Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ------>NtERF2                                                                  --------->HSFB2a(1)                                                                  --------->HSFC1(2)                               --------->CCA1(2)                  --------->At4g35610                              --------->ARR14(2)                  --------->ZAT2                              <---------ARR14(2)                  <---------HSFB2a(1)                              <---------ARR11(3)                  <---------HSFC1(2)                     <---------ZAT6                               <---------At4g35610          <-----                 <----------DOF2           --------->CCA1(2)     --------->GLK1(2)             <-----          --------->ANAC58    --------->ARR11(3)            ---------->DOF2      <---------------AtSPL8          --------->ANAC58 <------ZmHOX2a(1)           ----------->GT1     ---------->DOF2--------->ATHB12   tacattttgtgaacgcaggctttgtgttaggagatatgtagagagagacggacaagggggagaaaagaagctgccctaaaagttttgtacattgatttgg  220800     --------->ATHB12                                            --------->YAB1    <---------YAB1                                <---------AHL20(2)<---------GLK1(2)               <    <------ZmHOX2a(2)                             <---------YAB1<---------YAB1                      -   <---------ARR11(3)                 --------->ATHB12        --------->YAB1                   ------   --------->ARR11(3)      <----------DOF2 ----------->GT1    <---------ICU4     <----------DOF2    < -MYB46(1)            <----------DOF2 --------->YAB1       --------->YAB1  <---------YAB1      <----- -MYB83          <----------DOF2     <---------YAB1     <XXXXXXXXXXXXXXXXXXXXMIR418   <----------DOF2   ttagagatcattgtctcttcttttcttttcttttctctgatcatagggttttttaattgtttcatcatcatattcttatgattcttttctttcacaagat  220900         --------->YAB1      <---------ANAC58                                         <-----------GT1   <-----------GT1           <---------ANAC58                                     <---------AHL20(2) ---------AHL20(2)      <---------ICU4                                           <---------AHL20(2) -------->AHL20(2)  <---------AHL20(2)                                           --------->AHL20(2) --->ARR11(3)   <---------AHL20(2)      <---------ANAC58                         <---------AHL20(1) ---------ICU4  --------->AHL20(2)      <---------ANAC46                         --------->AHL20(1) ----ARR11(3)  --------->AHL20(2)       <---------ANAC58     ---------->ID1  <---------AHL20(2)   aattttttcaatagtgatttaattcatttttgcttcttccagtcgtgttcatgtttttcatttgttcttatatcagttttaaatttattcacttcatgta  221000                                                                                               <-----                                                                                               <-----                                                                <---------AHL20(2)            =======                                                         ------>MYB46(1)                <---------ANAC58                                                         ------>MYB83                   <---------ANAC58                          --------->MYB46(3)        <-----------GT1        --------->ANAC46   -------                        ----------->RAV1(1)  ---------->DOF2------>ZmHOX2a(1)     ---------->DOF2----            --------->REM1(1) ------------------------>ANAC81<---------TOE1(2)    ===================   caatggggtttgcttcatctctaatccaacaaatacaaacaaacaaaaaaagaatcaccttcctagtttatttctatgcgctacttaagcgcgtgagaaa  221100        ------->MYC3        <-------MYC3        <-------MYC2        ------->MYC2        <-------PIF5        <-------MYC4        ------->MYC4                                               <-------PIF5        ------->PIF5                                               ------->PIF5       <---------TGA1a                                             <-------MYC3       <---------O2                                                ------->MYC3       --------->O2                                                <-------MYC2       --------->PIF3(3)                                           ------->MYC2       ==========================bZIP_DOF                         <---------ANAC58       --------->TGA1a                                            <---------ANAC58       <---------PIF3(3)                                        <---------ANAC58     <---------ALFIN1                                           <---------ANAC58   <------ZmHOX2a(2)                                           --------->ZAT18  --------->ARR14(2)               --------->ZAT14             <---------ZAT18                     <-  <---------ARR14(2)              ----------->RAV1(1)         --------->ALFIN1                     <- ----------AtSPL8                --------->ANAC46           --------->ALFIN1                       <- ----------AtSPL3     <----------DOF2                    --------->DAG2                       <------ ================bZIP_DOF      --------->ANAC46         ---------->DOF2                      -------- --->DOF2--------->ALFIN1    ------>NtERF2          --------->ANAC58                        --------- ----->TOE1(2)    <---------GLK1(2)<---------ZAT14  --------->ANAC46         ---------->DOF2<-------- ================bZIP_DOF    ----------->RAV1(1)    --------->ANAC58--------->ALFIN1        <--------   gtacgatccacgtggaactagcttctttcgccaacacaacacagagtttggctcacgaaaaagtgtgcgcgtggggaagaaaagggtctcatatataatt  221200 <---------ZAT6 ----------->GT1 --------ANAC58                                                                           ------>NtERF2 --------ANAC46  <----------DOF2                                  <---------MYB46(3)      --------->LBD16 --------ANAC58  <---------DAG2                                   <------MYB46(1)        --------->LBD16 ------CBF      <---------DAG2                                    <------MYB83           <---------LBD16 ->ATHB12     ---------->ID1                 *TSS ----------->RAV1(1)           <---------YAB1 >AHL20(2)   <---------WRKY18(1)            --------->ANAC46  <-----------RAV1(1)       <---------LBD16 -AHL20(2)   <-----------GT1         <----------DOF2     --------->AHL20(2)    <-----------GT1  <---- -YAB1      ----------->HVH21   <-----------GT1  --------->MYB46(3)          <---------YAB1<------NtERF2   ggagtgtaaaatgtttgacctttttgtttgggtttatctcttttagactcaacaacagataaatttgttggtttcaagtattatcaatttcccggcgaaa  221300                                           <---------ZAT2                                           --------->At4g35610                                           --------->ZAT2                                 --------->ANAC58                                 --------->ANAC58     <-----------GT1                        <---------MYB52(1) <---------At4g35610                       --------->LBD16  <------ZmHOX2a(2)                                     <------          --------->CCA1(2)      --------->ANAC46    <-----------GT1                        ---------  ----------->RAV1(1)<---------LBD16   <---------ARR11(3)                                   --------- --------->ANAC46   --------->MYB52(1) --------->ARR14(2)                                   --------- -----ARR11(3)    --------->MYB46(3)   <---------ARR14(2)            --------->MYB52(2)    ------>ZmHOX2a(1)   tctccaccagagttatgggaatcaccggaagtctaacgccagatcagctcgattttttccactctcaaggtttgtttctctgaaatttcattcctcgtaa  221400                                                                    <------MYB83                                                                    <------MYB46(1)    <---------YAB1                                                 --------->MYB59 ---CCA1(2)      --------->ARR11(3)                             <---------ARR14(2) >TOE2(1)       --------->ATHB12                          --------->DAG2 >ANAC46       --------->ICU4                --------->CCA1(2)  --------->ARR14(2)                  - >TOE1(1)    --------->YAB1               ----------->GT1---------->DOF2                     <------ZmHOX2a(1)   ctctctatgaatgaagaatgattttgtaattcaattcaatggaatggatataaaaaaaaaaaagggtatttggtaatcgaatcgttcgcgagtgaggatg  221500                                                       --------->ARR14(2)                                                    <---------ANAC58                                                    <---------ANAC55(2)                                                    <---------ANAC46                                                    <---------ANAC55(1)                                               <---------MYB46(3)                                              <---------WOX13(1)                                             >>>>>>>>>ARR2                                            --------->ATHB12 <---------CCA1(2)             <------ZmHOX2a(1)  <---------ANAC58    <---------ANAC58           <---------TOE2(3)    <---------ANAC58    --------->ANAC55(2)  --------->AtMYB61           <---------TOE1(3)    <---------ANAC46--------->KAN4(2)      ----------->RAV1(1)    <------ -------->CCA1(2)  <------ZmHOX2a(1)       <---------YAB1  ------>ZmHOX2a(1)---------->DOF2<---------   agataagaggcttaaggaagaggatggatgagttgcttaatcagtttgattgttccgtctcctctatcttctccaccaaaaatcaggtttttatttcttt  221600                                <---------YAB1                                  <-----------GT1                              ----------->GT1                                <---------ICU4                         --------->YAB1                    <---------HSFB2a(2)  <---------AHL20(2)                        <---------YAB1                  <---------YAB1----------->RAV1(1)                      <---------ICU4                 <---------YAB1   --------->AtMYB61                     <---------YAB1                  --------->ICU4--------->ANAC58            <-----                   <---------ICU4            <---------MYB46(3)    --------->ANAC58            ------                   --------->YAB1           <--------P<---------ICU4 --------->ANAC46        -------- ----DOF2        <---------ARR11(3)       <---------MYB46(3)       --------->ANAC46          <------- --GT1  <---------YAB1--------->YAB1--------->YAB1<---------YAB1  --------->ZAT18     <----------DOF2   accaaaggttttgattcaaaatcatcatcatattgttataagaatggttgttttgattattgtagaagcacaccacagataattacttctttgagagcgc  221700  Previous    Next  AGI:  At2g01480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G14970.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77011.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42288.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49921.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 216721    to: 220988    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g01490.1    Description:  phytanoyl-CoA dioxygenase (PhyH) family protein. similar to unknown [Populus trichocarpa] (GB:ABK94889.1); contains InterPro domain Phytanoyl-CoA dioxygenase (InterPro:IPR008775) Range:  from: 221245    to: 223417    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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