Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                    --------->GLK1(1)                 <---------RAP2.6(3)    <-----------ARR10      <---------At4g35610                       <---------ANAC46 -------->HVH21            --------->ZAT2                 ---------->DOF2 ->GLK1(2)           --------->HSFC1(2)                <-----------HVH21    <------ZmHOX2a(1) -GLK1(2)            <---------HSFC1(2)    <---------ETT(1)     <---------GLK1(1)   <----------DOF2 >ARR10  <---------TOE2(3) --------->At4g35610       --------->MYB46(3) ---------->DOF2   gtgacaaatctaaggtctgaagaagcttcagcttaccgatctcttccgacaatgacccatcaaaggaattgccgtaaaggactagactttggagtccctg  121400                                                          <---------ANAC46                                                        --------->MYB52(1)                      ------->GAMYB                    ----------->HVH21                     --------->DEAR3(1)              --------->ANAC55(2)                     <---------MYB52(2)           <-------TEIL                --------->ANAC58                 --------->CCA1(2)                --------->ANAC46                 --------->GLK1(2)                --------->ANAC58               --------->GLK1(1)        --------->At4g35610                 --------->LBD16              --------->GLK1(1)        ---      --------->DAG2 --------->MYB46(3)    <---------ANAC46       <---------ZAT14                 ---     ---------->DOF2 <---------MYB55(2)   <---------LBD16<-----------------------TaNAC69(2)       ---   aagatggaaaagctgaataggcaacgacccataaaacctattgctccggagattcaagtgacggagactggagagaaaccctagagacgaagggagagaa  121500            <---------ANAC46                <----------DOF2            <---------ANAC58                --------------------->WRI1            <---------ANAC58             <---------ARR11(3)      --------->GLK1(2)                  --------->ARR11(3)     <---------GLK1(2)               --------->LBD16             --------->ANAC46     --------->ARR11(3)            ----------->RAV1(2)           --------->ANAC58     <---------ARR11(3)           ------>MYB83                   --------->ANAC58   --------->ICU4               --------->DEAR3(1)              --------->LBD16 ---------->DOF2                --------->AtMYB61            --------->SPL7         <---------At4g35610 ------>TOE1(3)                 <---------ALFIN1       <-----------GT1              --------->At4g35610 -------->GT1                  --------->MYB46(3) --------->ANAC58       <---------ANAC58 ------>TOE2(3)    --------->ICU4 ------>MYB46(1) --------->ANAC58       <---------ANAC58--------->GLK1(1)   ccgtaaagattcttccttggaatgcttagagacaccaccctgagttctttgcaagttacaccgttccacgaacaggcgttctcgtctgatgagttccaat  121600                                                                              ----------->HVH21                              <----------DOF2                                 <---------YAB1                       --------->DOF5.7(2)          ---------->DOF2         <---------ICU4                 <------ZmHOX2a(2)                --------->ZAT18    --------->ANAC46                <---------ARR11(3)       --------->TOE2(3)           --------->ANAC58                --------->ARR11(3)       --------->TOE1(3)           --------->ANAC58               <------ZmHOX2a(1)       <---------TOE2(3)      ---------->ID1--------->YAB1 --------->ZAT14       --------->GLK1(2) <---------DOF5.7(2)    --------->ZAT18    ---------->DOF2         <---------ZAT14   tgttaagagaacctgtaggatcatcgtgaacgctttgtttaaacgttaagagcgcaaagccttcgtcgtttaagccacttatgacagtcacattgcagag  121700                                                                <---------------------WRI1                                      <-------TEIL           <---------ZAT6  --------->ANAC58                                   <---------At4g35610       --------->ALFIN1--------->ANAC58                            --------->TOE2(3)       ---------->DOF2        ---------->DOF2                         ----------->RAV1(1)  <----------ID1 <-----------RAV1(1)---------->DOF2   --------->MYB52(1) ------>NtERF2--------->At4g35610<----------ID1<----------DOF2   aagagcaacgaagatgatcagcgaggccaacattatcagatgcaaattagaacaaaaagacgagtgttggctttgtacaaagcaaagagagatagtagca  121800                                         --------->ARR14(1)                                        <---------ARR11(3)                              ----------->GT1                             --------->DAG2                            ---------->DOF2                            --------->ZAT14                         ----------->GT1--------->ARR14(2)                     <---------ZAT14    --------->ARR11(3)                  <---------ANAC58      <---------GLK1(2)           ---------->DOF2                  <---------ANAC46      <---------ARR14(2)      ---------->DOF2                  <---------ANAC58    ----------->ARR10     <----------ID1                ---------->DOF2        --------->ARR11(3)  <---------ZAT14  *TSS         --------->DAG2        --------->DAG2    ----------->GT1  --------->ZAT14---------->DOF2      ---------->DOF2       ---------->DOF2   agaagagtgtgatattgatggagtgaagagtaaagtgaaaaagatactctcgttgaagaaaaaggagaaagaaagaatacaaaaagtagagagaaagaga  121900                                                                    ---------->DOF2                <------------CBF                                  ----------->HVH21   --------->ZAT18                                     ---------->DOF2   <---------ZAT14                         ---------->DOF2 ---------->DOF2----------->GT1  xxxxxxxxxxxxxxxx>smallRNA(i)------------------------>ANAC81   ----------->GT1---------->DOF2   gagagagctctgtttttgcattgggagaagagaattaacaaaaaaaaaagaaatgaccaaagaaagaggtgaaagttggagaaaagagaaggccatggcg  122000                                                --------->MYB46(3)                                  -                     --------->ZAT6             <---------MYB52(2)                                  <         --------->ANAC46                       <------------MYB.PH3(2)                      <-------         --------->ANAC58                  ----------->GT1                               <----------DOF2         --------->ANAC58                  --------->YAB1      <-----------GT1  --------->YAB1 <-----        --------->SPL7                  <---------AtLEC2   <----------DOF2     <------ZmHOX2a(2)-----   aagtaatccatacgctaatttgaccactaatctaatgggtttgaatggtaacaaacttaagctttatacagttttgaatcgatcataaaaactttattaa  122100                                                                                 --------->DAG2                                                                       xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                   --------->ZAT18                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                              xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                  xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                  <---------GLK1(2)<---------ZAT18                             <---------------AtSPL8           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <         --------->DAG2      --------------->AtSPL8 xxxxxxxxxxxxxxxx>smallRNA(i)---------->DOF2    -- ---------->GT1          <----------DOF2         <---------At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---------ZAT6    <---------DAG2                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            --- --YAB1 ---------->DOF2  <---------DAG2      <-----------GT1  xxxxxxxxxxxxxxxx>smallRNA(i)       <--- ----AHL20(2)     <----------DOF2     <----------DOF2      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  ----- ----->DOF2    <-----------GT1        <---------DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <----   aagtgttacaaaaagttttacttttagcttttttgtacagcttttttatacagcttcttctaacagttttgcactattccgataaagctaatagcttcag  122200                                               <---------YAB1                                              --------->ARR11(3)                                              <---------ARR11(3)                                    --------->YAB1                                   <---------ATHB12                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      <-------                                  ------>MYB83<---------AHL20(1)                          --------->ARR11(3)                                  ------>MYB46(1)                                         <---------ARR11(3)                                 --------->WOX13(1)                                      <---------RVE1(1)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                       <---------CCA1(1)                             xxxxxxxxxxxxxxxx>smallRNA(s)                                --------->GLK1(1)   ----------->GT1        <---------MYB46(3) <---------CCA1(2)                           --------->RVE1(1) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->ANAC58                                --------->ARR11(3) ------->MYB52(1)      xxxxxxxxxxxxxxxx>smallRNA(s)                                     --------->ARR14(2) -------->HVH21        xxxxxxxxxxxxxxxx>smallRNA(i)                                     <---------ARR11(3) ------MYB52(2)       <----------DOF2   --------->ANAC58                                <---------ARR14(2) ---->At4g35610     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                  ----------->GT1<---------GLK1(1) -----At4g35610    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        ------>ZmHOX2a(1) XXXXXXXXXXXXXXXXXXXX   ctaacaggtaaaaaacttgtccagcttttggttaccaatcagacccaatatctttgtaatctctcctatatacaaaatgttacaaatgcagatatcttta  122300  Previous    Next  AGI:  At2g01210.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G25320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73490.1); similar to hypothetical protein OsI_002131 [Oryza sativa (indica cultivar-group)] (GB:EAY74284.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42197.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leu Range:  from: 119440    to: 121845    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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