Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ATHB12                 ============================HOX2a_HOX2a                                         ----                 ------>ZmHOX2a(1)                                                              <----           ------>ZmHOX2a(1)---------->DOF2                                                     <----           ==================================HOX2a_HOX2a                                        -----   =====================HOX2a_HOX2a  <---------ARR11(3)                            <-----------GT1   ===============HOX2a_HOX2a        --------->ARR11(3)                ----------->GT1         ------   <------ZmHOX2a(2)    --------->YAB1<------ZmHOX2a(2)                <------ZmHOX2a(1)       <-----  <---------ARR11(3)  <---------TOE2(3)                               ----------->GT1        <------NtERF2   acgagatcaactccttctcctatcaaggataaaagagaagatcaactacagtttccaagtatttgtatttggaggataaaaatgtttaccttctcggcat  134100                                                                 <------NtERF2                                                                 --------->At4g35610                                                                 --------->ATERF1(1)                                                                <---------ATERF1(1)   <xxxxxxxxxxxxxxxxsmallRNA(se3)                               <---------ERF1 <---------ANAC46                                               <---------RAP2.3(1) <---------ANAC58                                               ------>NtERF2 <---------At4g35610 <---------ANAC58                            <---------DEAR3(1)<---------ANAC46 ----->KAN4(2)                   --------->HSFC1(2)            <---------DEAR3(1) -----KAN4(1)        <----------DOF2        <---------HSFB2a(2)<---------RAP2.6(2) ------TaMYB80     <----------DOF2     ------>ZmHOX2a(1)       <---------RAP2.3(3) ---->KAN4(1)  <---------DEAR3(1)--------->At4g35610           <---------RAP2.3(2) ---->TaMYB80<---------ANAC58    <---------HSFC1(2)   <<<<<<<<<TBF1  --------->REM1(1) ----KAN4(2) <---------ANAC58 --------->CCA1(2)<------NtERF2  --------->RAP2.6(3)        ---------->DOF2   attccttggagtattgctcggctcttttgaagataagcttcctgttctcggcgttcttcttcttggcggcttcaacattctgcttcttctccaaagccca  134200                                                                                  --------->ANAC58                                                                                  -------->P                                                                                 ------->GAMYB                                                                                --------->MYB46(3)                                                                            <------ZmHOX2a(2)  ------                                                                           --------->ARR14(2)  <-----                                                                           <---------ARR14(2)  <-----                                                                          --------->At4g35610  ------                                                                      =============HOX2a_HOX2a<------                                                                  --------->ARR14(2)          <------                                                                  --------->GLK1(2)       <-------TEIL                                 --------->HSFB2a(2)              <---------ARR14(2)    --------->ARR14(2)                                 <---------HSFB2a(2)        --------->ARR14(2)  <---------MYB55(2)                             ------>MYB83                   <---------ARR14(2)  <---------MYB111(2)                             ------>MYB46(1)            <---------ATHB12  <---------At4g35610 -------              ------>ZmHOX2a(1) <---------LBD16 --------->WRKY38(1)   ------>ZmHOX2a(1) <---------ARR14(2)    ------>ZmHOX2a(1)      --------->DEAR3(1)   --------->WRKY12  <---------ARR11(1)------->GAMYB ------>ZmHOX2a(1)      <---------ALFIN1     --------->TOE2(3)----------------->AG--------->ANAC58 --   ttcctcctctctcttcctcttcttcaacaccgactctggaactacaacctttgactcaaccatttccgaatcctgcagatcaacaacccagattcaatga  134300 --->ATHB12 ---ATHB1 ----ICU4                         ----------->ARR10      <-----------RAV1(1)                       <- --->YAB1                  <---------ZAT14          -------->P <---------At4g35610               ---- ---YAB1                  --------->ALFIN1       <---------MYB52(2)        --------->ANAC58     ----- ---ATHB12              <---------ANAC46     ------>NtERF2 --------->ALFIN1--------->ANAC46  <------NtERF2 -->ICU4---------->DOF2--------->ATHB12      ----------->RAV1(1)           --------->ANAC58 --------- ------->MYB52(1)     <---------YAB1        --------->ANAC46   --------->At4g35610        <---------LBD16   ttaacgacgataaatcgatagatgatgagtggagagaagagactcgacgacactaacctctgtggagctgtaatcgaacgcaatttctcagaggcggaat  134400         <---------O2      <---------DEAR3(1)     <------NtERF2   <---------DEAR3(1)  <---------At4g35610                          --------->AHL20(2)   <------ZmHOX2a(1)  --------->At4g35610                   <------MYB46(1)            <---------At4g35610 --------YAB1                          --------->MYB59             --------->At4g35610 ----->YAB1                            <---------TOE2(3)         <-----------RAV1(2) ---->ICU4                      <-----------------AG   --------->TOE2(2)   <---------MYB52(1) >LBD16  --------->O2 <---------AHL20(2)<------MYB83  *TSS      <------NtERF2       ---------->DOF2 -   tatcagcggcgatgtgagttttatatatatgcttctcaaattaggttaactaaataacctatgggcctcaggagcccgtttacttaaaaagcccatggtt  134500                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                               --------->CCA1(1)                                                               <---------GLK1(1)                  <--           --------->ARR14(2)                                  --------->RVE1(1)              <------           <---------ARR14(2)                          ------->TEIL--------->ANAC46           <------          --------->YAB1                            <---------ANAC46--------->LBD16        --------->AHL20(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <---------ANAC55(2)                    <---------AHL20(1) --------->DOF2                                     --------->ANAC55(2)                   --------->YAB1   tctaaagcccaaggatactaaattctataatcgaaaaactgaaatcgaatggctacgtatcaaaaatatccgaaatataaacacattttcaaaaatatta  134600                                                       --------->ATHB51                                                       --------->ATHB12                                                       -------->HAHB4                                                       <---------ICU4                                                       <--------ATHB1                                                      --------->ICU4                                                  --------->AHL20(2)                                                 --------->AHL20(2)                                                 <---------AHL20(2)                  --------->AHL20(2)         --------->AHL20(2)               <---------ICU4               --------->AHL20(1)              --------->AHL20(2)            <---------AHL20(1)              --------->ICU4                <---------AHL20(2)  --------->MYB52(1)           <---------AHL20(2)            --------->AHL20(2) <-----------GT1     <---------HSFB2a(2)          --------->AHL20(2)  --------->AHL20(2)     --------->HSFB2a(2)         --------->ARR11(3)   <---------ATHB51                     <---------ICU4 <----------DOF2  <---------AHL20(2)  --------->YAB1  <---------AHL20(2)                   --------->YAB1 ---------GT1 <---------AHL20(2) <---------ARR11(3)   <---------YAB1--------->LBD16--------->CCA1(1) ---YAB1  --------->AHL20(2)     --------->AHL20(1)  <---------AHL20(1)   --------->MYB52(1) ---AHL20(2)  <---------ATHB51   <---------AHL20(1) --------->YAB1 --------->ANAC46--------->RVE1(1)   tttctttctagattaaataattaaaaatagttgaaaatatttataaaatatttaaaataattgaactatccgaaaataactgaaaatatccaaaaatgac  134700                                     ---------->DOF2                                    <---------AHL20(2)                               --------->AHL20(1)                               <---------AHL20(1)                               <---------ARR11(3)        --------->ARR14(2)             <---------AHL20(2)--------->ICU4          ----------->GT1           --------->YAB1      --------->ARR11(3) ------->GAMYB                          ----------->GT1  --------->GLK1(2)        --------->LBD16     --------->MYB52(1)                     <---------ARR14(2)  --------->ARR11(3)      --------->ANAC46     <-----------GT1                        --------->ARR14(2)  <---------ARR14(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      --------->YAB1  <---------ARR11(3)   --------->MYB52(1)   --------->YAB1                       --------->GLK1(2)  --------->ARR14(2) --------->HSFB2a(1)   <---------YAB1<---------ARR14(2) ---------->DOF2   cgaaaatctcccaaaataatcgaactatccgaaaatattaaaagtataataaccgagtggatactaaattttaaaaccgaaagaatcagaaccgaaacaa  134800                                                                                                -----                                                                                        --------->ANAC58                                                                                        --------->ANAC46                                                                                        xxxxxxxxxxxxx                                                                                        --------->ANAC58                                                                                       --------->SPL7                                                                                      ------>MYB83                                                            --------->ARR11(3)        ------>MYB46(1)                                                            <---------ARR11(3)        --------->MYB52(1)                                      ---------->DOF2     ------->TEIL              ------->GAMYB        --------->MYB52(1)         ------->GAMYB   ------->GAMYB                 --------->MYB52(1)  --------->YAB1           <----------DOF2      --------->MYB52(1)              <---------GLK1(1)   atattcaaaataactgaatgaatactaaactttataaccgaaaaacccgataaccgaatgaatatatactaaaaccgaatggataaccgaacgccaagtt  134900                                     <---------ICU4                                     --------->YAB1                                      --------->ZAT18                                     -------->ATHB1                                      --------->ZAT14                                    <---------AHL20(2)                           ------>NtERF2                                    --------->ICU4                           --------->AtLEC2                     <---------TOE2(3)  --------->YAB1                    --------->WRKY18(1)        --------->HSFB2a(2)         <---------ATHB51                     <-----------HVH21        <---------HSFB2a(2)<---------ANAC58                              --------->ARR11(3)  <-------  <---------GLK1(2)  <---------TOE1(3) <---------YAB1                   <------MYB46(1)  <---------ZAT14 ---->ATHB12---------->DOF2<---------ANAC58 <---------At4g35610         <------MYB83     <---------ZAT18 xxx>smallRNA(i)   ---------->DOF2  --------->AHL20(2)           --------->MYB52(1) ---------->DOF2   attggattttctaaaaaagattaaaggtttcgagcgaaattattatagctgtttgggatatatagcctaagggaaggtcatgcagccaaagtgaactttc  135000  Previous    Next  AGI:  At2g01250.1    Description:  60S ribosomal protein L7 (RPL7B). Identical to 60S ribosomal protein L7-2 (RPL7B) [Arabidopsis Thaliana] (GB:P60040;GB:O80581;GB:Q42208;GB:Q9ZU42); similar to 60S ribosomal protein L7 (RPL7C) [Arabidopsis thaliana] (TAIR:AT2G44120.2); similar to 60S ribosomal protein L7 (RPL7C) [Arabidopsis thaliana] (TAIR:AT2G44120.1); similar to thaliana 60S ribosomal protein L7 (At2g44120) [Solanum tuberosum] (GB:ABB16984.1); similar to ribosomal protein L7 (GB:1909359B); contains InterPro domain Ribosomal protein L30, N-terminal (InterPro:IPR012988); contains InterPro domain Ribosomal protein L7, eukaryotic; (InterPro:IPR005998); contains InterPro domain Range:  from: 132696    to: 134454    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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