Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <----------DOF2                                            <---------HSFB2a(2)                                     --------->CCA1(2)                                 <----------DOF2                                    <---------ARR11(3)                               --------->ZAT2                    <---------YAB1  --------->ARR11(3)                      ------>MYB83 --------->ATHB12            <---------GLK1(2)     ----------->ARR10        >>>>>>>>>TBF1    ------>MYB46(1)<---------WOX13(1)    <---------GLK1(2)  <----------DOF2      --------->HSFB2a(2)   <-----------GT1    <---------ZAT2   caagaagattgtcagaatatttatgctttgaacgataagatatgttccagactttggagaagaagaaattactcaacctacagaaccagcttgattgatc  198800                                                 ------->TEIL                                                 --------->MYB52(1)                                    --------->ARR11(3)           ------>MYB46(1)          <---------ARR11(3)           ------>MYB83           --------->ANAC58 <---------MYB59         <---------MYB59   ------->GAMYB      --------->ANAC46                                     --         --------->TOE2(3)<---------MYB52(2)  --------->ANAC58                                     --       -------->P         --------->MYB46(3)  --------->ANAC58                                     <-   --------->ANAC58  --------->ANAC46     ------>ZmHOX2a(1)                   --------->ZAT2       --   --------->ANAC58 ------->GAMYB --------->ANAC58----------->RAV1(2)         <---------ZAT2       --   --------->ANAC46--------->MYB46(3)--------->GLK1(1)             --------->ARR14(2)         ------- ---------->DOF2   <---------MYB52(2)<---------GLK1(1)<---------GLK1(2)------>ZmHOX2a(1)    ---------   aacaaaagcaacctaatttcaacaaacaacaaacacaagaactcctacaagtacctgattctgttccagtttcctctctgagcttggattacaatgacac  198900                           <-----------GT1                           --------->YAB1 ------->ANAC58         --------->YAB1 ------->ANAC46     --------->ZAT6 --------ANAC55(2) --------->ZAT14                              --------->HSFB2a(1)               --- ------->ANAC55(2) <---------ZAT14                        --------->LBD16                    <------- ------->ANAC58   ----------->RAV1(1)           <---------ICU4  <---------HSFB2a(1)        --------->ATHB12 -->ZAT6         --------->ANAC46              <---------AHL20(2)                         <---------YAB1 >YAB1         --------->AtMYB61               --------->AHL20(2)                ---------->DOF2>>>>>   tacgcaatcttctactaccacaacactaataacaacatttcaaaaccaaaaaattacatcagggaaacgttctacgactacgaagaagcaccatgataga  199000                                                                                                   <-                                                <------NtERF2                                    ----                                               ------>NtERF2                                  <------                                               <---------RAP2.6(3)                           --------                                              <---------ATERF1(2)                            --------                                              --------->DEAR3(1)                             <-------                                              --------->ATERF1(2)                            --------                                              --------->ANAC46               <----------DOF2 ========                                              --------->RAP2.6(2)            ========================                                              --------->RAP2.3(3)           <---------ANAC58 --------                                              --------->RAP2.3(2)           <---------ANAC58 --------         <----------ID1                      --------->ERF1  <------ZmHOX2a(2)               <------- ------>AHL20(2)                             --------->RAP2.3(1)        <---------ANAC58     -------- --WOX13(1)                                 <---------ATERF1(1)         <---------ANAC58     -------- >>>>GATA-1          --------->AtLEC2    <---------At5g28300<---------ARR11(3)               <-------   taaaatacaaggggacgagtaccatgctacagggtgatagagtcactgccgccattggaagagatcaaaacatagcttgcttcaagtctacagacacgtc  199100 --------ATHB12 ----->WOX13(1) -----HVH21 ->ANAC58 ->ANAC46 --ANAC55(2) ->ANAC55(1) ==================================bZIP_DOF                 --------->GLK1(1) ==bZIP_DOF                                                <---------ARR14(2) ->bZIP60(2)  <---------WOX13(1)              ----------->GT1                              --------->ARR14(2) ->TGA1a    --------->ATHB12 <---------ARR14(2)            --------->ARR14(2) --------->TOE1(3) --O2 --------->At5g28300 <---------TOE2(3)  <---------TOE1(3)             --------->ARR14(2) ->ANAC58  <---------AHL20(2)--------->ARR14(2)           <------ZmHOX2a(1)<---------ARR14(2)  ------ ->O2----------->GT1    ---------->DOF2      <---------TOE2(3)    --------->LBD16          <---------ARR14(2) --TGA1a  <---------WOX13(1)<------ZmHOX2a(1)--------->MYB59<---------GLK1(1) --------->TOE2(3)------   aatcgagcggtaattgattgatcaaacaaaggattcgaattgggttttaggttaataagaggaactccctgagaagggaacctcaaattccaagttcctg  199200             <---------TOE2(3)             <---------TOE1(3)                                                                  <----   --------->ARR14(2)                                                                           <---- --------->ANAC58         ----------->HVH21                                 ---------->ID1     <----- --------->ANAC58       <----------DOF2                              <---------AHL20(2)        ------ >ZmHOX2a(1)---------->DOF2                    *TSS              ----------->GT1     --------->HSFB2a(2) --->LBD16  <---------DOF5.7(2)  <----------DOF2            <---------REM1(2)        <---------HSFB2a(2)   agcacgattcgagttaaagttggagtctttgacaactttgtgagagtgagagagagagggactacaagggtttaatttgtcttatttctacaagagttaa  199300                       <-----------GT1 -----TOE1(3)       <---------ICU4                               --------->YAB1 -----TOE2(3)   --------->AHL20(2)                              <-------TEIL ----DOF5.7(2)  --------->YAB1                      <---------AHL20(2)                              < ---->DOF2 ------------>CBF                    ------->TEIL ------>ZmHOX2a(2)                ------->TEIL   agttggagtcttggacaattaaaaattactcattttgagttttttcatgtatgtttatttgatcgattcatagtccaagtttgaatttgtttatgaactc  199400                                                                                                    <                                                                                                  ---                                                                                        <---------AHL20(2)                             <---------GLK1(2)                                      <---------------AGL15                 <---------YAB1                      <---------ANAC58               --------------->AGL15                <---------ARR11(3)                   <---------ANAC58               =================              ----------->GT1--------->ARR11(3)    <---------YAB1                <---------ARR11(3) -  <---------ICU4--------->ARR11(3)       <---------ARR11(3)              <---------ARR11(3)      ---- ---------ARR11(3)       ---------->DOF2 --------->ARR11(3)              --------->ARR11(3)  --------   aaaatcatttcttatgaagataatagcaaaagattatgcaaaagattttagttttgcttgctattgtttattgtagatatcaacatctaatttaagtaaa  199500          <-------TEIL         <--------P                                                          --------------->AGL15      --------->MYB59                                                        <---------------AGL15      <---------TOE2(3)       --------->AHL20(2)                            ----------------->AGL3 --------->ATHB12            <---------AHL20(1)                             ----------------->AGL1 ---------YAB1               --------->ARR11(3)                           --------->GLK1(2) ------>YAB1                 <---------ARR11(3)                      --------->ANAC46               > ============================================================================================MADS_MADS -------->ICU4         --------->YAB1                                --------->ANAC58      ---------- ----->ICU4      ----------->GT1<---------AHL20(2)                   --------->ANAC58--------->At4g35610 ->AHL20(2)     <---------TOE2(3)      ------->TEIL                --------->ANAC46  <---------At4g35610   tgatgatttaggtagattgtggtaataagaatatatatatgaatttcaagttccaagagaaaccattacacacgagattccaatatgagcagagagtaag  199600                                                                                    <---------At4g35610                                                                                    --------->At4g35610                                              <---------YAB1                     --------->At4g35610                                            <---------ICU4             <---------ATHB12                                            --------->YAB1           --------->WOX13(1)   >>>>>>>>>TBF1       --------->YAB1      --------->ICU4           --------->MYB46(3) >>>>>>>>TBF1   --------->REM1(1)  <------ZmHOX2a(1)        <---------At4g35610  <---------At4g35610 ->GT1     ----------->GT1      <-----------RAV1(2)         --------->At4g35610 --------->MYB52(2)  -   aagaagaagaagagagttacaacaatgaaaacactcaggagagacatcatgatacaataggcagaacacaacaatcaatggtttgctgctaaacaacttg  199700  Previous    Next  AGI:  At2g01440.1    Description:  ATP-dependent helicase. similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT3G02060.1); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT3G02060.2); similar to hypothetical protein OsJ_007844 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24361.1); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:IPR014001); contains InterPro domain DNA helicase, ATP-dependent, RecG; (InterPro:IPR004609); contains InterPro domain DNA/RNA helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain Range:  from: 193700    to: 199247    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g01450.1    Description:  ATMPK17 (Arabidopsis thaliana MAP kinase 17); MAP kinase. Identical to Mitogen-activated protein kinase 17 (MPK17) [Arabidopsis Thaliana] (GB:Q84M93;GB:Q9ZVF9); similar to MPK9 (MAP KINASE 9), MAP kinase [Arabidopsis thaliana] (TAIR:AT3G18040.1); similar to ATMPK15 (ARABIDOPSIS THALIANA MAP KINASE 15), MAP kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G73670.1); similar to double HA-tagged mitogen activated protein kinase 9 [synthetic construct] (GB:ABG54336.1); similar to double HA-tagged mitogen activated protein kinase 17 [synthetic construct] (GB:ABG54344.1); similar to mitogen-activated protein kinase 9 [Brassica napus] (GB:AAU95462.1) Range:  from: 199511    to: 202305    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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