Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------AHL20(2)                --------->AHL20(2)               --------->YAB1                                                        --------->YAB1               <---------AHL20(2)                                                 --------->WOX13(1)               --------->AHL20(2)     --------->ARR11(3)                       --------->ARR11(3)         ----------->GT1              <---------ARR11(3)                    <---------ICU4          -      --------->YAB1                --------->ICU4           --------->ANAC58  <---------ARR11(3)  --    --------->AHL20(2)     --------->CCA1(2)        --------->ATHB12        --------->YAB1   -------- --------->AHL20(1)      --------->YAB1 ------>ZmHOX2a(2)    --------->ANAC58 --------->CCA1(1)    -- --->GT1 --------->YAB1<---------WOX13(1)    <------ZmHOX2a(1)              --------->AHL20(2)     --   aaacatattaatagtaattaaaatgaatgatatgagccatgatcttaggactaaacattgggcatgctaaattgctaataatatctatcacaagaagaag  100200                                        <---------YAB1                                     <---------YAB1                                   --------->YAB1                                  <---------YAB1                                  --------->ICU4                                 <---------WOX13(1)                                <---------ICU4                                 --------->ATHB12                               <------ZmHOX2a(2)                               <------------ATHB5                               <---------YAB1                                  <--------ATHB1                              --------->ARR11(3)                               -------->ATHB1     ---------->DOF2          <---------ARR11(3)                              --------->ICU4 ---------->RAV1(1)       ---------->DOF2                     <---------TOE2(3)<---------ICU4 ------->ANAC58         <---------YAB1  --------->ICU4     <----------DOF2    <---------ATHB12 -->DOF2              --------->YAB1 --------->ICU4     --------------->AGL15 <---------ATHB51 ------->ANAC58      <------ZmHOX2a(2)--------->YAB1    <---------------AGL15 <---------YAB1 ------->ANAC46      --------->ICU4<---------ICU4    <-----------GT1 ---------->DOF2   cgcgacacaaaggaatagatgcgatcatgaaagatcattatgatgattcagtgtttttcttctttaggttctaaagctcaatgattgaaggcctctgtaa  100300           <----------DOF2                             --------->MYB46(3)       <------MYB83                                --------->At4g35610       <------MYB46(1)                   --------->CCA1(2)                                   <-------      --------->MYB59                   --------->ARR11(3)  ----------->RAV1(1)        <----------DOF2      <---------AtMYB61     --------->At4g35610  --------->YAB1           --------->WOX13(1) --------  <---------YAB1      ---------->DOF2   <---------ARR11(3) --------->MYB46(3)    <---------ICU4   <--   aattttgtttggtctttggagatagaaaggagcttagatagagatatgaaatcagcatccaacaacattttagagtcattcaattttgactttagtatct  100400                                                                                       --------->DAG2                                                                                  ------>NtERF2                                                                                <---------DEAR3(1)      ---------->DOF2                                                         <---------ANAC58     <---------ATHB12        ---------->DOF2                     --------->AHL20(2)   ---------->DOF2   XXXXXXXXXXXXXXXXXXXX>MIR862-5P   ----------->GT1           --------->YAB1  <---------ANAC58 --ARR11(3)        <---------MYB46(3)                        <---------YAB1   <---------ANAC46 ->ARR11(3)       --------->ALFIN1---------->DOF2          --------->YAB1    <---------LBD16        - --------DOF2   <-----------RAV1(1)--------->DAG2         <-------TEIL      --------->MYB52(1)     --   ctttccaataaaccgaaaatgtgggtgagaataaagaaaagtgaaatgttttgggtcatattcatcataaaatgcaaatagcggggcgaaaagtatgaag  100500                                                                   <-------MYC3                                                                   ------->MYC3                                                                   -------->ABF1                                                                   <-------MYC2                                                                   <-------MYC4                                                                   ------->MYC4                                                                   ------->PIF5                                                                   <-------PIF5                                                                  ===================================                                                                  <---------TGA1a                                                                  --------->TGA1a                                                                  --------->ANAC46                                                                  <---------ANAC55(2)                                                                  --------->ANAC55(2)                                                                  <---------O2                                                         --------->TCP15(2)                                                         --------->TCP23                                                        <---------TCP15(1)                                                        <---------TCP20<---------ANAC58                                                        --------->PCF2 <---------ANAC46                                                       --------->TCP15(1)                                                       <-----------HVH21    <-----------HVH21                                                 <---------AHL20(2)------->MYC2            --------->DAG2                       <---------ATHB51 --------->O2           ---------->DOF2                --------->ANAC58      <---------ALFIN1                   --        <----------ID1    ---------->DOF2 --------->ANAC58   --------->ANAC46                      <-      --------->MYB52(1)  ==================================================bZIP_DOF              --- ---------->GT1     ---------->DOF2     ====================================bZIP_DOF <<<<<<<<<TBF1--- --------->GT1 <------ZmHOX2a(1)        ---------->DOF2<---------PCF2  <---------ANAC58 <<<<<<<<<TBF1   atgggaaaaaacgaaaaggactgaaagtgaaagggcttaaccaaaagcaaaataatgggtcccacaacacgtggcctgtgtcatttcttcttcttctcca  100600              ---------->DOF2           >>>>>>>>>TBF1    ---------->DOF2--------->CCA1(2) ==============bZIP_DOF ------------->AGL15                 <---------ARR14(2) --------------AGL15                 --------->ARR14(2)          ---------->DOF2 -------------->AGL2       <-------TEIL                    --------->ANAC58 -------------->AGL3    --------->At4g35610     *TSS       --------->ANAC58   tccatataaagaagaagaaagagatgagatgcaaggtagtatatgcagcaagaacaacaacaagaaccaaagtaacaaaaacaatctctaaaaccatatc  100700                           <-----------HVH21                        <---------ANAC58                        --------->O2                        <---------bZIP60(2)                        <---------TGA1a                        <---------O2 <-------TEIL                        --------->TGA1a                                                   <---------MYB52(1)                        <---------ANAC46       <---------ATHB12                      <-----------HVH21                      ------>NtERF2 --------->ARR14(1)                              =================                     ----------->HVH21   <------ZmHOX2a(2)                          <---------TGA1a                     --------->DEAR3(1)  ===============================HOX2a_HOX2a --------->ANAC58               --------->ZAT2      <---------ARR14(2)                               --------->ANAC58               <---------At4g35610 <---------GLK1(2)                    <----------DOF2--------->SPL7               <---------ZAT2  <---------At4g35610                      ======================bZIP_DOF               --------->At4g35610 --------->ARR14(2)             --------->ANAC58  --------->O2             <---------WRKY12--------->bZIP60(1)                  --------->ANAC46  <---------O2           <-----------HVH21 <---------bZIP60(1)                  --------->ANAC58  --------->TGA1a      <---------REM1(2) <---------ANAC58 --------->PCF2          ------>ZmHOX2a(1)  --------->bZIP60(2)   aatgggactacaaggtcagctctccgacgtgtcatcagattcgatcccactgatgctactggctctcctcgcaactttcttcagacacgtccggtctctt  100800                                                              <---------ZAT2                                                         --------->ORA47(1)                                                         ------>NtERF2                                                        <---------ETT(1)                                                        ----------->HVH21                                                        --------->DEAR3(1)                         --                       <---------MYB46(3)              --------->DEAR3(2)            --------->TOE1(1)                      <---------MYB52(1)             --------->ANAC46                --------->TOE2(1)                     <-------GAMYB                  ------>ZmHOX2a(1)  ---------->DOF2            <--                   <------NtERF2                <---------ZAT18      --------->TOE2(3)  --------->SPL7            ----------->RAV1(2)               <---------At4g35610    --------->TOE1(3)<---------SPL7            --------->At4g35610               --------->At4g35610    <---------MYB59<---------HSFB2a(2)            <---------At4g35610             ---------->CDC5   --------->ZAT2        --------------->AtSPL3 ------>ZmHOX2a(1)------>NtERF2           --------->TOE2(3)   --------->At4g35610   <---------------AtSPL3 ============================MYC_MYB      --------->TOE1(3)   <---------At4g35610   --------->HSFB2a(2)   ctcctcttcccttcttctgcccccgttgttgttgttacttcaaacctcagcgtcctcgccgaccagctcaacctaaatcgcctcttctcgtaccgctact  100900                                                                                      --------->HSFB2a(2)                                                                                      <---------HSFB2a(2)                                                                               --------->ANAC58                                                                               --------->bZIP60(2)                                                                               <---------TGA1a                                                                               --------->ANAC58           --------->At4g35610                                                 --------->TGA1a        ------>NtERF2                                                          --------->O2       --------->DEAR3(1)                                                      --------->ANAC55(2)     ------->GAMYB                                                             <---------ANAC55(2)    --------->ANAC46                                     --------->ALFIN1      <---------O2 ---->NtERF2 ----------->HVH21                 --------->LBD16              <---------ARR14(2) -------ETT(1)        <---------ANAC46       <---------LBD16 <------ZmHOX2a(1) --------->ANAC55(1)   ccgacaacgcagcctctgactgcatcgtgtgtctgtctaaactcaagaccggagaagaagtgaggaagctagattgcagacacgtcttccataagcagtg  101000                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                              <---------GLK1(1)                                              --------->GLK1(1)                                             <---------ARR11(3)                                             <---------ARR14(3)                                             --------->ARR14(3)                                             --------->ARR11(3)          ----------->HVH21                                             <---------AGP1        --------->YAB1                                             <---------ARR14(2)    <---------ICU4        <---------ANAC46                                             --------->ARR14(2)   <---------YAB1         <---------ANAC58                         --------->TOE2(3)  <---------CCA1(2)   <---------ICU4           <---------ANAC58                 <---------ARR11(3) <------NtERF2               --------->YAB1      ----------->HVH21             --------->REM1(1)    <---------ZAT18          --------->TOE2(3)<---------bZIP60(2) -----   tttggaaggctggcttcaacatctcaacttcaattgcccgctctgtagatctccattgctacctcatcatcatcagggacatggcagtgatgcgtcgatc  101100  Previous    Next  AGI:  At2g01150.1    Description:  RHA2B (RING-H2 FINGER PROTEIN 2B); protein binding / zinc ion binding. Identical to RING-H2 zinc finger protein RHA2b (RHA2B) [Arabidopsis Thaliana] (GB:Q9ZU51); similar to RHA2A (RING-H2 finger A2A), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G15100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42212.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 100648    to: 101494    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version