Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ----------->RAV1(1)                            <---------------AGL15         --------->REM1(1)                               --------------->AGL15    --------->ANAC58                            <---------HSFB2a(2)    --------->ANAC58                        <---------ARR14(2)              ---------->DOF2    --------->ANAC46                        <---------GLK1(2)           ---------->DOF2 ------GLK1(2)---------->DOF2       --------->YAB1      <-----------------AGL1          --------->At4g35610 ----->ARR14(2) --------->DAG2--------->ZAT6--------->ARR14(2)      ---------->DOF2   <------ZmHOX2a(1)   attctcaagctacaacaaaaggcataaaaaaaacactataatctcagatactagaaaaaccctaagaggcaaaagaaagaaagagagaggagatgagaaa  313400                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                       <---------GLK1(2)                                                                      <------NtERF2                                                                     <------NtERF2                                                                     --------->LBD16                                                                    --------->RAP2.6(2)                                                                   <---------LBD16                                                                   --------->SPL7                                                                  ------>NtERF2                                                                 ------>NtERF2                                                                 <---------SPL7            --------->ZAT18                                     <---------RAP2.6(2)         <--------       ---------->DOF2                                         --------->At4g35610       ----------->HVH21     --------->TOE2(3)        <---------YAB1                   <---------LBD16 ---------->DOF2     <-     --------->TOE1(3)<-----------GT1                         <-----------RAV1(1)      --------->At4g35610   attgaaacctcaagcgcagcatttttgcgcttctcatagagtttatcggagagattgcgatgaactgcggccggaatcgcagaaagagcgtctgacatgt  313500                                                                                             <-------         <<<<<<<<<<GATA-1                                                                  --------->GLK1(1)        --------->GLK1(1)                                                            ------>ZmHOX2a(2)        <---------GLK1(1)                                                            ================   --------->At4g35610                                      <------ZmHOX2a(1)        ================   <---------At4g35610                      --------->ARR14(2)                      ================= <-----------RAV1(2)                        <---------ARR14(2)                      <------ZmHOX2a(2) -bZIP60(2)   --------->ANAC46   <---------LBD16            ================================HOX2a_HOX2a ----------HVH21          --------->HSFB2a(1)               ===============================HOX2a_HOX2a   ctgtcagatgaaatccaccgaaaatcaaaccttctctcggagtcaaaatccacagcgagagaggagagcgagaaaccaaaatcgcgatcggagaaatcga  313600                                                    ----------->GT1                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                 --------->CCA1(2)                                                --------->ARR14(2)                                                <---------ARR11(3)               <------ZmHOX2a(1)                --------->ARR11(3)          --------->ALFIN1                      <-----------ARR10         --------->At4g35610                    <---------ARR14(2)         <---------At4g35610                    <---------AGP1                     --------->TOE2(3)       <------ZmHOX2a(1)                        --------->AGP1            <-----------RAV1(1) --------------WRI1           ---------->DOF2  <---------CCA1(2)        --------->At4g35610 =============HOX2a_HOX2a  ------->GAMYB      ----------->ARR10         ----------->RAV1(2) =====================HOX2a_HOX2a            --------->YAB1             <---------At4g35610     ----- =============HOX2a_HOX2a --------->ANAC46--------->WOX13(1)       ------->TEIL    --------->YAB1   tgagaagaaggagcggaggattatttcaacggcaaagacgaaaacaatcagatctggtcaaaaacgatgaactcatctgtggctaccatagttactcggt  313700                                                <---------AHL20(2)                                               <---------AHL20(2)                                               --------->AHL20(2)                                           <---------YAB1                                           <---------AHL20(2)               <---------ZAT14         <------------------------ANAC81               --------->ZAT14     <----------DOF2                     <---------ARR14(2)               --------->ZAT18    ------>ZmHOX2a(2)                    --------->ARR14(2)          <---------GLK1(1)     --------->ARR11(3)          <----------DOF2                       <-- ---->ARR14(2) <---------ZAT18  <---------ARR11(3)       <-----------GT1           <-----------HVH21   ttctccaattcgatttctgcacaaactaatttctgatcttttttttttattaatttgtttttctttcttagtggatttgttttttggtcacaagtgatgt  313800                                                                                                   <-                                                                                                 ----                                              <---------ANAC58                                  -----                                              <---------ANAC46                               --------                                              --------->ANAC55(2)                            <-------                                              <---------ANAC58                               --------                                              <---------ANAC55(2)                     --------->MYB52(2)          ----------->GT1                --------->DAG2                            --------->TOE2(3)-         --------->ANAC58          ----------->GT1 <---------YAB1                <---------TOE2(3)<--    *TSS --------->ANAC58     <----------ID1 <-------TEIL                    --------->TOE1(3) ------ --------DOF2            ---------->DOF2---------->DOF2                      --------->TOE2(3)<------   ctttaaaaaacaaggaaaaaaaactaataaagaagacaagtgaaaagtgcgtgatcactgtatcaaatgacaacttcacccttaatgttagtagcagcta  313900                                                          <------MYB46(1)                                                          <------MYB83   --------->At5g28300                                    ----------->GT1  ----------->GT1                                     <---------ARR14(2) --------LBD16                                        --------->ARR14(2) ---->P                                            --------------->AGL15 ---->MYB52(1)                                     <---------------AGL15 ->ZAT2--------->ICU4                       <---------TOE2(3)      <---------AHL20(2) --At4g35610                                <---------TOE1(3)     --------->AHL20(2) ->At4g35610                          =============================MADS_MADS -------->LBD16                       --------------->AGL15       <---------AHL20(2)               <- -------LBD16                         <---------------AGL15      <---------AHL20(2)                -- ----->HVH21              ----------->GT1   --------->MYB59     --------->YAB1        --------->TOE2(3) ---MYB52(2)     <-----------GT1   <-----------GT1<-----------------AG  <-----------GT1   --------->At4g35610   accggggtaatattggtatttactagagtggtattttttacaattttaggttacagtatttggttatattaatttttctattttgaaacattagctaaaa  314000                                        <---------AHL20(1)                                        --------->AHL20(1)                                         --                                        --------->AHL20(2)                                  <--------        <----------DOF2                 <---------AHL20(2)                                 <---------     <---------YAB1                    <---------AHL20(2)    <---------YAB1               --------->YAB1    --------->KAN4(2)              --------->AHL20(2)       --------->ARR11(3)           <---------YAB1   <---------KAN4(1)           ---------->DOF2              <---------ARR11(3)        <---------YAB1-  <---------YAB1    --------->ANAC46   --------->AHL20(2)--------->YAB1               <---------AHL20(2) --------YAB1     <-----------GT1----------->GT1         --------->AHL20(2)        ------->TEIL  ---- ------->ICU4 <---------AHL20(2)--------->DAG2     ----------->GT1              <---------YAB1 <-----   catgattattctttatttattcacatcacattgaaaagtaaataaattgtagttggaaataatatcatttcttcatatcaatatgaatattattatcaat  314100             <---------YAB1       <---------AHL20(1)       --------->AHL20(1)       <---------AHL20(2)                                                            <---------YAB1      <---------AHL20(2)                                                            <---------AHL20(2)     <---------YAB1                                                               <---------YAB1   <---------ICU4                                                              <---------YAB1   --------->YAB1            --------->YAB1                                    <---------AHL20(2)  --------->ICU4      <---------TOE2(3)                                        --------->AHL20(2)  <---------YAB1     <-----------GT1                                        --------->AHL20(1) --------->GT1  <---------YAB1                                              --------->AHL20(2)     -- -YAB1--------->AHL20(2)   --------->AHL20(2)                               <---------AHL20(1)     <- --GT1--------->YAB1<-----------GT1--------->ARR11(3)                       <---------AHL20(2)    <-- -------->YAB1<---------AHL20(2)   <---------ARR11(3)                   <---------CCA1(1)       ----- ----->YAB1 <---------AHL20(2)  <-----------GT1      <---------ICU4    --------->ARR11(3)      ------ ----YAB1 <---------AHL20(2)<---------YAB1       <-------TEIL          <---------ARR11(3)<-----------GT1   attgataattatatttttatttttaacatttttataacatcttcaaacacatacattatttcaaataccattagatattatattattattttaaacattt  314200                                                                                           <---------AHL20(2)         <---------CCA1(2)                                                                --------->AHL20(2) <---------YAB1                                                            --------->AHL20(1) ------->YAB1                                           --------->AHL20(2) <---------AHL20(1) --------ICU4                               <----------DOF2  ----------->GT1        <-----------GT1 -------YAB1         <---------YAB1       ------->TEIL  --------->YAB1     <---------AHL20(2)   <---- ---->YAB1       <----------DOF2 --------->AHL20(2)    <---------ATHB51    --------->AHL20(2)  ------ --->AHL20(2) <---------YAB1   <---------ANAC46        <---------ATHB12   --------->AHL20(2)   <-----   attattatttcatatcatgcttttttataggtgacttaaatatggactttgtttccaataatatagttatatcaaattttattttttaaacatttaatat  314300  Previous    Next  AGI:  At2g01690.1    Description:  binding. similar to hypothetical protein [Vitis vinifera] (GB:CAN65293.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ65024.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42357.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 308701    to: 313804    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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