Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ANAC46                                                                               ------->GAMYB                                                                              --------->MYB46(3)                                                                             --------->ANAC58             ----------->HVH21                                               <---------ATERF1(1)            <------NtERF2--------->TOE2(3)                                   --------->ANAC58            --------->At5g28300                                          --------->ANAC58          --------->ALFIN1                                               --------->ANAC55(1)       --          <---------ANAC46                                               --------->ANAC58      ------          <---------DEAR3(1)       <------NtERF2         --------->ICU4  --------->ANAC46      ------    <----------CDC5     --------->REM1(1) <---------ARR11(3)        <------ZmHOX2a(2)         <------   --------->At4g35610----------->RAV1(1) --------->ARR11(3)       --------->ARR11(3)         ------- ----TEIL<---------ABI4(1)         ------>NtERF2 <---------TOE2(1) <---------ARR11(3)      ---------- --AHL20(2)----------->GT1  ---------->DOF2      <---------TOE1(1)<------ZmHOX2a(1)      <---------GLK1(1)   tcatgggctgaggcggtgaagaggcaacatcaaaggcggacaaagatttgtccgatgtaatgaagagaggatcatacgcaagcgccattcgaaatcccga  150000                                                                            <---------TOE2(3)      <----------ID1 --------->ARR14(2)                                   ---------->DOF2 --------->GT1      <------ZmHOX2a(1)                                  <---------ANAC46 >NtERF2           <---------YAB1                                    <------MYB83 ----->RAV1(1)   --------->YAB1                                      <------MYB46(1) ---ETT(1)      <---------ATHB12      ----------->GT1                <---------ANAC46 -->ANAC46    --------->WOX13(1) --------->AHL20(2)              ------->TEIL -------------->ANAC81    --------->ETT(1)                  --------->CCA1(2)                      --   cagataaaaaaacaaacaatcaggattgtcggaaaaaaaatcgaaaattggacaagactaagagatgaatttggtgtaaaggaaaacaaaattgcagaaa  150100                                                                                      ----------->GT1                                   --------->ICU4                                ----------->HVH21                                   --------->ARR14(2)            <------ZmHOX2a(1)   ----------->GT1                              --------->ANAC58               <------ZmHOX2a(1)--------->TOE1(2)                              --------->ANAC58             <---------TOE1(2) <---------HSFC1(2)                              ----------->GT1             --------->HSFB2a(2)<---------HSFB2a(1)                            ---------->DOF2               <---------HSFB2a(2)--------->HSFC1(2)                           <------ZmHOX2a(1)              ------>ZmHOX2a(1)  --------->HSFB2a(1)                         <---------TOE1(3)          --------->HSFB2a(1) <---------TOE2(3)  --------->TOE1(2)      <---------TOE2(3)          <---------HSFB2a(1) <---------ANAC55(2) ------->MYB52(1) <---------ANAC46 <---------ARR14(2)    --------->TOE1(2)<------ZmHOX2a(1)   aaaacgaaggaagaaacgttgtggattaaggaaagcaaatatgaaatcgatgaaacgttcctaggaaggagattaaggaaccctcgacgggaaaaatgag  150200                                                                     <---------ANAC58                                                                     <---------ANAC58                                                    <---------ARR11(3)                                                    <---------AHL20(2)                                                    --------->ARR11(3)                                                    <---------AHL20(1)          <---------ARR11(3)                        --------->AHL20(1)          <---------GLK1(2)                         --------->AHL20(2)   ---------->DOF2          --------->ARR11(3)          <------ZmHOX2a(1)     <------ZmHOX2a(1)        ----------->ARR10<---------YAB1<---------AtMYB61  <---------TOE2(3)      --------->CCA1(2)  <---------TOE2(3)        ------->TEIL       <---------ANAC46            ----   ggagaaagataagatttttgagaaattaagaatgaagagaggaggtcgaatgaatatattgaggaagaatagcgtgaaagttacaaagaatgaagaatgt  150300                ---------->DOF2            <------NtERF2           --------->LBD16          <---------ANAC46          <---------ANAC58          <---------ANAC58         --------->ATERF1(1)         <------NtERF2       <---------DEAR3(1)       --------->ALFIN1     <---------MYB46(3)     <---------bZIP60(2)                                                                  ------->GAMYB     <---------ANAC46                                                                  --------->MYB52(1)    <---------AtMYB61                                                               <---------ATERF1(1)    --------->ALFIN1                                                                ------>NtERF2  <---------ANAC46                                                                 ----------->HVH21  <-----------RAV1(1)                                 >>>>>>>>>TBF1               <---------PCF2  <---------ANAC58                                 >>>>>>>>>TBF1             <---------ANAC46  <---------ANAC58   ---------->DOF2            >>>>>>>>>TBF1  --------->CCA1(2) *TSS<------NtERF2 --->TEIL<---------LBD16 ---------->DOF2     >>>>>>>>>TBF1---------->DOF2    <-----------RAV1(1)  <--   atttgtgtggtggcggagaaaagaaaagaaagtgaagactgaacgaagaagaagaagaagaaaagatagggtttgtgttttgtgggcgacaacggtctca  150400                                                                                               <-----                                                                                               ------                                                                                   <---------AHL20(2)                                                                                   <-----------GT1                                                                               <---------AHL20(2)                                                                         ------>MYB83         ------>MYB83                                      --------->PCF2<----------DOF2      ------>MYB46(1)   ----------           --------->ANAC46           <---------TCP20                    ----------->RAV1(1)<--------      <---------ARR14(2)              <---------TCP15(1)             -------->P--------->AHL20(2)      --------->ARR14(2)             <-----------HVH21    <---------AHL20(2)--------->TOE2(3) ------>MYB46(1)   <---------TOE2(3)             <-----------GT1  ---------->ID1    --------->MYB52(1)     ---------- --------DOF2            <---------MYB52(1)<---------CCA1(2)      <---------MYB52(2)     <-----------GT1   ctttcgaggttacacagacctgaattcgttttttgtttcggtcccatattttgtctttatttacataaactaacccaacatttatttacatttaccaaat  150500                                                                                          --------->AHL20(2)                                                                                          --------->YAB1                                                                                          -------->HAHB4                                                                                         <---------YAB1                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(1)                                                                                      --------->AHL20(1)                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                                --------->ANAC55(1)        <----------DOF2                                         <---------MYB52(1)    <---------AHL20(2)   <----------DOF2         <---------AHL20(1)                  --------->TOE1(3)--------->ANAC55(2) <---------MYB46(3)        --------->AHL20(1)               ------->TEIL        <---------ANAC55(2) ----ARR14(2)    <---------ICU4                            <---------ALFIN1    ------->TEIL --->ARR14(2)   <---------YAB1            <----------DOF2--------->ANAC58  <---------------AtSPL3 ------->AG     <---------ATHB12     <----------DOF2     --------->ANAC58  --------------->AtSPL8   - -MYB59 <---------DAG2     <---------ARR11(3)         ----------->HVH21    <---------------AtSPL8   < ------->AGL1   --------->ICU4--------->GLK1(2)<----------DOF2 --------->TOE2(3)--------->ANAC58  ---   cggtgcttcactttccccatgattcccaaaatattctgtcttttcttttcttttttctgacgcacccttaatttttgtttgtacgtaattaattatagag  150600                                                                             --------->ARR11(3)                                                                             <---------ARR11(3)                                                                    ----------->RAV1(1)                                                                   --------->ANAC46                                                                 ------->GAMYB ------>ZmHOX2a(2)                                                                 --------->TOE2(3)            <---------YAB1                                       --------->AtMYB61 --------->TOE2(3)                                              --------->MYB46(3)  --------->AHL20(2) ---------->GT1         ----------->GT1                        -------->P  <---------YAB1 ---------ANAC46     <---------ZAT2                           --------->WOX13(1) ------>ZmHOX2a(1)--- ------>MYB52(1)     --------->At4g35610                 --------->ICU4 --------->ICU4          -----   taacgtttaaaaatatgaatgggagctagaaaaactatagacaccgttcacaaaatgaaattatcaaccacaacatgatgatcctattaaaaacaaaaac  150700                                  <---------ARR14(2)                                  --------->ARR14(2)            <---------ANAC58     <---------GLK1(1)            <---------ANAC55(2)  --------->GLK1(1)            <---------ANAC58 ------>MYB83               --------->TOE2(3)            --------->ANAC55(2)--------->YAB1        <-----------GT1                  --------->YAB1       --------->ATHB12    <---------MYB59       --------->YAB1                       <---------ICU4       <---------ICU4   >>>>>>>>>>WRKY43         --------->AHL20(2)                  <---------YAB1<-      <---------YAB1    >>>>>>>>>>WRKY38        --------->ICU4                       <---------AHL20(2)      --------->ICU4    <-----------GT1         <---------YAB1                     --------->YAB1  <-   --------->ICU4       >>>>>>>>>>WRKY26      --------->YAB1                    <----------DOF2    -- ------>ANAC46    <---------AHL20(1)         <---------AHL20(2)         --------->ANAC58           -- ---->ANAC46<---------ANAC46 ------>MYB46(1) <---------YAB1             --------->ANAC58        -----   acaacatgatgattacgtagtatatttgaccaaacatatccgaatgtataattataaacctcatttaagttatcaagaaacacttttataattagatgta  150800                                                                                  <---------AHL20(2)                                                                               --------->AHL20(2)                                                                               <---------AHL20(2)                                                                              <---------AHL20(2)                                                                              <---------AHL20(1)                                                                           <---------ICU4                                                                           <--------HAHB4                                                                        --------->TOE2(3)     <---------YAB1               --------->AHL20(2)                    --------->YAB1  <---------YAB1                ----------->GT1               --------->YAB1  --------->AHL20(2) --------AHL20(1)               --------->ANAC58          ---------->DOF2 <---------YAB1            - --------AHL20(2)               --------->ANAC58   --------->ANAC46    ----------->GT1            <-- ------->AHL20(2)        ========================================MADS_MADS--------->ICU4     <------- ------->AHL20(1)        <---------------AGL15   ----------->RAV1(1) --------->MYB52(1)      <------- -->TEIL              ----------->HVH21          <---------------AGL15<---------TOE2(3)      --------   ttttattagtattgtttcatcgcattgacatatcaagaaaatatacttatcccacaaaatgaaagcataaataacgataattaatttatacatattttat  150900  Previous    Next  AGI:  At2g01290.1    Description:  ribose-5-phosphate isomerase. Identical to Probable ribose-5-phosphate isomerase [Arabidopsis Thaliana] (GB:Q9ZU38); similar to RSW10 (RADIAL SWELLING 10), ribose-5-phosphate isomerase [Arabidopsis thaliana] (TAIR:AT1G71100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21793.1); contains InterPro domain Ribose 5-phosphate isomerase; (InterPro:IPR004788) Range:  from: 148918    to: 150381    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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