Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <------NtERF2                                                       <-----------RAV1(2)                                                      ------>NtERF2                                                      <------NtERF2                                                      --------->LBD16                                                     --------->RAP2.3(2)                                                     --------->DEAR3(1)                                                     ----------->RAV1(1)                                                    --------->RRTF1(1)                                                    --------->ATERF1(1)                                                    --------->RAP2.3(1)                                                    --------->RAP2.6(1)                                                    <------NtERF2                                                   <---------ATERF1(1)                                                   --------->ABI4(1)                                                   ------>NtERF2                                                  --------->DEAR3(1)                                                  <---------ATERF1(2)                                                  --------->ATERF1(2)                                                  --------->RAP2.3(2)                                                  --------->RAP2.3(3)                                                 --------->RAP2.6(1)                                <---------ARR14(2)<---------DEAR3(1)                                --------->ARR14(2)--------->ANAC46                            <------NtERF2        --------->ERF1                          <---------ANAC58       --------->DEAR4(2)                          ===========================bZIP_DOF                          <---------DEAR3(1)     --------->ATERF1(1)                          <---------ANAC58       --------->RRTF1(1)                  <---------ANAC58                <---------At4g35610              --------->RAP2.3(1)                 <---------ANAC58        <---------ANAC58  <---------ANAC46       --------->ORA47(2)                --------->ARR11(3)        <---------ANAC58  <---------TGA1a        <------NtERF2                     <---------ARR11(3) ------->ARR11(3)  --------->At4g35610          <---------ORA47(2)        <---------MYB52(1) --------ARR11(3)------>ZmHOX2a(2)              <---------RAP2.3(1)     <---------ANAC58 ---->DOF2      --------->At4g35610             <---------ATERF1(1)     <---------ANAC58       ------ >HSFB2a(2)    <---------ARR11(3)         ---------->DOF2 <------ZmHOX2a(1)<-------TEIL      -------- -HSFB2a(2)<---------ANAC46 --------->ATERF1(1)<---------DEAR3(1)    <-----------GT1 <---------ANAC46   agctcttctagcgtcgtgatctgctctggcgtcggattccatctcaaagtcgccgccgcaggaatgttgtttttccgttcatcaatatcgtgttctcctg  225800              ----------->HVH21 <---------MYB52(1)      <---------MYB52(1)       <-------GAMYB      <---------ARR14(2)      ----------->GT1            <---------AHL20(1)      --------->ARR14(2)<---------ICU4           <----------ID1     <-------GAMYB     --------->ICU4    --------->At4g35610   <---------ANAC46    <---------YAB1    <---------At4g35610 ------------>MYB.PH3(1)--------->ATHB12 ----------->RAV1(2)  <-----------GT1 >ZmHOX2a(1)--------->At4g35610<---------RAP2.6(3)       --------->AHL20(1) --->RAV1(2)<---------At4g35610--------->At5g28300      --------->YAB1   atgatgcggttatgagctgatggtgatcattgccgttaatatcacctgaaaaaaacaaaaatattaacacattgatatgaattaagtctataaatgaaga  225900                  <------MYB83                  <---------ANAC58                  <---------ANAC58                 --------->MYB55(2)                 <---------MYB46(3)            <---------At5g28300                                           <---------MYB46(3)          <---------YAB1                                                  <-----------RAV1(1)       <---------AHL20(2)              <---------ANAC46                 <-------GAMYB       --------->AHL20(2)          <-------GAMYB                       --------->MYB111(2)   <------ZmHOX2a(1)              <---------MYB46(3)                   <---------MYB46(3)  --------->ICU4--------->ALFIN1<------ZmHOX2a(1)--------->ALFIN1     <--------P   <---------REM1(1) <---------TOE2(3)<------MYB46(1)<---------AtMYB61  ----------->GT1<---------TOE2(3)   agtaaggattttattacagtgggtgagaagaagaggaggttgagtagtagagaggggcaaatagttgatgaggttgttgttggagatgtagcccatgcta  226000                                                                                <---------DAG2                                                                               --------->HSFB2a(1)                                                  --------->ARR11(3)      --------------->AtSPL8                                                  <---------ARR11(3)   --------->GLK1(1)                                       <-------TEIL  <----------DOF2   <---------GLK1(1)                                      --------->CCA1(2)          <---------ANAC46<----------DOF2    <                                     <---------GLK1(2)  <-----------RAV1(1)   ------->TEIL          -   tgtagaaatttgccctaataactcttaatttagagaaaagattcacaaaataggtcttttgttgttgttgtggaattccgaaccttttagctagggaaat  226100                                  --------->ALFIN1                                  <---------ANAC46          <---------ANAC58               *TSS                                <---------ANAC46 <---------YAB1                    --------->DAG2    <---------HSFB2a(2)         <----------DOF2--------->ATHB12                  ---------->DOF2 ---------ARR14(2)            <---------ZAT14  --------->YAB1               --------->At4g35610 -------->ARR14(2)            --------->ZAT14 --------->ICU4<---------ANAC58--------->CCA1(2)   <----   gggattcgagagagcaaatgctcgagtttcagtgctgtgtggaaatgaatgatgagaggtttacttgtgatgcaagagagatgaaaaggctaccaagaga  226200                                                                    ----------->HVH21                                                                  <---------TGA1a                                                                  --------->TGA1a                                                                  --------->O2                                                                  <---------O2                                                                 <-------MYC4                                                                 ------->MYC2                                                                 <-------MYC2                                                                 ------->MYC3                                                                 <-------MYC3                                                        <----------DOF2     <---------ANAC58            ------>ZmHOX2a(1)      ====================bZIP_DOF     <---------ANAC58    <----------DOF2             --------->GLK1(2)                         ------    <---------LBD16     <---------DAG2     >>>>>>>>>GATA-1     ------->TEIL                   <------   <-----------GT1 <----------DOF2  <-----------TBP  <---------ARR11(3)          <-----------TBP --------CBF   <---------ZAT14---------->ID1         --------->ARR11(3)         ------->TEIL  -------   ttgtttttcgggtctactatactttgccttttgtcctgttttatagataaaccaaaatctttatgcacatgtgacatatatgtatatatagagagagata  226300                                                  <---------ANAC58                                                  <---------ANAC46                                                  <---------ANAC58                      --------->ATHB12                            --------->YAB1      <---------YAB1       ---------->DOF2   <---------YAB1     --------->ZAT6 <---------WOX13(1)       <---------YAB1       <------ZmHOX2a(2)  <---------ICU4 --->CCA1(2)       <---------ANAC58        --------->YAB1        <---------ARR11(3)  --------->YAB1 ---ARR11(3)       <---------AtLEC2        <--------HAHB4        --------->ARR11(3) --------->ICU4 -->ARR11(3)       <---------ANAC58       <---------YAB1     <---------AtLEC2--------->ICU4   tacacttacactcttgtacttgcttgacaatagaaataacatgtattattatgcgtataatttgcaagatcaaaaggaaatgagtaaacatgatttcaat  226400                                                   <---------TOE2(3)          <---------DAG2                           <---------YAB1          <----------DOF2                      --------->YAB1   --------->ANAC58                       --------->AHL20(2)   --------->ANAC58                --------->AHL20(2)   <------NtERF2                   <---------AHL20(2)  ------>NtERF2                   --------->AHL20(2)  --------->LBD16                 <---------AHL20(2)                        <---------DAG2 <---------ANAC58          --------->ANAC46    <---------ICU4               <----------DOF2 <---------ANAC46      <-----------GT1  ----------->GT1                    <---------YAB1     <------ <---------ANAC58----------->GT1  --------->AHL20(1)          <---------ANAC46             <---------ARR11(3)   atggcgcgaaaactttatcgagttattacaccaaaatttaataagttaataataagattagattgggtttacgaattacttttggactatgtagaacttt  226500                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ===                                                                                                  <--                                                                                                  ===                                                                                                  ---                                          ------>MYB83                                            ---                                          ------>MYB46(1)       --------->ANAC58                  ===                                        <---------MYB59         --------->ANAC58        <------ZmHOX2a(1)                                        <---------MYB46(2)      --------->ANAC46       --------->LBD16                                     <-----------GT1    <---------ARR11(3)           <---------LBD16                                 <---------AHL20(2)     --------->ARR11(3)           <-----------RAV1(2)                                 --------->AHL20(2)    --------->CCA1(1) --------->TOE2(2)      <----                                 --------->AHL20(1)    --------->RVE1(1) --------->TOE1(2) --------->HSFB2a(1) ----DOF2                       --------->AHL20(2)   --------->AHL20(2) ----------->RAV1(2)<---------HSFB2a(1)   tgcattcttcttatcaaacaactctctcagaaaattttattaccaaacaaaaaaaaaaaatctcacaagtcacaacctgagagtgtttcaggaaaatccc  226600                            <-----------TGA1                           --------->bZIP60(1)                      <------NtERF2                    <---------ANAC46                    <---------ANAC58                    <---------ANAC58                   <------NtERF2           <---------O2<-------GAMYB        ----------->HVH21  <---------bZIP60(1)        ------>ZmHOX2a(1)  --------->ANAC55(2)   --------->DEAR3(1)------>NtERF2 --------->LBD16   --------->ATERF1(1) ------MYC3<---------TGA1a <---------ANAC58 ----->MYC3====================MYC_MYB ------MYC2--------->O2<----------DOF2   <---------ZAT2<---------ARR14(2) ----->PIF5=======================bZIP_DOF          --------->ANAC58 ----->MYC2--------->ANAC46<---------ANAC58         --------->ANAC58 ------PIF5--------->TGA1a <---------ANAC46         --------->ANAC46 ------>TGA1a     <---------ATERF1(1)    --------->At4g35610 -------ALFIN1    <---------DEAR4(2)     <---------At4g35610 ------>ANAC58   --------->ALFIN1<---------ICU4    <---------LBD16 =================================bZIP_DOF       --------->ZAT18  <----------DOF2 -------TGA1a    <---------DEAR3(1)     --------->ANAC58      <---------ZAT18 ==============================MYC_MYB  --------->ANAC58    --------->ANAC46        ----------->RAV1(2) ------>ANAC46  --------->ATERF1(1)     ------>NtERF2  --------->ARR14(2)    --------->ARR14(2) ------>ANAC58--------->LBD16   --------->ICU4   <---------WRKY38(1)         <---------ARR14(2) ====================bZIP_bZIP  <---------YAB1   <---------ZAT14  <---------DAG2--------->ANAC46 -----ALFIN1<---------LBD16<---------ANAC55(2)   <---------WRKY12 ===================================   acgcgcggtcctcacgcgggaggcgcgttgcgtcataatcgccagctatagtccacggatttaggccactttttagcaaaatccacaactgagcccaata  226700  Previous    Next  AGI:  At2g01500.1    Description:  PFS2 (PRETTY FEW SEEDS 2); transcription factor. Identical to WUSCHEL-related homeobox 6 (WOX6) [Arabidopsis Thaliana] (GB:Q9ZVF5); similar to WOX1 (WUSCHEL RELATED HOMEOBOX 1), transcription factor [Arabidopsis thaliana] (TAIR:AT3G18010.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59842.1); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 224155    to: 226191    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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