATHB12        <---------ANAC58              <---------At4g35610    ------- --GAMYB ---------->ID1------->TEIL      <---------ANAC58             <---------MYB46(3) --------->ZAT14 -----RAV1(1) ---------->DOF2 <---------AtLEC2                        <-----------RAV1(1)<---------ZAT14   tgttatgttttgtctctaaagattgaatctttgcatcaatgtttcttacatttgctctgtttctagtgatgtctgttgatggaagaacaactacagtcat  333500  Previous    Next  AGI:  At2g01755.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO42367.1) Range:  from: 332193    to: 332780    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g01760.1    Description:  ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14); transcription factor/ two-component response regulator. Identical to Two-component response regulator ARR14 (ARR14) [Arabidopsis Thaliana] (GB:Q8L9Y3;GB:Q9ZUA4); similar to ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12), transcription factor/ two-component response regulator [Arabidopsis thaliana] (TAIR:AT2G25180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42368.1); contains InterPro domain Response regulator, plant B-type (InterPro:IPR017053); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); Range:  from: 332966    to: 334695    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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