Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->LBD16                   <---------ANAC46                   <---------ANAC55(2)                   <---------ANAC58                   <---------ANAC58                  --------------->AtSPL3                ------------------>SPL14                --------->ARR14(2)                <---------ARR14(2)              <---------HSFC1(2)              --------->HSFB2a(1)              <---------HSFB2a(1)              --------->HSFC1(2)              <------MYB46(1)              <---------DEAR3(2)              <------MYB83             <---------TOE2(2)             <---------TOE1(2)              ------>ZmHOX2a(2)          <---------ANAC58                 --------->GLK1(1)          <---------ANAC46                 <------ZmHOX2a(2)          <---------ANAC58                <---------ARR14(2)       --------->TOE2(2)                  --------->ARR14(2)           --------->At4g35610        ---       --------->TOE1(2)         ----------->RAV1(1)                   <---------ZAT14          <----      <---------HSFB2a(1)      <------ZmHOX2a(2)                       <---------At4g35610     ------     --------->GLK1(2)<-------TEIL  ------->GAMYB----------->HVH21    --------->ALFIN1  <---------YAB1   attagagaacctgcgtaggttccgtacatggcgatcaacagagggatccccatgacaagagtgtttgggagagtgctgagagagaagattgtgatcatcc  182900                                                                                  ---------->DOF2                                                                                <------NtERF2                                                                               ------>NtERF2                                                                              ----------->HVH21                                                                              --------->DEAR3(1)                                                                              <---------DEAR3(1)                                                                             --------->RAP2.3(1)                                                                             --------->ATERF1(1)                                                                             <------NtERF2                                                                            <---------ORA47(2)                                                                            <---------ATERF1(1)                                                                            ------>NtERF2                                                                            <---------RRTF1(1)                                                                            <---------DEAR4(2)                                                                            <---------RAP2.3(1)                                                                            <---------ERF1                                                                            <---------RAP2.6(1)                                                                           <---------DEAR3(1)                                                                           --------->DEAR3(1)                                                                           <---------ATERF1(2)                                                                           --------->ATERF1(2)                                                                           <---------RAP2.3(3)                                                                           <---------RAP2.3(2)                                                                          --------->ATERF1(1)                                                                          <---------ABI4(1)                                                                          --------->At4g35610                                                                          <---------At4g35610                                                                          <------NtERF2                                                                         <---------ORA47(2)                                                                         <---------RAP2.3(1)                                                                         <---------ERF1                                                                         <---------RRTF1(1)                                                                         <---------ATERF1(1)                                                                         <---------DEAR3(2)                                                                        <---------DEAR3(1)                                                                        <---------DEAR4(1)                                                                        <---------RAP2.6(2)                                                                        <---------RRTF1(3)                                                                        <---------RRTF1(2)                                                                        <---------RAP2.3(2)                                                                        <---------RAP2.3(3)                                                                        <---------DREB2C(2)                                                                        --------->ETT(1)                                                                        <---------At1g77200           <---------MYB52(1)                                           <---------ANAC46       <---------At5g28300                                             --------->RAP2.6(3)       --------->MYB52(1)                                              --------->DDF1               <       -------->P                                                     <-----------HVH21            <-    --------->ZAT2              ---------->DOF2                       --------->ARR14(2)           <-   --------->ANAC58  <------MYB83                                     <---------ARR14(2)           <-   --------->ANAC46  <------MYB46(1)                --------->YAB1 <---------ANAC46          <-------TEIL   --------->ANAC58 --------->MYB59                --------->ICU4  <---------ANAC58       --------->GLK1(1) ------>ANAC46      --------->MYB46(2)           --------->YAB1    <---------ANAC58      <---------ARR14(2) -----ALFIN1      <---------MYB52(1)  --------->ANAC58--------->ICU4  --------->REM1(2)  --------->ARR14(2) --->MYB46(3)   <---------MYB46(3)    --------->ANAC58<---------YAB1 --------->ALFIN1--------->At4g35610   actccaagctaccgttcttggttaggttagcccatagagcaagtaagacgagcatgatgattttttgaagcgtgtcggcggcgacgaagcggaaattcat  183000            <------MYB46(1)            <------MYB83            <---------MYB46(3)           <---------AtMYB61           <---------DEAR3(1)          <---------MYB52(1)         <-------GAMYB        <---------MYB46(3)        ===================================HOX2a_HOX2a        ==============================HOX2a_HOX2a                                                   -        --------->ATHB12                                                                         ----        ------>ZmHOX2a(2)                                                                        ----      --------->ARR14(2)                                                                         ----      <---------ARR14(2)                                                      <---------ZAT14    <---      --------->ARR11(3)            <------ZmHOX2a(1)               <---------MYB46(3)           <---      <---------ARR11(3)       <------ZmHOX2a(1)                   <--------P --------->ZAT14    <---     <------ZmHOX2a(1)   --------->ALFIN1               <----------ID1      <------NtERF2        <--- ---------SPL7         <---------ANAC46       <---------------------WRI1 <---------LBD16        ----- --------ANAC58        <---------bZIP60(2)    <------NtERF2       <-------GAMYB         --------->At4g35610 --------ANAC46   --------->At4g35610       <---------DEAR3(1)   <---------MYB46(3)     <---------At4g35610 --------ANAC58   <---------At4g35610      --------->SPL7   ---------->DOF2--------->LBD16      -----   ggcgtaaggatcgttggtggagatgaagtggaaggagaggagagggacggcgaagatagcgacgaagcggttgatgccggagcactggtctggtgagaat  183100            --------->SPL1(2)           --------->SPL1(1)          <---------ZAT14          <---------SPL7          --------->ZAT14                                                                   ---------       <------------------SPL14                                                             <--------      <---------ALFIN1                                             <---------DEAR3(1)      <---------ATHB12      --------->AtMYB61                                <---------DEAR3(1)                  --------->ICU4     --------->MYB46(3)                                --------->ANAC46                    <---------YAB1    >>>>>>>>>>>>>>>>>LFY        --------->YAB1        <---------LBD16  --------->ZAT14--------->ANAC58 ---------------------->TaNAC69(2)          --------->DAG2   --------->ALFIN1         <---------ANAC55(2) ----->ARR14(3)               --------->GLK1(2)      <---------ALFIN1  <---------ZAT14--------->ANAC58 ----->ARR14(2)               <-----------ARR10--------->ALFIN1   <---------ORA47(1)  --------->ANAC55(2) ----->ARR11(3)       <---------DEAR3(1)   ---------->DOF2  <------NtERF2             --------->bZIP60(2) ------ARR11(3)     --------->LBD16     --------->ANAC58  <---------DEAR3(1)          --------->ANAC55(1) ------ARR14(2)    <---------ANAC46     <---------ANAC55(2)<---------DEAR3(2)         --------->ANAC46 ------ARR14(3)   ------>ZmHOX2a(2)     --------->ANAC58  <---------ANAC46     <---------ANAC58 --------ARR10   <------ZmHOX2a(2)      <---------ANAC46 <---------ABI4(1)  --------->ANAC46<--------HAHB4 ---->CCA1(1)   <---------ARR14(2)      --------->ANAC55(2)<---------MYB46(3)  <---------ANAC58     < ---->RVE1(1)   --------->ARR14(2)     <-------TEIL--------->SPL7<------ZmHOX2a(1)    --------->O2<--   atcttccaccactgtacggatccgtaggcgagaatcatagctacgtaaagtggtaccacggcggtgaggacggtgtacaagtcgtgccacgtaatcattt  183200     --------->MYB55(2)     <---------MYB46(3)    <---------MYB55(1)    <--------P    --------->ALFIN1   <---------MYB52(1)      <<<<<<<<<<<<<<<<<LFY  --------->LBD16       <---------At4g35610                                                     <---- >YAB1<------MYB83      --------->At4g35610                                                ---------- -ICU4<------MYB46(1)<---------ZAT6                                 <--------P  --------->YAB1------- ---------LBD16  <---------ZAT14                                  <---------ANAC46    ---------->DOF2 ---------GT1    --------->ZAT14                                  ----------->GT1  --------->YAB1   tttccggtgggttttggagtttagtgagaagacagtggcatttgagggggaattagaaggaagaagaggggtagaatgggaagaataataaagaaaccgt  183300                                                                                              -------                                                                                              <------                                                                                            <--------                   --------->ATHB12                                                        --------->At4g35610                  --------->ICU4                                                         <---------ICU4                  <---------ATHB12                                                    --------->YAB1           --------->ZAT14                                                            <---------ICU4           <---------ZAT14                 <------ZmHOX2a(1)                         <---------YAB1           <-------TEIL                   --------->ZAT18                          <---------ICU4       <---------------AtSPL3             <----------ID1                           --------->YAB1       <---------------AtSPL8 <---------ARR14(2)                                  <---------YAB1       --------->DAG2         --------->ARR14(2)                                --------->bZIP60(1)      ---------->DOF2         <---------GLK1(2)                                 <---------bZIP60(1) -----MYB52(1)    <---------YAB1  <---------ANAC46      <---------TOE2(3)   >>>>>>>>>SUP --------->YAB1 -->MYB.PH3(1)  --------->YAB1--------->ARR11(1)  <---------AHL20(2)   ----------->HVH21<---------YAB1 ---->GT1  --------->ZAT18 *TSS--------->ARR14(1)<-----------TBP <---------TOE2(3)--------->ICU4   taagagagaaaagtacagtaatgatttacaaggattcggtgaagaggactaatttatagaggtttttgaggcagtgacagtgtcatcatcatcatcagca  183400                                                                     ------->PIF5                                                                     <-------MYC2                                                                     <-------MYC3                                                                     -------->ABF1                                                                     ------->MYC3                                                                     <-------MYC4                                                                     ------->MYC2                                                                     ------->MYC4                                                                     <-------PIF5                                                                    <---------bZIP60(2)                                                                    <---------TGA1a                                                                    --------->O2                                                                    --------->TGA1a                                                                    --------->ANAC55(2)                                                                    <---------O2                                                                    <---------ANAC55(2)                                                                    ========================bZIP_bZIP                                                                    >>>>>>>>>>AtMYC2                                                          <---------ANAC58          --------->ALFIN1                                                          <---------ANAC58         <-------MYC3                          <---------ICU4           <---------ZAT14  >>>>>>>>>>HY5  ------->MYC3     <---------ANAC58     <---------AHL20(2)    <---------ANAC58    >>>>>>>>>>ABI5 ------->MYC2     <---------ANAC58     --------->ATHB51      <---------ANAC46   ------------>OsbHLH66     <---------ANAC55(1)  <--------ATHB1        <---------ANAC58 ---------------->PIF3(2)     <---------ANAC46  --------->YAB1       ================================================bZIP_DOF     --------->ANAC55(2)  --------->AHL20(2)==================================bZIP_DOF <---------ANAC46     <---------ANAC55(2) --------->ICU4     <----------DOF2     ----------------->PIF3(1)         --- -->At4g35610        <---------WOX13(1)    <---------ANAC58    ----------->HVH21   <-------MYC2   <-- ---At4g35610     <---------YAB1           <---------ANAC58 --------->ALFIN1      <-----------RAV1(1) -ICU4        <---------TOE2(3)    <---------AHL20(2)     <---------ANAC46        <---------TGA1a<---   cacgattacgttttttaagtttgattaataatttgatttaaaatggctttgtgtgtagttgagtggggacacgtggcaaatcgcatgtggggggagtttt  183500        --------->ALFIN1       <-------PIF5       ------->PIF5      <---------ANAC46      <---------ANAC58      =======================================bZIP_DOF      <---------TGA1a      --------->TGA1a      --------->O2      <---------O2                                          --------->DAG2      <---------bZIP60(2)                                  ---------->DOF2      <---------ANAC58                                 <----------ID1                 ---------->DOF2   ----------->HVH21              <----------DOF2      <---------YAB1           <---------DAG2 ------>HSFB2a(2)                 <---------DAG2       <---------ANAC55(2)      <----------DOF2 -------HSFB2a(2)            <---------ANAC58   --------->TOE2(3)           <---------ZAT18 ------LBD16                 <---------ANAC58   --------->YAB1             <-----------GT1     ------   ctggagggacgtggacagttttatggaatagtcgtgcttttttgctactatcttattacgaaaaagtggtcttgtttttgcactttttgaaagttgcaaa  183600                            <---------ARR14(2)                            ------->TEIL                            --------->ARR14(2)                       <---------At5g28300   --------------->AGL15              --------->TOE1(2)             <---------ANAC58           <---------ARR14(2)               <---------ANAC46        <---------ANAC46   <---------CCA1(2)<---------ANAC58   <----------DOF2    <-----------GT1------>ZmHOX2a(2)                                             -- ---->DOF2 --------->ARR14(2)    ----------->HVH21                <---------YAB1                -----   aggaactttggcgaatactacgaattactgtatctgtgatcgtttttcttgtaaatgtaatttgagttttgattccaaatagaatcaaactattgtctac  183700                                                                 --------->ANAC58                                                           <------MYB46(1)                                                           <------MYB83                                                          --------->MYB59              --------->AHL20(2)                                                          --------->MYB111(1)          --------->AHL20(1)                           <---------ICU4                 --------->MYB46(2)    <-------GAMYB                          --------->ICU4          <---------YAB1 --------->ANAC46      <---------AHL20(2) ----->TEIL              --------->AHL20(2)       --------->ICU4 --------->ANAC58<---------MYB52(1) ---->ANAC55(2)    ----------->RAV1(1)<----------ID1  <---------ZAT6   <-----------RAV1(1)     ------   gtacttggtacaagaagacagccacataaaaattacaagaagaacaaatgtcattagtgttaggtccaagccactgttggaccgttgaattaattacaca  183800  Previous    Next  AGI:  At2g01420.1    Description:  PIN4 (PIN-FORMED 4); auxin:hydrogen symporter/ transporter. Identical to Auxin efflux carrier component 4 (PIN4) [Arabidopsis Thaliana] (GB:Q8RWZ6;GB:Q9M7Q6;GB:Q9MAS3); similar to PIN3 (PIN-FORMED 3), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT1G70940.1); similar to PIN7 (PIN-FORMED 7) [Arabidopsis thaliana] (TAIR:AT1G23080.3); similar to PIN7 (PIN-FORMED 7), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT1G23080.1); similar to efflux carrier, pin2 [Brassica juncea] (GB:CAC67457.1); similar to efflux carrier of polar auxin transport [Brassica juncea] (GB:CAC24691.1); similar to efflux carrier, Range:  from: 180104    to: 183327    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version