Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->TOE1(2)                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 <---------ARR11(3)                                                                            <---------ANAC46                                                                           ------>NtERF2                                                                           <---------LBD16                                                                           <---------At4g35610                                                                           --------->At4g35610                                       <---------TGA1a                  <---------At4g35610  --------->REM1(1)                    <---------O2                  <---------ATERF1(1)<------ZmHOX2a(1)  <---------bZIP60(1)             ----------->ARR10            --------->RAP2.6(3)=============HOX2a_HOX2a  --------->bZIP60(1)         --------->HSFB2a(2)             --------->MYB52(1) --------->ARR11(3) -  --------->bZIP60(2)         <---------HSFB2a(2)            --------->ANAC46--------->LBD16     ---- <------NtERF2                --------->LBD16                ----------->HVH21  <---------GLK1(1)<--- ----->NtERF2                <---------LBD16          <------ZmHOX2a(1) --------->At4g35610      ---- ------->ETT(2)             <---------LBD16           ====================================HOX2a_HOX2a ->ATHB12                --------->ATERF1(1)        <-----------------------TaNAC69(2)<---------TOE1(2) --HVH21                <---------ATERF1(1)    <------ZmHOX2a(1) ------>NtERF2  --------->GLK1(1)<--- --TGA1               ---------->ID1 --------->CCA1(2)===================================HOX2a_HOX2a-   ggcgacatcacgagcgatgtcttcgtcgtctccgggaagagacgggagaggagagaggaatacacgacggcctccgctgcggagatcgtaggaggctagg  176000                                   --------->ANAC58                                   --------->ANAC46                              --------->ARR14(2)                                               <-----  <---------ZAT14         <---------LBD16                     <---------DOF5.7(2)            --------  --------->ZAT14  <------NtERF2<-------TEIL                 <---------WRKY45 <---------ARR14(2) ----------->HVH21--------->RAP2.6(2)          <------NtERF2 <---------WRKY38(1)           <---------LBD16 -------->ANAC58  ------>NtERF2--------->CCA1(2)             <---------WRKY12<------ZmHOX2a(1)<------ ----->ZAT18     <---------ATERF1(2)         <---------DEAR3(1)              ======================== ------ZAT18     <---------DEAR3(1)--------->ANAC58       <---------ZAT6     ======================== ----->ZAT14     <---------RAP2.6(2)        --------->ATERF1(1)  ------->GAMYB--------->ARR14(2) ------ZAT14  --------->ALFIN1<---------ARR14(2) <---------MYB46(3)  ----------->HVH21<---------GLK1(1) -------->ANAC58 --------->ATERF1(2)       <---------ATERF1(1)--------->MYB52(1)   <---------ZAT18<--   gcactgaagggagggagaggcggcaaactctggatacaggcaaggagacggcgattagtagagtcaacggcgagaccgaggatagtggagttctccggta  176100                                                                        --------->DEAR3(1)                                                            <---------MYB46(3)                                                           <---------DEAR3(1)      ------>ZmHOX2a(2)                                 <---------RAP2.6(2)    --------->ARR14(2)                    --------->ANAC58<---------At4g35610    <---------ARR14(2)                    --------->ANAC55(2)  --------->REM1(2) ---P<------ZmHOX2a(2)                    <---------ANAC55(2) --------->ALFIN1                     -- ->LBD16       <---------TOE1(3)          --------->ANAC58--------->At4g35610                     <-- ---MYB52(1)   <---------TOE2(3)      <------NtERF2     <---------RAP2.3(2)                      ---- ===========HOX2a_HOX2a             <---------ANAC46    <---------DEAR3(1)------>MYB83           <--- ============HOX2a_HOX2a            <---------DEAR3(1) <---------LBD16 --------->DEAR3(2)   <-------- -------ARR14(2)                  <-----------HVH21   <-----------RAV1(1) ------>MYB46(1)--------->PCF5   gatcgagatcggagattagggtttcgatgactccagcgtcggagacggaatgaattgtgcggctgtggagagaaccgactagaaaatgctggtcccttgg  176200                                                              <---------DEAR3(1)                                                             <---------LBD16                                                          <XXXXXXXXXXXXXXXXXXXXXMIR472                                                       <---------ARR14(2)                                                      <-------GAMYB                                                     <---------MYB46(3)                          <---       --------->MYB52(2)                           <---------RAP2.6(2)                          <---     <--------P                                     <---------ANAC46                           <-----  <---------TOE1(2)                              --------->ALFIN1                      <------ZmHOX2a(1)  --------->LBD16           ------>NtERF2      <---------ANAC58                      --------->ANAC46  <---------TOE2(2)         --------->LBD16    <---------bZIP60(2) <------ZmHOX2a(1) <---------TOE1(2) <-----------RAV1(2)      <---------LBD16      <---------ANAC58  --------->ALFIN1    --------->LBD16 ---->ZmHOX2a(2)   <--------P     ------>ZmHOX2a(2) <---------DEAR3(1)              <-----------RAV1(2) ----ZmHOX2a(2)   --------->REM1(2)            <---------ANAC46 <------NtERF2       --------->HSFB2a(2) ----->ARR14(2) --------->LBD16  <------ZmHOX2a(2) <------NtERF2--------->ATERF1(1) <---------HSFB2a(2) ------ARR14(2)<---------ANAC46 <---------ARR14(2)------------>AtMYB77     --------->YAB1     ------- -ANAC46      <---------LBD16<------NtERF2     <---------O2  --------->At4g35610    <---------LBD16   atcccaggttagtccctccgggtagagtcccggcgatcggaagttgataacgtggcggttatcggcggaggagggaatcagaagtcccaggaacaagacg  176300                                     --------->ALFIN1                                   <---------ANAC46                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                         <---------ARR11(3)                         --------->ARR14(2)                                                   -------                         --------->ARR11(3)                                                  <-------                         <---------ARR14(2)                                                <---------ICU4                         <---------AGP1                                              <------ZmHOX2a(1) ---NtERF2               --------->GLK1(2)                                  <-----------------AGL1 ------------------WRI1 <------ZmHOX2a(1)          ------>NtERF2   <---------At4g35610     --------->YAB1 ----DEAR3(1)          --------->HSFC1(2)       ------>NtERF2 <----------DOF2      <---------TOE2(3) -->RAP2.6(3)          <---------HSFC1(2)      --------->DEAR3(1)  --------->At4g35610    --------->ICU4   gcgaagagaattgggaagacgaagaaggatctgtatcgagtggaagacgacgacgacatgttcgctttcatctgtgatttcgatttaggaaaataatgaa  176400                                                                                            <--------                                                --------->ANAC58                      ----------->GT1                                                ------>MYB46(1)                     --------->REM1(2)                                                ------>MYB83                     <---------ANAC46                                          ----------->HVH21                      <---------ANAC58                                        --------->CCA1(2)                        <---------ANAC58                                       --------->ARR11(3)               ----------->RAV1(1)--------->AHL20(2)                                       --------->ARR11(1)               <---------ALFIN1<---------ZAT6        --------->HSFB2a(2)            <---------ARR11(3)            --------->ANAC46 <---------ANAC46      *TSS              <---------------------WRI1        --------->ANAC55(2)    <---------ANAC55(1) -->ATHB12   --------->AHL20(2)    ---------->DOF2       <---------TOE2(3)       <---------AtLEC2  <- --YAB1 <---------HSFB2a(2)     ----------->TBP --------->ANAC58 --------->MYB52(1) <---------ZAT14--   tggctcatttttagaaaaaataaaacttcgatgtataaaaagatatgaccaagcccatttatgtaataaacgggccacattttgcgtgtagtataaaata  176500                                                                                          <---------ICU4                                                                                         --------->ICU4                                                                                         <---------ATHB12                                                                                        <---------TOE2(3)                                                                                       --------->YAB1                                                                         --------->ATHB12<---------YAB1       ----------->GT1                                                  <---------AHL20(2)--------->ATHB12      --------->DAG2                                                   <----------DOF2 <---------ICU4     ---------->DOF2                                         --------->ZAT14     <------NtERF2 <----- -AHL20(2) --------->ATHB12       --------->ALFIN1           <---------ZAT18     <---------At4g35610 --------ZAT18           --------->ATHB12      --------->DAG2<---------ZAT14     <---------ZAT2<----- ------->PCF2         --------->TOE2(3)       ---------->DOF2--------->ZAT18     --------->At4g35610   gggcccataaagtttattggccttccttcatttgctgtgttgatgtcaaaaagagaagagtagtgcattgctgttttattggcagctactaatgatttgg  176600                                                                         <----------DOF2                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                            --------->ZAT14                          --------->GLK1(1)                     <---------O2                                    <---------GLK1(1)                     --------->O2--------->ZAT14               --------->ATHB12 <---------At4g35610 <---------TGA1a                           --------->YAB1    ----------->GT1 -MYB46(1)           --------->TGA1a--------->ANAC46          <---------ATHB12<-----------GT1       < -MYB83              --------->ANAC46              <-----------HVH21 <---------CCA1(2)    --------->TOE2(3)   ttttgctgatgggctcttaatagacgtctctccactataccctatacttagactatcagggcgaatcatggatatctttgttactgtaatattcttaaat  176700              <---------ARR14(2)              --------->ARR11(3)                              <-----------GT1             <---------CCA1(2)     <----------DOF2           <---------YAB1        <----------DOF2          <------NtERF2            <---------YAB1       <---------DAG2           <---------DEAR3(2)        <---------AHL20(2)    <---------ALFIN1           <---------DEAR3(1)         --------->AHL20(2)                    -----  --------->TCP16(2)          <---------ORA47(1)       <----------DOF2              ----------->GT1-- --------->PCF2              <-----------HVH21        --------->TOE2(3)         --------->AHL20(2) xx -----------TCP11(1)    --------->WOX13(1)         <-----------GT1         ----------->GT1 --------->AHL20(2)   ataggcccacctttcaaatcttgaatcaatcggtcggctttttaggcccaaataaacctttttattactagaccaaaatgaaaaaaatgtcaaaaaaatc  176800                  ----------->GT1                                                              <-----                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                             ----------->GT1                <---------At4g35610             <---------YAB1                --------->AHL20(2)   <-       <---------AHL20(2) --------->TOE2(3)    --------->AHL20(2)             <---------AHL20(2) ----      --------->AHL20(2) ----------->GT1       <---------AHL20(2)            <---------YAB1  --------      <---------AHL20(2) <---------ANAC55(2)  --------->YAB1               --------->YAB1    <xxxxxxx ---->YAB1      --------->At4g35610          <---------YAB1               <---------YAB1    <-------- ------->AHL20(2)----------->GT1        ----------->GT1               <---------DAG2        <-------- xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->YAB1                     <----------DOF2 <---------AHL20(2)   ataaatttttaaatttgaagcggaaaaacgtaaactttcaaaatgttattaaaattctaaagtttagtttgactttattataaattagttaaatttgatt  176900  Previous    Next  AGI:  At2g01410.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G16760.1); similar to unknown [Populus trichocarpa] (GB:ABK92493.1); contains InterPro domain Six-bladed beta-propeller, TolB-like (InterPro:IPR011042) Range:  from: 175039    to: 176406    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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