Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->DAG2        --------->DAG2       ---------->DOF2   <---------TOE2(3)               <---------ATHB12 ---------->AGL15             ------>MYB46(1) -----------AGL15             ------>MYB83                                                       <--- ----------->AGL1            --------->ANAC46                                                    ---- ----------->AGL2            --------->ANAC58                                       <---------ZAT14 ------------AG              --------->ANAC58                                     --------->ANAC58  < ----------->AGL3           --------->MYB46(3)             --------->MYB52(1)     --------->ANAC58--- ----------->AG       <---------------AtSPL8         <------ZmHOX2a(1)<------NtERF2 --------->ZAT14--   aaattaagaaaaaggtgagagaagggagtaccagccagtcatccaagaggcaagaggagcccaacgagggccagcgagcatagcactccagtagtagaga  104100                                                                          <---------HSFC1(2)                                                                          --------->HSFC1(2)                                                                          --------->MYB46(3)                                                                          --------->HSFB2a(1)                              ------>NtERF2                               <---------HSFB2a(1)                          ------>ZmHOX2a(2)                            <------ZmHOX2a(1)                         --------->GLK1(1)                           --------->ANAC58                         <---------GLK1(1)                           --------->ANAC58               -                         <------ZmHOX2a(2)                        <------NtERF2                     -                        <---------AGP1                           ------>NtERF2                      -                        <---------ARR14(2)                       <---------RAP2.6(3)                <                        --------->ARR14(2)                      --------->RAP2.6(2)                 -         <------MYB83   <-----------ARR10                       <---------ATERF1(2)                 <         <------MYB46(1)--------->ARR14(3)                      --------->DEAR3(1)                 --       <--------P       <---------ARR14(3)                      --------->ATERF1(2)                <-       --------->ALFIN1 <---------ARR11(3)       ------->TEIL   <---------RAP2.6(2)                --    <---------AtMYB61   --------->ARR11(3)     ------->GAMYB   --------->DEAR3(2)                  --  --------->LBD16      <---------CCA1(2)      --------->ANAC58 --------->ATERF1(1)--------->WRKY38(1) ------ABI4(2)      --------->At4g35610       --------->ANAC58 <------NtERF2      <---------ETT(2) -- ----->MYB46(3)     <---------At4g35610     ------>MYB46(1)   --------->ZAT2 ------>MYB83  ---------- ---------LBD16   ==============HOX2a_HOX2a --------->MYB52(1)<---------ATERF1(1) --------->WRKY12<-- ------>AtMYB61   <------ZmHOX2a(1)       --------->MYB46(3) <---------ARR14(2) --------->LBD16   <-- ------->MYB52(1) ===============HOX2a_HOX2a------>MYB83    <------ZmHOX2a(1)------>MYB46(1)     ----   ccaccggaggtagggtaagaggagcagatctcggccatagataacccaacgcacattgtgaaggagccggccaggaaccatccgtagaccagagtgacag  104200      ------->TEIL      --------->ARR14(2)      <---------ARR11(1)      --------->GLK1(2)      <-----------ARR10      <---------ARR14(2)     <---------GLK1(2)     <---------CCA1(2)     <---------ARR14(1)   --------->DEAR3(1)  --------->RAP2.3(1)  <------NtERF2               --------->ALFIN1 --------->LBD16              <---------AtMYB61 ------>NtERF2                <---------ANAC46 -------->DEAR3(1)          <---------MYB46(3) -------->RAP2.3(2)        --------->ALFIN1 -------->RAP2.3(3)        <---------AtMYB61 ---------ATERF1(2)        <---------DEAR3(1) -------->ATERF1(2)      <------MYB83 ---------ANAC46         <------MYB46(1) ------->ORA47(2)       <---------AtMYB61             <---------YAB1 --------RAP2.6(2)      --------->MYB111(1)        <---------ARR14(2) ------->ATERF1(1)   <---------ANAC46        --------->At4g35610 ------->ERF1        <---------REM1(1)       <---------ZAT14 ------->RAP2.3(1)--------->ALFIN1           <---------ABI4(2) ->HVH21--------->YAB1 <--------P            <---------At4g35610                             -------- -------ATERF1(1)<---------MYB52(1)          --------->ZAT18                              --------->LBD16 -------ZAT18   --------->LBD16<---------MYB46(3)  --------->ARR14(2)                 --------->ARR11(3) ----->ALFIN1  <---------DEAR3(1)          <---------ZAT18       <------ZmHOX2a(1)  ----------->ARR10   tgccgccgaatcttaagccggtgttgtaggtggtggtgataccagtgagcaccgatatgatggagaaggagatggcgaaattggagaagaccctgaaatc  104300                                                        <---------TGA1a                                              <---------ANAC58                                              <---------ANAC58                                              <---------ANAC46                                             <---------LBD16         <----------DOF2                                             <-----------------------TaNAC69(2)            <---------At4g35610                                           --------->ALFIN1     ------>ZmHOX2a(2)          --------->ZAT2                                     =============================bZIP_DOF                 <---------ZAT2                       ---------->DOF2  --------->DAG2  --------->TGA1a  <---------At4g35610                       ===========================================bZIP_DOF      <---------ANAC58                     <---------ATHB12---------->DOF2    ========================bZIP_DOF   --------->GLK1(1)               --------->ZAT6    --------->DAG2 <------NtERF2  <------ZmHOX2a(2)<---------ANAC46          --------->At4g35610   ---------->DOF2--------->LBD16--------->ARR11(3)<---------ANAC58 ->GLK1(1)<---------At4g35610   ==================================bZIP_DOF--------->ARR11(3)   taacaattgtttagctaacacaaatcaaagaagaaaaaggaaagagtggcggagacagacgagagatcgcgcttgagctcttgcttgtagccgagctcct  104400                                               <------NtERF2                                              --------->ORA47(1)                                              ------>NtERF2                                              --------->ABI4(1)                                             --------->DEAR3(1)                                             --------->ATERF1(2)                                             --------->RAP2.3(3)                                             --------->RAP2.3(2)                                             --------->RAP2.6(2)                                             <---------ATERF1(2)                                            --------->RAP2.3(1)                                    <-                                            --------->ATERF1(1)                             <-------GAMYB                                            --------->DEAR4(2)                             --------->MYB55(2)                        <---------ANAC46    --------->ERF1                                 --------->MYB111(2)              <------NtERF2                 --------->ORA47(2)                             <---------MYB46(3)             <------NtERF2                 <---------ATERF1(1)                  ---------->DOF2    --             --------->LBD16       ==============HOX2a_HOX2a         <---------ANAC58    <---------ANAC58            --------->RAP2.6(2)    <------ZmHOX2a(1)                 <---------ANAC46    <---------ANAC58           <---------LBD16       <---------TOE2(3)                   <---------ANAC58    <-------GAMYB     <---------ARR14(2)--------->RAP2.6(3)------>ZmHOX2a(2)       ------>ZmHOX2a(1)     <---------MYB46(3)    ------>NtERF2    ----------->TGA1<---------WOX13(1)         ----------->RAV1(2)    <---------AtMYB61    <------NtERF2    ----------->HVH21    ===============================HOX2a_HOX2a <----------DOF2   tgaggcggacttggccggaatccatgacgggaacaaaggattgatcgccgcccaatcccatagtcttcctggcctgagagtccaaagctttggttgttga  104500                                                                                     <---------AHL20(2)                           --------->AHL20(2)                                    --------->AHL20(2)                           <---------AHL20(2)                                   <---------YAB1                       <---------CCA1(1)                                      <---------ICU4                       <---------RVE1(1)          <-----------GT1             --------->YAB1                      <---------AHL20(1)        *TSS                         <---------YAB1                      <---------ARR11(3)      <---------DAG2              <---------AHL20(2)                      --------->ARR11(3)      <----------DOF2             --------->AHL20(2) --------At4g35610  --------->ANAC58       <-----------GT1                <---------YAB1         ---- ------->At4g35610  --------->ANAC58 <---------MYB52(1)                <----------DOF2    <----------DOF2   gagctctctctctgattcagacaagatatttatttttctgttatattactttttacatacccctccaaactgtctttttattattatttattctttaaac  104600                                                               <---------TOE1(3)                                                           --------->TOE1(3)                                                           --------->TOE2(3)                                                          ====================HOX2a_HOX2a                                                          ------>ZmHOX2a(2)                                                          ==============HOX2a_HOX2a                                                         <------ZmHOX2a(2)                                                         ===============HOX2a_HOX2a                                                         =====================HOX2a_HOX2a                                                 ----------->GT1      --------->TOE2(3)                --------->ANAC58                 <---------MYB46(3)   --------->TOE1(3)                --------->ANAC55(2)             <---------ATHB12 <------ZmHOX2a(1)                --------->ANAC46            ------------>CBF   <---------TOE2(3)         <---------AHL20(2)                ------->GAMYB<---------ARR14(2)       <---------ANAC55(2)                 --------->TOE2(3)------>ZmHOX2a(1)       --------->ANAC55(2)           --------->ANAC46   <---------ARR11(3)              --------->AHL20(2) <---------AHL20(2)                  --------->ANAC58   --------->ARR11(3)    --------->HSFB2a(1) --------->AHL20(2)    ----------->TBP   -------->P     --------->ARR14(2)    <---------HSFB2a(1) ----->AHL20(2) --------->ANAC58     --------->ANAC58 ----------->ARR10------>ZmHOX2a(1)<---------AHL20(2)   taaataaatatgtaattcaagtaatataaaaaaactaataagcaaccccaatggttaagatccttaaggaatccttaagaattttctaatataaattttg  104700                                                --------------->AGL15                                                <---------------AGL15                   --------->ARR11(3)                                               ----------------->AGL3                   --------->AHL20(1)                                               ----------------->AGL2                   <---------AHL20(1)                                         <-------TEIL                 <----------ID1  <---------ARR11(3)                                     <---------ARR11(3)     --------->ICU4            --------->AHL20(1)                                     --------->AHL20(1)    --------->GLK1(1)          <---------AHL20(1)              <------ZmHOX2a(1)      --------->ARR11(3)    <---------GLK1(1)          --------->ARR11(3)     ---------->DOF2                 <---------AHL20(1)  <------ZmHOX2a(1)     ----------->GT1  --------->YAB1                    --------->YAB1  --------->YAB1  ---------->DOF2--------->AHL20(2)   acaaatataaagctaaggactagcttagggactctcaaaaatattcatgtccaatagtaggaattcttaagaaagacaaatttgaaaaaatattttggta  104800                     ---------->DOF2                 ---------->DOF2            <---------ANAC58            <---------ANAC46                                    <---------YAB1            <---------ANAC58                             <-------TEIL         <---------WOX13(1)                     --------->AHL20(2)       <<<<<<<<<RAP2.2          <----------ID1  <---------AHL20(1)                           --------      <---------TOE2(3)   --------->CCA1(2)     <---------AHL20(2)            <---------YAB1<-------TEIL   tttgagtttagattgcttgaaaagaaagatagagaagacaaactatacaaaaaatttgatacatttttgataaacacattttgaataacaaagattcatg  104900                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                     <---------ARR11(3)           ---------->DOF2                                                           <---------GLK1(2)     <---------ICU4                                                                  --------->ARR11(3)    --------->ICU4                                                                  <xxxxxxxxxxxxxxxx  --------->YAB1                                                               <---------HSFB2a(2) --------->AHL20(2)       --------->ATHB12                                     --------->HSFB2a(2)  < ->YAB1<----------ID1    <-------TEIL     ---------->DOF2                 ------>ZmHOX2a(1)         <   acaataaatatgacaaagtatacaagattcatttgaaaacatatcaaagacaaaaactatacaaaaaaacatcatcctcttcttgaagatactcagaaca  105000  Previous    Next  AGI:  At2g01170.1    Description:  amino acid permease family protein. similar to CAT3 (CATIONIC AMINO ACID TRANSPORTER 3), cationic amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G36940.1); similar to hypothetical protein OsI_002745 [Oryza sativa (indica cultivar-group)] (GB:EAY74898.1); similar to hypothetical protein OsJ_002461 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12636.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42207.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293); contains InterPro domain Amino aci Range:  from: 102193    to: 104548    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g01175.1    Description:  unknown protein Range:  from: 104883    to: 106215    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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