Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        <---------ARR11(3) ------TGA1a                                            <---------ARR14(2) ------bZIP60(2)                                        --------->ARR11(3) ------ANAC55(1)                                        --------->AGP1 ------ANAC55(2)                                        --------->ARR14(2) ------ANAC58                                          <---------GLK1(1) ------ANAC46                                          --------->GLK1(1) ------ANAC58                                       --------------------->WRI1 ----->bZIP60(1)                                 <---------MYB52(1)                   --------->SPL7 ----->O2                                   <---------ARR14(2)                       --------->SPL1(1) ------bZIP60(1)                            <-----------GT1                          <---------SPL1(1) ----->TGA1a                                --------->ARR14(2)                      <---------SPL1(2) ------O2                                  --------->GLK1(1)                        <---------SPL7 ---->TGA1                                 --------->KAN4(1)                   <---------ABI4(2) ---->HVH21                                <---------KAN4(1)                  --------->ANAC58 -->RAV1(2)                                <---------GLK1(1)                  --------->ANAC58 -At4g35610                               ---------->TaMYB80                ---------->DOF2--------->WRKY18(1) >At4g35610<-----------GT1                <---------KAN4(2)               <---------YAB1  <----------   cgtgaatggatttttacaaatcggacactcgaacatgctcagagaatatccgttctgagatctgttcgaagacgttatgaaagcaccgtacgggtcaaac  286100                              --------->LBD16                          <---------ARR14(2)                          --------->ARR14(2)                        <---------YAB1         ------>MYB83                        --------->ICU4    <---------WRKY18(1)                                xxxxxxxx                    <-----------HVH21    --------->WRKY12                                   ---------                  --------->LBD16        --------->WRKY38(1)                                <--------               --------->MYB52(1)        --------->WRKY45                               <---------At4g35610               ------->TEIL  <---------ANAC46  ------>MYB46(1)                      --------->ANAC46              --------->ARR14(2) <---------GLK1(1)                   <------ZmHOX2a(1)<---------WRKY38(1)              <---------ARR14(2) --------->GLK1(1)           ------>ZmHOX2a(2)      --------->ANAC58            --------->ANAC58------>ZmHOX2a(2)--------->MYB46(3)   <------ZmHOX2a(1) --------->ANAC58     <XXXXXXXXXXXXXXXXXXXXMIR851-5P      ----------->HVH21   ===============HOX2a_HOX2a--------->MYB52(1) -HVH21     --------->ANAC58<---------LBD16--------->PCF2<---------YAB1      <---------GLK1(1)   ccatcttgtggagcacgaaccgggtcatgatccgggtttctcgttgacccactaatcttctgatcggaggaggataagggtttctcaggcaacggatttg  286200                                                                                                  XXX                                                                                                 ----                                                                                               ------                                                                                              -------                                                                                <------ZmHOX2a(1)----                                                                                =====================HOX2a_HOX2a                                                                         <---------ANAC46     -------                                                                       <------MYB46(1)        <------ZmHOX2a(2)                                                                       <---------MYB46(3)    --------                                                                       <------MYB83          --------                              <---------ANAC58                        <---------DEAR3(1)     --------                              <---------ANAC58                  <---------DOF5.7(2)          <-------                             <---------ZAT2                     --------->MYB52(1)           <-------               <------ZmHOX2a(1)                               <---------WRKY12 =====================  <---------ANAC58           --------->ZAT2       --------->ARR14(2)  --------->ALFIN1      <--------  <---------ANAC58    <---------ARR14(2)          <---------ARR14(2)  <---------AtMYB61>>>>>>>>>TBF1 xxxxxxxx>smallRNA(i) --------->ARR14(2)    <-----------GT1    <---------WRKY38(1)  >>>>>>>>>TBF1<--- >ARR14(2)  <---------HSFB2a(2)        <---------ZAT6   --------->ARR14(2)<---------ZAT14   <-------- -ARR14(2)  --------->HSFB2a(2)        ----------->GT1  <---------ARR14(2)--------->ZAT14  ----------   gattgggtttgggtctaggagtcggattgggagcttgggaagagttaaaccggttctgaatcgggttaacgggtggtgcagaggaagaagaagaagatcc  286300 --------->GLK1(2) XXXXXXXXXXXXXXXXX>MIR169G* ----->HSFB2a(2)                                                                  --------->TGA2(2) >ZmHOX2a(2)                                                                     <-----------TGA1 -->CCA1(2)                                                                      <-----------HVH21 ----->LBD16                                                                    --------->ANAC46 -->ARR14(1)                                                                  <---------DOF5.7(2) ->ARR11(3)                 <------NtERF2                                   --------->DOF5.7(2) ->ARR11(1)                --------->LBD16                                 <----------DOF2 ->ARR14(2)               <---------ATERF1(2)                              --------->TOE2(3) --ARR11(3)               --------->ATERF1(2)                        <---------ANAC58 --ARR14(2)               <---------HSFB2a(2)                        <---------ANAC58 =HOX2a_HOX2a             --------->HSFB2a(2)              ------->TEIL  <---------YAB1 -GLK1(1)                 --------->ETT(1)            <---------AtLEC2 <---------CCA1(2) ------HSFB2a(2)         ----------------->AGL1 <---------DAG2      <---------At4g35610 -HSFB2a(1)              <---------LBD16   <---------WOX13(1)    <---------MYB52(1)            <<<<<< ->ARR10       <----------DOF2  >>>>>>>>>TBF1   <----------DOF2 <----------DOF2<---------TOE2(3)  <<<   gagaacccgaccttggcctttgaatttgccggaagaagaagagagattgacttttttcatgaatccctttagcttatctttaacgtcatccatcttcttc  286400                                                                                             <------NtERF2                                                                                            *TSS                            <----------ID1                                                 <---------DEAR3(1)                         --------->DAG2                                                <---------AtMYB61                        ---------->DOF2                                              <----------DOF2                     <------ZmHOX2a(1)                                        ------>ZmHOX2a(2)                   <---------TOE2(3)                                        --------->ARR11(3)  <---------ANAC46 <---------TOE1(3)     <---------AHL20(2)                 <---------ARR11(3) <<<TBF1      --------->ANAC58           --------->AHL20(2)             <------ZmHOX2a(1)  <---------MYB46(3) <<<<<<TBF1   --------->ANAC58      <----------DOF2                     =============HOX2a_HOX2a   ttcttcgtgtaatctcaagctaaggaaaaagctacaaactttataaattacaaatatgtgtctgaaaaatcagaggatgatcttgttctttggtcgtcga  286500                                                                               <---------AHL20(2)                                                                              <---------WOX13(1)                                                                              <---------YAB1                                                                           <---------YAB1                                                                        --------->ICU4                                                                      --------->ATHB51                                                                      --------->AHL20(2)                                                                      --------->YAB1                                                                      <---------AHL20(1)                                                                 ------------>CBF                                                                 --------->LBD16                                                                --------->ANAC55(2)                                                                --------->ANAC58                                                 --------->AHL20(2)   <---------ICU4                                                 --------->AHL20(1)   <--------ATHB1                                      --------->ANAC58          --------->ANAC58                                    ---------->DOF2<------------CBF  <---------ATHB12               <                               ------------>CBF  <---------AHL20(2)  <---------ATHB51        <-------                      <---------ANAC58--------->ANAC58          <---------ANAC55(2)     <----------DOF2          <---------MYB46(3)  --------->ANAC46  --------->AHL20(2)   --------->ICU4    <----------DOF2 <----------DOF2      <---------ANAC58<----------ID1            <---------ANAC46       <---------DAG2   agacttttgtgtttgttctgttttgcttctcttcgcaattaagccaaaaaaaaaattgacctcgttgcgcaataattttgattaatgggccttttgggcc  286600                            <---------YAB1                         --------->ICU4                       <---------ICU4                       --------->ATHB51                      --------->ICU4                  ----------->RAV1(1)                 --------->ANAC58                     --------->YAB1             <---------ANAC58                         <---------ICU4 --------->YAB1 --------->ZAT18                       --------->ATHB12           <-------TEIL <---------ICU4 <---------ZAT18          <----------DOF2                      --------->CCA1(2) --------->ATHB12--------->ANAC58        ------>ZmHOX2a(1)                   <---------ARR11(3) -------->ATHB1 <---------ZAT14 <---------AHL20(2)    -------->ATHB1         --------->ARR11(3)     - ---------ATHB12--------->ZAT14<---------WOX13(1)    <---------ATHB12      ----------->ARR10 -------- ---ID1      <---------ANAC58  <---------YAB1 <----------ID1         <---------ZAT18  <----------DOF2   aaatcattgtatattcagtgcgccataattttgattaatggtccttttgggccaaatcattgtatattcaatgcgcttagatatacatctttgctaaaag  286700      --------->YAB1      <---------AHL20(2)      -------->HAHB4      -------->ATHB1      <--------HAHB4      --------->ATHB51      <---------ICU4                                                 <----------ID1      <---------CCA1(2)     <---------ATHB51                                        --------->AHL20(2)   --------->ZAT6     --------->ICU4                                      ---------->DOF2         <---------ZAT18     <---------YAB1                                   --------->ANAC58           --------->ZAT14 ---------->GT1                                       --------->ANAC58    --------->ANAC58 -->DOF2<---------YAB1        <----------DOF2<---------ICU4----------->GT1--------->ANAC58         <-   ccttgtaattattaataccaccaagtatgtttctttgggtaatctcatattggcccaagtaaagttaataaacaacaagcctttgcactacatatctaat  286800                                                                           --------->AHL20(1)                                                                           <---------AHL20(1)                                                                           --------->ARR11(3)        <---------AHL20(2)                                       <----------DOF2  <---------DAG2              --------->YAB1                  <-----------GT1    <-----------GT1 ----  <----------DOF2          --------->YAB1               <---------TOE2(3)  <---------ARR11(3)<------ZmHOX2a(1) ----------GT1           <---------TOE2(3)            ---------->DOF2<---------At4g35610    ---------   ttgactttattttttggagttttatttaagaataatagtatctaagaccacaaaaaaaaaggtttttctttatctgatatatttttctgtatgcaggaaa  286900                                                        --------->ICU4                                                        <---------YAB1                                                      --------->YAB1                                          <----------DOF2--------->ATHB12                                        --------------->AGL15                                        <---------------AGL15                                     --------->ZAT6  <---------YAB1           <---------AHL20(2)        <-----------GT1 --------->ICU4           --------->AHL20(2)      <-----------GT1<---------MYB46(3)         --------->CCA1(2)   <---------TOE2(3)   <--------P               <-----------------AGL1        --------->ARR11(3)   <---------TOE1(3)   <---------WOX13(1)       ----------------->AGL1 ----->AHL20(2)             ---------->DOF2     <-------GAMYB   <---------KAN4(2) -->GT1 <---------ARR11(3) <---------AHL20(2)  <---------MYB46(3)   ------->TEIL                  ---   aaaataagaagatataaatgaaattgtatttaaagtttatcactctttttggttgatgatgatgggaatgaactcgtccaactttggaaaatgtagtttt  287000  Previous    Next  AGI:  At2g01650.1    Description:  PUX2 (PLANT UBX DOMAIN-CONTAINING PROTEIN 2); nucleic acid binding / zinc ion binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO42345.1); contains InterPro domain UBX (InterPro:IPR001012); contains InterPro domain PUG (InterPro:IPR006567) Range:  from: 284671    to: 286492    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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