Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ------>ZmHOX2a(2)                                  <---------ARR14(2)                                  --------->ARR14(2)                                  <---------AGP1                                  <---------ARR11(3)                                  --------->ARR11(3)                             <---------ANAC58                             <---------ANAC46                             <---------ANAC58                          <----------DOF2                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)          <---------ARR14(2)                        xxxxxxxxxxxxxxxx>smallRNA(s)                  --------->ARR14(2)            -                      <---------ANAC46        <------ZmHOX2a(2)       --------->GLK1(2)             <                      <---------ANAC58       <---------ARR11(3)      <---------GLK1(2)             <-                      <---------ANAC58   ---------->DOF2     --------->ANAC46                    ----                    xxxxxxxxxxxxxxxx>smallRNA(i)            <---------------AGL15         --------->YAB1                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     --------------->AGL15        <---------YAB1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->YAB1    ----------------->AGL2  <------------MYB.PH3(1)  <xxxxxxxxxxxxxxxxsmallRNA(i)   <---------CCA1(2)       <-----------GT1         <-----------GT1<---- ---->DOF2     ---------->DOF2<---------LBD16--------->ARR11(3) --------->YAB1   --------->MYB52(1)--   agcatgaagacggagaagaaagtgtcgtctttcgtggatctaataaagatcgaaacaaattacccataatagaatcggctatataacggttctcataaat  306000                                                                                             <-------                                               <-----------GT1                         --------->AHL20(2)                                          <---------ARR11(3)                           <---------AHL20(2)          --------->AHL20(2)              <---------AHL20(2)                          --------->YAB1         <---------ATHB12                 --------->AHL20(2)                          --------->AHL20(2)         --------->ICU4                   --------->AHL20(1)                     --------->LBD16         --------->AHL20(2)               <---------AHL20(1)                    <---------HSFB2a(2) -------->ATHB51                          --------->ARR11(3)                    --------->HSFB2a(2) ---------ICU4                           --------->AHL20(2)                     --------->HSFC1(1) --------YAB1                --------->At5g28300 <---------AtLEC2         <---------AHL20(2) <------- ----->YAB1      <---------AHL20(2)  >>>>>>>>>>GT-3b      <-----------GT1 <---------ICU4    --------- -----ATHB12  --------->YAB1----------->GT1<---------AHL20(2)         --------->AHL20(2)    <-------- ------->ICU4<---------AHL20(2) ---------->DOF2<---------AHL20(2)     <---------AHL20(2)    ---------   cataatttgcaataaataataaatctaaaacggtaaaagaaaaatatatttacatgaaaataacatgtcattttaaatatttccagaattaaaatataat  306100                    --------->ANAC55(2)       --------->MYB52(1)                                 ---------->DOF2     --------->HSFB2a(2)      <---------WRKY12<---------MYB52(1)              <---------AHL20(2)      <---------HSFC1(1)      <---------WRKY38(1)                           <---------YAB1            <---------HSFB2a(2)    <-----------HVH21--------->TOE2(3)             --------->AHL20(1)         --------->HSFC1(1)   ------->GAMYB    --------->ANAC46              <---------AHL20(2)<---------AHL20(2)  <<<<<<<<<TAC1    <-------TEIL                   --------->AHL20(2)--------->AHL20(2)  <------------AtMYB77--------->DOF5.7(2)        <---------AHL20(1) --------->AHL20(1) --AHL20(2)      <---------ARR14(2)              --------->AHL20(2)--------->AHL20(2)      <---------At4g35610 --YAB1<---------DOF5.7(2)                       <---------AHL20(2)<---------ATHB12    <-----------RAV1(1) >AHL20(1)       --------->ARR14(2)           --------->AHL20(2)   <---------ATHB51 --------->ICU4 -AHL20(1)   <-------TEIL             <---------------AtSPL8       <---------AHL20(2) <---------TOE2(3) >AHL20(2)------->GAMYB               --------------->AtSPL8<----------ID1   <---------ANAC46     ---   tccaactgtcaacggtccatatacgttatctatagactatatagtacataaattattttaaaaagacaaataatttgtttcgagaaataatgttgctgtc  306200                                                      <------ZmHOX2a(1)                                                     ----------->GT1                                             --------->ATHB51                      <---------WOX13(1)        ----------->GT1   --------->AHL20(2) -------->ATHB1                      --------->ATHB12       ----------->GT1  --------->AHL20(2)   --------->ATHB12                   <---------YAB1    <--   --------->ICU4  <-------TEIL             <---------ATHB51              <---------TOE2(3)       --- -------->GT1 --------->AHL20(2)            --------->ICU4                <---------TOE1(3)   -------   tcgtcaaaattggaaaaaaaatacattttaaaatacagagaaacgaattattgagaggagaaatttagagaccattcaggttttgattgaagaaaaaaaa  306300                                                           ---------->DOF2                                                        --------->TOE2(3)           --------->YAB1                               --------->TOE1(3)                        ----        <-----------GT1                        --------->ANAC58                                 <----       <---------AHL20(2)                    ---------->DOF2                          ---------->DOF2 -------GLK1(2)<----------DOF2           ----------->RAV1(1)                    ---------->DOF2------ ------>ARR14(2)              <-----------HVH21--------->ANAC58          <----------DOF2       ------ --->DOF2<-----------GT1     <---------ZAT6--------->MYB46(3)         ---------->ID1*TSS     <-------   gattcccattttatcatctttttagtttttagtgtcaactctccaacaaaagcaaaaaccttaaagaattttgttctttttttaaagcaaaagaaccaaa  306400                                                                       ------->TEIL                                                                       <---------ARR11(1)                                                                       --------->GLK1(2) ----->YAB1                     --------->YAB1                         --------->ARR14(2) -----ATHB12          --------->ATHB12                                <---------ARR14(1) >MYB83              <---------YAB1                      <---------DAG2<---------ARR14(2)           - >MYB46(1)           <---------AHL20(2)   --------->YAB1 <----------DOF2                       <----- --MYB59    ------->TEIL    ---------->DOF2  ---------->DOF2       <------ZmHOX2a(2)--------->ATHB12<   catggtttcacatgaatcccaatttcattgcaaagcataactaaaaataaagaagaagactttttggagatcgaatctgttcatgttgatgggttttggc  306500         <---------ZAT6      --------->HSFB2a(2)                          --------------->AGL15      <---------HSFC1(1)                           <---------------AGL15      --------->HSFC1(1)                           <---------DAG2      <---------HSFB2a(2)            --------->REM1(2)  <----------DOF2                 <---------ANAC46 <----------DOF2                                  - -------->At4g35610     --------->ZAT18           <-----------------AGL3           <----------DOF2 <- ----At4g35610          --------->ZAT14           <-----------------AGL2   <------ZmHOX2a(1)     <--- ---------At4g35610     <---------ZAT14---------->DOF2                 ---------->DOF2           ----   tgagctttctagagatagagctagagagtactgggtctgtgtaaagttgataactttttttggtttagagagagaaaggacagagctttacagagatgga  306600                                                                <---------WRKY45                                                                <---------WRKY38(1)                                                               <<<<<<<<<<WRKY6                                                               <<<<<<<<<<WRKY11                                                          ------>ZmHOX2a(2)                                                        --------->ARR14(3)                                                        <---------ARR14(3)                                                        --------->ARR11(3)                                                        <---------ARR14(2)                                                        --------->ARR14(2)                                                        <---------ARR11(3)                                                       <---------GLK1(1)                                                       --------->GLK1(1)       <---------At4g35610      <---------At4g35610               ------>ZmHOX2a(1)<------ZmHOX2a(2)     --------->At4g35610      --------->At4g35610               =========================HOX2a_HOX2a   <-------GAMYB<--------   <---------At4g35610        <----------DOF2        <------ZmHOX2a(1)        --------->MYB52(2) <--- --------->DOF2            ------>MYB83 ========================HOX2a_HOX2a   --------->MYB46(2) ---- --------REM1(1)           ------>MYB46(1)        <-----------RAV1(2)       <---------MYB52(1)------- ------At4g35610<---------ANAC58        ================HOX2a_HOX2a        ------------>MYB.PH3(2) ----->At4g35610<---------ANAC58  <----------DOF2<------ZmHOX2a(2)     ----------->RAV1(1)<----------   gatgaagcagatgaagtttcttactcaccaagctttcttttcctctgttcgatcaggagatcttagtcaacttcaacagttagttgacaatttaaccgga  306700                                                                                                    <                                                                                             --------                                                                                             --------                                                                                             ------>NtERF2                                                                                             <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                          ------>NtERF2                                                                                          <---------ATERF1(1)                                                                             --------->RAP2.3(3)    -                                                                             <---------ANAC46<-------                                                                             --------->RAP2.3(2)    -                                                                            --------->DEAR4(2)<------NtERF2                                                                          --------->DEAR3(1)---------                                                                         --------->DEAR3(2)--------->RAP2.3(1)                                  --------->ALFIN1                 <------NtERF2          --------->At4g35610                                <-----------RAV1(1)               --------->LBD16         --------->LBD16                              ----------->RAV1(2)                --------->DEAR3(1)      --------->ANAC46                              <---------At4g35610                <---------ANAC46        --------->DEAR3(1)  <---------At4g35610         --------->At4g35610               <---------LBD16         <---------LBD16  --------->At4g35610        <-----------RAV1(1)                --------->ATERF1(1) --------->ARR11(3) -LBD16                  <---------ZAT14                        <------NtERF2--------->DEAR3(1)    <- ------At4g35610         --------->ZAT14                       ------>NtERF2--------->RAP2.3(1)    <- ----->At4g35610      <---------ANAC46                        <---------DEAR3(1)    <---------ARR11(3) -->LBD16          --------->DEAR3(1)                         --------->DEAR3(1)   <---------CCA1(2)- -GT1           <---------WRKY38(1)      <---------At4g35610  --------->ANAC46------>NtERF2--------->RRTF1(1)   gatgagctaatcgatgagtcatcgccgtgttctgctgtggctgagcttatgtctgtgcaaaacgacgccggagagaccgccgtctatatctccgccgcag  306800                                   <-----------------AGL1         --------->ARR11(3)   <------MYB83 ---------ARR14(2)           <---------TOE2(3) ->At4g35610             --------->ATHB12                             <---------ETT(1) ->LBD16 <---------ARR11(3)  --------->MYB59                          --------->ANAC46 >RAP2.3(2)            --------------->AGL15                       <---------ARR14(2) >RRTF1(2)             <---------------AGL15                  <------ZmHOX2a(2)                ------ >DEAR3(1)            <---------ANAC58                       --------->ARR14(2)             --------- -------->ARR14(2)    --------->ANAC55(2)                    <---------ARR14(2)          <-----------HVH21 --At4g35610          <---------ANAC55(2)                    --------->AGP1             <-----------RAV1(1) -------->GLK1(2)     <---------ANAC58                      --------->At4g35610   <----------DOF2  -- -->RAV1(1)    <-----------GT1<------MYB46(1)            <------ZmHOX2a(2)        =================== --------GLK1(2)      <-----------------AG              --------->ARR11(3)        <---------DAG2   -- --------ARR14(1)    --------->MYB52(2)                 <---------ARR11(3)    ------->TEIL  <-------- -------->ARR11(3) <---------MYB52(1)            ----------->GT1   --------->ARR14(2) <---------AtLEC2   agaatcttgaagacatttttcgttacttgattaggttttctagtttggaaacagttaagatcagatccaaatccgacatgaacgcttttcatgtcgctgc  306900  Previous    Next  AGI:  At2g01680.1    Description:  ankyrin repeat family protein. Identical to Ankyrin repeat-containing protein At2g01680 [Arabidopsis Thaliana] (GB:Q9ZU96;GB:Q8LFC8); similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G07710.1); similar to unknown [Populus trichocarpa] (GB:ABK94575.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42355.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 306384    to: 308658    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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