Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------ANAC55(2)     --------->ANAC55(2) -->ZAT2 -->O2 ---At4g35610                                                       --------->YAB1 ---ZAT2                                                      --------->ANAC58 ---O2                                                        --------->ANAC46 -->TGA1a                            --------->TOE1(3)        --------->ANAC58 -->At4g35610        <---------YAB1 ----------->GT1          <---------LBD16   ---------->DOF2 ---->RAV1(2) --------->MYB46(3)    <---------ANAC46      --------->CCA1(2)--------->ANAC58 ---TGA1a    -------->P            <---------TOE2(3)     --------->ARR14(2)--------->AtLEC2 -ALFIN1    --------->WOX13(1)    <-----------GT1        <---------ARR14(2)--------->ANAC58    ------   gagaatcacataatcaaccaattctgattcggctattaacgtgaaattggaaagactaatatacgcgcaatcgaaacatgcaaaaggagaagaaatgtgc  157800                                                             --------->SPL7                                                           ----------->HVH21                                                           <---------SPL7               <---------ANAC58                                                          --------->MYB46(3)            <---------ANAC58                                                         <---------At4g35610     --------->DEAR3(1)                                                         --------->At4g35610  --------->DEAR3(1)                                                         <---------LBD16      --------->AtMYB61                                                       <-----------GT1        <---------ALFIN1                                                     <-----------HVH21       <---------MYB55(2)                               --------->At4g35610--------->ARR14(2)         --------->MYB46(3)           <------ZmHOX2a(1)   <---------At4g35610<---------GLK1(2)        --------->ANAC46   --------->ARR14(2)        <-----------RAV1(2)  <---------ARR14(2)       <---------ALFIN1   <---------ARR14(2)       <---------ZAT2   --------->MYB52(1)            --------->AtMYB61 --->At4g35610  --------->MYB52(1)        ------>ZmHOX2a(1)--------->LBD16--------->MYB46(3)   ------   tcaccgatttggaggacttatcggagagcgagcaggtgatgttcctccaacggattgtcaccggacgaattgaatcaccaccaccgtcttccgtctcagc  157900                                                                                  ------>NtERF2                                                                                 --------->RAP2.3(3)                                                                                 --------->DEAR3(1)                                                                               --------->ABI4(1)                                                                            <---------ATERF1(1)                                                                            ------>NtERF2                                                                           <---------ALFIN1                                                                          --------->ATERF1(1)                                                                          --------->MYB46(3)                                                                         --------->DREB2C(1)                                                                         ------>NtERF2                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                         <---------ATERF1(1)                                                                         <---------DREB2C(1)                                                                        <---------RAP2.3(1)                                                                        <---------ATERF1(1)                                                                        ------>NtERF2                                                                        --------->RAP2.6(2)                                                                       <---------RAP2.6(2)                                                                       <---------ANAC46                                                                       --------->ATERF1(2)                                                                       <---------ATERF1(2)                                                                       --------->DEAR3(1)                                                                       <---------DEAR3(1)                                                                      --------->At4g35610                                                                      <---------DREB2C(1)                                                                      --------->DREB2C(1)    --------                                                                     <---------ATERF1(1)     ------>NtERF2                                                                     <---------DEAR4(2)     ---------                                                                     <---------RAP2.3(1)    ---------             <-------TEIL                                           <---------DEAR3(1)      ---------          <---------ZAT2                                        ------->GAMYB  <---------At4g35610          --------->At4g35610                                 ------>MYB46(1)  --------->At4g35610<--          <---------At4g35610                                 ------>MYB83<---------ABI4(2) ---------          --------->ZAT2                                     --------->MYB52(1)--------->ZAT14  -----  <---------ICU4                                             ----------->RAV1(1)--------->ERF1 ------  --------->YAB1                                            --------->AtMYB61 --------->DEAR3(1)----- --------->ICU4                                            --------->MYB46(3)<------NtERF2 <---------LBD16 <---------ATHB12       <--------P  ------>NtERF2        <------NtERF2<------NtERF2        --------->RAP2.3(1) --->At4g35610      <-----------RAV1(2)    <-------TEIL  ------>NtERF2--------->ATERF1(1) <---------ATERF1(1)   gtaatcatcttcagcttcgtcttcaggtaagagagcgatgccaggtccagcgaagaggcggaccaacagagcggcggccaccgcagccagagccccgcca  158000                                                      ------>NtERF2                                                     --------->RAP2.6(2)                                             >>>>>>>>>E2Fd                                             >>>>>>>>>E2Fc                                            ------>NtERF2                                            --------->LBD16                                      --------->GLK1(1)                                      <---------GLK1(1)                                     --------->ARR11(3) --------->AtMYB61                   <---------ARR11(3) ->LBD16                         ---------->DOF2---------->DOF2 >ANAC58                      --------->At4g35610 --------->DAG2 >ANAC58                    --------->SPL7 <<<<<<<<<<E2Fa >DEAR3(1)                <---------SPL7  <---------LBD16 --------->ICU4 -------ALFIN1            <-----------HVH21--------->ANAC58                               <---------ANAC46 >ANAC46   --------->At4g35610<---------At4g35610---------->DOF2          <-----------HVH21 ->NtERF2  <---------At4g35610<------NtERF2--------->ANAC46      <---------CCA1(2)        <---------ANAC58 --->DEAR3(1) ------>NtERF2 --------->ZAT18--------->ANAC58--------->ATHB51    ----------->HVH21 ------>RAV1(1)        --------->MYB52(1)>>>>>>>>>>E2Fb<------NtERF2     ----------->HVH21<---------ANAC58   acaccattccctccgatgccagaaacaacgtccgctaaagatttcccgccaaaaggcgccataatttgtatccctgtgtcagtgactcagtgtcgtcttc  158100                   ---------->DOF2                <---------ANAC46                ----------->GT1              ----------->GT1            <---------MYB52(1)             ---------->DOF2            <-----------HVH21           --------->ANAC58         ------->GAMYB           --------->LBD16              --------->ANAC58        --------->MYB46(3)         <---------LBD16            --------->SPL7              <---------ATHB12       <---------ARR14(2)          <---------SPL1(1)            <---------MYB55(2)       --------->ARR14(2)          --------->SPL1(1)           -------->P      <---------HSFC1(2)          <---------SPL1(2)            ------>MYB46(1)      --------->HSFB2a(1)         <---------SPL7               ------>MYB83  <---------ICU4     -----      --------->HSFC1(2)         <---------ANAC58            --------->AtMYB61                  <----      <---------At4g35610        <---------ANAC58            <---------MYB111(1) *TSS           -----      --------->At4g35610       --------------->AtSPL3      --------->MYB46(3)   <---------ARR11(3) <      <---------HSFB2a(1)     <---------ARR14(2)    --------->ANAC58         --------->YAB1     <----      --------->ZAT2          ------------------>SPL14      --------->DEAR3(2)--------->TOE2(3)------      <---------ZAT2          --------->ARR14(2)    --------->ANAC58        <---------ATHB12<--------   tacttggaagctccggtgaggtaaagccttcaaatccgtacgaagcaaagtaacaagtaagaaccaaccaaggctccaaacattatctcttcttctaatt  158200                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                              --------->ANAC58                                 ------                                              --------->ANAC46                                 <-----                                              --------->ANAC58     ----------->GT1             <-----    --------->TOE2(3)                    ----------->HVH21       ==================================== <-----------GT1                         --------->WRKY38(1)     ------->GAMYB                 ------ ---->ATHB51                             --------->WRKY12     ----------->RAV1(1)              <----- -----ICU4                  --------->ANAC55(2)           <---------At4g35610                  ------ ---->AHL20(2)              <---------ANAC55(2)           --------->At4g35610                  <----- -----------GT1       ------------>CBF--------->TOE2(3) --------->YAB1                         <----- -----AHL20(2)   <-----------GT1   <-----------GT1      <---------ICU4                         ====== --->ICU4  <---------AHL20(2) --------->AHL20(2)       <---------ATHB12     <-----------GT1   ------- -YAB1     --------->AHL20(2) <---------AHL20(2)<------NtERF2 --------->MYB52(1)             <-------   atttaacctttgtttaaattttccctcaatacttaattaacctttgactcggcactaatcagcacaacagagtaaatttgaccatatagatttagacacg  158300 ----->ALFIN1 ---MYC2 -->MYC2 -->MYC4 ---MYC4 -->MYC3 ---MYC3 --->TGA1a ----TGA1a ----O2                                                                              <-------GAMYB ====MYC_MYB                                              <---------AHL20(1)         ----------->GT1 --->ANAC55(2)   <---------ARR14(2)      >>>>>>>>>>>>>>>>>LFY         --------->REM1(1) ---ABF1 --------->YAB1                 --------->ANAC46  --------->AHL20(1)         --------->At5g28300 --->O2 <---------YAB1     <----------DOF2             --------->AHL20(2)           <---------MYB46(3) ----ANAC55(2)   <---------ARR11(3)     --------->ANAC58  --------->ARR11(3)        ----------->GT1 ----ANAC46      --------->ARR11(3)     --------->ANAC58  <---------AHL20(2)       <---------DEAR3(1) =====================================bZIP_DOF        --------->AHL20(2)         ------------>AtMYB77 ----->OsbHLH66  --------->ARR14(2)   ---------->DOF2 <---------AHL20(2)         <------ZmHOX2a(1) -----OsbHLH66   <---------GLK1(2)  --------->ANAC46 --------->AHL20(2)   <----------DOF2     -------   tgtgcatttcatgataagagatactcaagctttaatacaaacaagccattgtcaaattaatatatagagactacaactttcaaggacggttaaaaaaaaa  158400                                              <---------HSFC1(2)                   <---------ATHB12                                              --------->HSFC1(2)                 --------->WOX13(1)                                         --------->ANAC58                      <---------YAB1                                       --------->MYB52(1)                     --------->TOE2(3)                                     --------->MYB46(3)    <---------ARR14(2)<---------ICU4                       ----------->ARR10 --------->ANAC58  --------->ARR14(2)--------->YAB1       <--                  <---------TOE2(3)  <---------MYB52(2)  --------->LBD16  --------->WOX13(1)      ---           <-----------HVH21     <---------MYB52(2)     <---------HSFB2a(2) --------->ICU4     <-----          --------->bZIP60(2)    --------->MYB46(3)     --------->ANAC46--------->ZAT14        <-----          --------->ANAC58     ----------->RAV1(1)      --------->HSFB2a(2) <---------ATHB12   <-----          --------->ANAC46  --------->ANAC58  --------->HSFB2a(1)       <---------ZAT18    --------->ATERF1(1)     <----------ID1   <-------TEIL --------->MYB52(1)  <---------LBD16  --------->ABI4(2) <---------ATERF1(1) --->DOF2 --------->ANAC58  --------->ANAC58  <---------HSFB2a(1)   <---------DEAR3(1)    ------>NtERF2   gcttataacgacaagtcactgaggttcgatatgccacaaacgaacggaagcgtcttctccggaacttgctacggtgcaatcatcaatgaaggcgactgcg  158500                                    <---------ANAC46                            <---------ARR14(2)         --------->bZIP60(2)    <---------ALFIN1        <---------MYB52(1)         --------->ANAC46   <---------ZAT14          --------->ARR14(2)       <---------ALFIN1   --------->ZAT14         <-------GAMYB            --------->ZAT18 --------->ANAC46        <---------ANAC46           <---------ZAT18 --------->ANAC58       <---------LBD16        <---------ANAC58 --------->ANAC58    <---------ANAC58          <---------ANAC58 -------ZAT14        <---------ANAC46          <---------ANAC46 ------>ZAT14        <---------ANAC58     <---------ZAT2              --------->ANAC58 ----ANAC46         --------->MYB52(2)    --------->At4g35610         --------->ANAC58 ----ANAC58        --------->ARR14(2)     --------->ZAT2              --------->ANAC46   <-----------RAV1(1) ----ANAC58        <---------ARR14(2)     <---------At4g35610      ----------->TGA1  ------->TEIL   ttcactccaccgagatgagcgtttcttgcggttatgcgacttgaagctggcttgtccacttcatatacaatgacgcaagtgtctatggaccctgtggcta  158600                                            --------->ALFIN1                           <---------ALFIN1                   --------->ANAC58        --------->REM1(2)                          --------->ZAT18                   --------->ANAC58       <---------ANAC46                        --------->ARR14(2)                   --------->AtLEC2     <---------ANAC58                         ---------->DOF2             ----------->HVH21          <---------ANAC46             <---------At4g35610         <---           <------MYB46(1) ----------->GT1--------->ALFIN1           --------->At4g35610      -------           <------MYB83  <---------ZAT2 <---------ANAC55(1)          ----------->RAV1(2)     <-------          <---------MYB46(3)            <---------ANAC58           <---------ALFIN1   <---------ZAT18          --------->MYB46(2)     <-----------GT1                   --------->REM1(1) --------->RAP2.6(2)   ccatcttgttgtttggtgaccatgccaagctgtttatacgagccgtgtggaacaacatgttgtttagcttcacctgcaaaacaaaaaccgcacttccagg  158700  Previous    Next  AGI:  At2g01320.1    Description:  ABC transporter family protein. Identical to White-brown complex homolog protein 7 (WBC7) [Arabidopsis Thaliana] (GB:Q9ZU35;GB:Q3EC89;GB:Q9ASR9); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G21090.1); similar to hypothetical protein OsI_000170 [Oryza sativa (indica cultivar-group)] (GB:EAY72323.1); similar to ATP-binding cassette transporter, subfamily G, member 2, group WBC protein PpABCG2 [Physcomitrella patens subsp. patens] (GB:EDQ55877.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42243.1); contains InterPro domain ABC-2 type transporter (InterPro:IPR013525); contains InterPro domain ABC tra Range:  from: 154554    to: 158181    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g01330.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G18060.1); similar to WD40-like [Medicago truncatula] (GB:ABE80134.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68164.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 158276    to: 160857    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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