Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ANAC58                          <-------                                                   --------->ANAC58                          <-------   ----------->RAV1(1)                        --------->ANAC58 --------->ZAT14              <-------- -------->ANAC58                     ===========================HOX2a_HOX2a                <---------ANAC46 -------->ANAC58                    <---------ARR11(3)   <------ZmHOX2a(1)              <---------MYB52(1) ----NtERF2                         --------->ARR11(3) --------->ANAC58                <---------RAP2.6(3) ----->LBD16                       <---------GLK1(1)--------->ZAT2              --------->ANAC58 ----LBD16            ---------->DOF2<------ZmHOX2a(2) --------->ANAC58         --------->ANAC58   -- ->DEAR3(1)     <-------TEIL--------->ATHB12  --------->ANAC58 <---------ZAT14  --------->ANAC46-----   ggaagcaacaattcgaagtccatcgaaagaccattggagatcatcgacacgaccagcaaggactctgaactcgttcttcagcacgaagccgttgtgcgtt  160500                                                                          ------->GAMYB                                                                     --------->DOF5.7(2)                                                                     --------->At5g28300                                                                 --------->MYB52(1)  ---------->DOF2                                             --------->ANAC58 --ANAC58                                                   <---------ANAC46 --ANAC58                            <------ZmHOX2a(2)      <---------ANAC58 -ZAT18                    <---------LBD16      <---------MYB52(1)  ------->GAMYB            <------- ------->LBD16             --------->At4g35610 <-------GAMYB<---------ANAC58                --------- ---->SPL7--------->ZAT6   <---------At4g35610 <---------SPL7 --------->ANAC58              ---------   ccccaaacgcgaacagtaccagagacatcagcggaagcgatccattcgccgttgggagagtagcgagcaacggtaacagcatagccatgttcgccgtaaa  160600                           --------->LBD16                                                          <                          <---------HSFB2a(2)                                                       -                          <---------ANAC46                                                         --                         <------NtERF2                                                             <-                         <---------LBD16                                                          ---                       <---------ARR14(2)                                                         <--                       --------->ARR14(2)                                                        ----                      --------->ATERF1(1)                                                        <---                     <---------ATERF1(1)                                              --------->ARR11(3)                    <---------DEAR3(1)        <-------GAMYB                           <---------ARR11(3)                   --------->ATERF1(1)        --------->At4g35610                    --------->GLK1(1)                   <------NtERF2             <---------MYB46(3)                  --------->DEAR3(1)--                 <---------DEAR3(1)        ------>NtERF2             <---------ARR14(2)          ----                 <---------ANAC46         --------->DEAR3(1)         --------->ARR14(2)          ----                <------NtERF2            <---------RAP2.6(2)      --------->ETT(1) <------NtERF2 ---- --MYB52(1)     <---------LBD16         --------->At4g35610       <---------ANAC46--------->LBD16<--- >At5g28300   <---------DEAR3(1)        --------->RAP2.6(3)      <-----------------AGL1<------ZmHOX2a(2) >LBD16       --------->ALFIN1          <---------At4g35610      <------NtERF2  <---------LBD16  <---   cttggacgtcttggagttggcggaggctccggatgaagacagagcggccgttgcagtagagaatggtgtcggatttggaatcgccggagatcaaaatgcc  160700         <------MYB46(1)         <---------ANAC46         <------MYB83        --------->MYB55(2)        <---------DEAR3(1)        <---------MYB46(3)        --------->MYB52(2)        --------->MYB46(2)       --------->SPL7      <---------MYB52(1)     <---------SPL7   <------NtERF2  <------------------SPL14 ------NtERF2 ----->NtERF2 ------->DEAR3(1)                                                        --------->GLK1(2) --------ATERF1(1)                                                      <---------ARR14(2)         <x ------>ATERF1(1)                                                      <---------HSFC1(2)<-----------HVH21 ----NtERF2                              <---------HSFB2a(1)           <---------HSFB2a(1)        <<< ----->ATERF1(1)                         --------->HSFC1(2)         <------ZmHOX2a(1)   <---------ANAC58 ------At4g35610                       <------ZmHOX2a(1)         <--------P             <---------ANAC58 ---->NtERF2                      <---------HSFB2a(2)          <------MYB83            --------->ZAT18 ----->LBD16  <---------ANAC46 --------->ARR11(3)              <------MYB46(1)        --------->ALFIN1 ----->At4g35610        --------->ANAC58 <---------HSFC1(2)    <---------MYB46(3)   <---------ANAC58 -->NtERF2 --------->ALFIN1---------->DOF2      --------->DEAR3(1) <------MYB46(1)  <---------ANAC58 ------ATERF1(1)        --------->ANAC58----------->ARR10  --------->ATHB12   ----------->HVH21 <---- ------LBD16<---------MYB46(3) <---------ARR11(3)  <---------ANAC46<------MYB83    <------ZmHOX2a(1)   gcggcctcgttcggtggagggaacacaaggaaaggtctcgaggagtttcgccatcgtggaattgttggtaggaagaatcggtgaaggagtgcgtcatttc  160800                                                           <------MYB83                                                           <------MYB46(1)                                                          --------->ALFIN1                                                         <--------P          <<<<<<<<<TBF1                                  *TSS        <-----------GT1       <<<<<<<<<TBF1     <---------At4g35610             --------->ALFIN1    <<<<<<<<<TBF1  <<<<<<<<<TBF1                     <---------TOE2(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <---------TOE1(3) <<<<<<<<<TBF1  <<<<<<<<<TBF1                 <------ZmHOX2a(1)--------->ARR14(2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <------ZmHOX2a(1)   <---------ARR14(2) <<<<<<TBF1  <<<<<<<<<TBF1     <------ZmHOX2a(1)    --------->MYB52(1)     <-------TEIL --------------------ANAC81 <------ZmHOX2a(1)----------->GT1<---------ANAC46                       <-   ttcttcttcttcttcttcttcttcttcagaggaggagaaagtttaggaggaaattaagggttggggattttgaacgattcatcaaacatttgctaatttt  160900                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                <----                                                                                              <------           <---------ETT(2)                                                                   -------           --------->ETT(2)                                                                   -------   --------->ZAT2                                                                            --------   ----------->RAV1(2)                                                                       <-------   <---------ZAT2             <---------DAG2                                           --------->ATERF1(2)   <---------At4g35610        <----------DOF2                                          <---------ATERF1(2)   --------->At4g35610   --------->DEAR3(2)                 <---------MYB52(1)        --------->DEAR3(2) <-----------RAV1(2)   <-----------GT1                     <-------GAMYB             ------->TEIL <-- ----------HVH21   <------------CBF             <---------TOE2(3)----------->GT1   <---------ZAT14<--   gagtcagctgatgtcgagagacattgtaccggctttttctggtctggtttgatgttttttcggttattagttaaatcacaaatactgaaccggcagtggt  161000         <------MYB46(1)         <---------MYB46(3)        <---------AtMYB61    <---------ANAC58    <---------ANAC58    <------MYB46(1)    <------MYB83    <---------ANAC46   <------MYB83   <------MYB46(1) <<<<<<<<<MYB98 <--------P -------GAMYB -----MYB83<--------P -----MYB46(1) --------ANAC46 -------MYB46(3)                                         <----------DOF2 ----P  --------->MYB59                                <---------------AGL15 ---MYB46(3)                                      <----------DOF2 -->MYB55(2) <------MYB46(1)                     --------->MYB52(2) -->ATHB12<-------GAMYB                         <-------TEIL      -------->P ->ALFIN1<------MYB83                       <---------TOE1(2)  --------->At4g35610      --------->MYB59 --AtMYB61<---------ANAC58                  <---------TOE2(2)  <---------At4g35610  <---------MYB46(3) ----MYB46(1)<------MYB83                  ------>ZmHOX2a(1)   --------->ZAT2     <---------ANAC58 ----MYB83<---------ANAC58            <----------DOF2  --------------->AGL15      <---------ANAC58   tgggttgggtttggttgggccatagcccatagctaaatctctttcctaggttctttgctcttttcagctaccaattctcttctcgcttgttaggcctggc  161100                <---------ARR11(3)                --------->ARR11(3)                --------->AHL20(1)        --------->MYB52(1)                                    --------->YAB1        ------>MYB83                     <---------AHL20(2) --------->AHL20(2)                -------        ------>MYB46(1)                --------->YAB1      <---------AHL20(2)            --------->ATHB51      <---------MYB59             ----------->GT1         --------->AHL20(2)            <---------YAB1   <-----------GT1              ---------->DOF2   ----------->GT1--------->MYB52(1)     <---------AHL20(2)   caaataaaccaaactgaatatatcaaacccaaaccaaagtaaaataatcgaactgaaaaatttaaaataactgaatgaatactaaattctataattgaaa  161200                                                        <---------AHL20(1)                                                        <---------AHL20(2)                                                        --------->AHL20(1)                                                   --------->LBD16                 --------->AHL20(2)                                                  --------->ANAC46              <---------ICU4                                               --------->ARR14(2)              <---------AHL20(2)                                               <---------ARR14(2)              <---------ATHB51                                              --------->RVE1(1)                --------->AHL20(2)   -            --------------->AtSPL8            --------->CCA1(1)       <---------------AGL15----------            --------------->AtSPL3            <---------GLK1(1)    <-----------GT1 <---------AHL20(2)          --------->ARR14(2)            ------->GAMYB   --------->AHL20(2)     --------->ICU4      --  ---------->DOF2  <---------ZAT14   --------->MYB52(1) <---------ARR11(3)  <---------AHL20(2)     <- --->DOF2 <---------ARR14(2)        <---------GLK1(1)   --------->ARR11(3) --------->AHL20(2)     ---   gaactaaagtcgaatcggtactataccgaaatatttggataaccgaaaatatccgaaatatattagttatttctatattaaataattaaaaatatgtgaa  161300          --------->YAB1                                                              xxxxxxxxxxxxxxx          ----------->GT1                                                           --------->ANAC58       --------->YAB1                                                               --------->ANAC58      <---------AHL20(2)                           >>>>>>>>>RAP2.2                ---------->DOF2     --------->AHL20(2)                          <---------ARR11(3)    --------->ANAC46  <---------AHL20(2)                             --------->ARR11(3)    --------->ANAC58  --------->AHL20(2)                    <---------ARR11(3)          --------->TOE1(2) xxxxxxxxxxxxxxx -------->AHL20(2)                      --------->ARR11(3)        <---------------AtSPL3 ->GT1<---------YAB1                   --------->RVE1(1)   --------->MYB52(1)   <---------YAB1 ------->AHL20(1)            --------->MYB52(1) --------->RVE1(1) --------------->AtSPL8       ------ --------AHL20(1) <---------AHL20(2)   --------->CCA1(1)--------->YAB1 --------->ANAC58     <-------- ------>AHL20(2)--------->YAB1  ------->GAMYB   --------->CCA1(1) <---------------AtSPL8    ---------   atatatatataatagtaaaaataatcgaaaataaccgaaaaatatctgaaatatctaaaaataactgaaatgtacgaaaattttgaaagcaaaataaccg  161400  Previous    Next  AGI:  At2g01330.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G18060.1); similar to WD40-like [Medicago truncatula] (GB:ABE80134.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68164.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 158276    to: 160857    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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